RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 RBM45Q8IUH3 476 aaKnown RBP2.62□□□□□ -1.99
CASC4-206ENST00000558847 SPANXA2-OT1Q8N9U9 137 aa2.62□□□□□ -1.99
CASC4-206ENST00000558847 CYB561A3Q8NBI2 242 aa2.62□□□□□ -1.99
CASC4-206ENST00000558847 NDNFQ8TB73 568 aa2.62□□□□□ -1.99
CASC4-206ENST00000558847 ESR2Q92731 530 aa2.62□□□□□ -1.99
CASC4-206ENST00000558847 NEURL3Q96EH8 262 aa2.62□□□□□ -1.99
CASC4-206ENST00000558847 GABRG3Q99928 467 aa2.62□□□□□ -1.99
CASC4-206ENST00000558847 UTP23Q9BRU9 249 aaKnown RBP2.62□□□□□ -1.99
CASC4-206ENST00000558847 TBL1XR1Q9BZK7 514 aa2.62□□□□□ -1.99
CASC4-206ENST00000558847 RAB1BQ9H0U4 201 aa2.62□□□□□ -1.99
CASC4-206ENST00000558847 PRORYQ9H606 182 aa2.62□□□□□ -1.99
CASC4-206ENST00000558847 FBXO6Q9NRD1 293 aaPredicted RBP2.62□□□□□ -1.99
CASC4-206ENST00000558847 CHMP5Q9NZZ3 219 aa2.62□□□□□ -1.99
CASC4-206ENST00000558847 S4R3C0 116 aa2.62□□□□□ -1.99
CASC4-206ENST00000558847 IGLV2-18A0A075B6J9 118 aa2.61□□□□□ -1.99
CASC4-206ENST00000558847 J3QT63 122 aa2.61□□□□□ -1.99
CASC4-206ENST00000558847 YKT6O15498 198 aa2.61□□□□□ -1.99
CASC4-206ENST00000558847 CCDC22O60826 627 aa2.61□□□□□ -1.99
CASC4-206ENST00000558847 ZMPSTE24O75844 475 aa2.61□□□□□ -1.99
CASC4-206ENST00000558847 RBBP9O75884 186 aa2.61□□□□□ -1.99
CASC4-206ENST00000558847 OR4Q2P0C623 313 aa2.61□□□□□ -1.99
CASC4-206ENST00000558847 HLA-GP17693 338 aa2.61□□□□□ -1.99
CASC4-206ENST00000558847 PRKACBP22694 351 aa2.61□□□□□ -1.99
CASC4-206ENST00000558847 MPIP34949 423 aa2.61□□□□□ -1.99
CASC4-206ENST00000558847 OR12D2P58182 307 aa2.61□□□□□ -1.99
CASC4-206ENST00000558847 VSNL1P62760 191 aa2.61□□□□□ -1.99
CASC4-206ENST00000558847 TNNC1P63316 161 aa2.61□□□□□ -1.99
CASC4-206ENST00000558847 DMC1Q14565 340 aa2.61□□□□□ -1.99
CASC4-206ENST00000558847 FBXL19-AS1Q494R0 122 aa2.61□□□□□ -1.99
CASC4-206ENST00000558847 TTC32Q5I0X7 151 aa2.61□□□□□ -1.99
CASC4-206ENST00000558847 UGT2A3Q6UWM9 527 aa2.61□□□□□ -1.99
CASC4-206ENST00000558847 SSX6Q7RTT6 188 aa2.61□□□□□ -1.99
CASC4-206ENST00000558847 ZNF645Q8N7E2 425 aa2.61□□□□□ -1.99
CASC4-206ENST00000558847 SLC25A29Q8N8R3 303 aa2.61□□□□□ -1.99
CASC4-206ENST00000558847 APCDD1LQ8NCL9 501 aa2.61□□□□□ -1.99
CASC4-206ENST00000558847 OR2Z1Q8NG97 314 aa2.61□□□□□ -1.99
CASC4-206ENST00000558847 RILPQ96NA2 401 aa2.61□□□□□ -1.99
CASC4-206ENST00000558847 CIB1Q99828 191 aa2.61□□□□□ -1.99
CASC4-206ENST00000558847 CTRCQ99895 268 aa2.61□□□□□ -1.99
CASC4-206ENST00000558847 PDCD1LG2Q9BQ51 273 aa2.61□□□□□ -1.99
CASC4-206ENST00000558847 TIMM29Q9BSF4 260 aa2.61□□□□□ -1.99
CASC4-206ENST00000558847 COPS4Q9BT78 406 aa2.61□□□□□ -1.99
CASC4-206ENST00000558847 TMED9Q9BVK6 235 aa2.61□□□□□ -1.99
CASC4-206ENST00000558847 GOLPH3Q9H4A6 298 aa2.61□□□□□ -1.99
CASC4-206ENST00000558847 ZSCAN16Q9H4T2 348 aaPredicted RBP2.61□□□□□ -1.99
CASC4-206ENST00000558847 PLEKHF2Q9H8W4 249 aa2.61□□□□□ -1.99
CASC4-206ENST00000558847 ZNF302Q9NR11 478 aa2.61□□□□□ -1.99
CASC4-206ENST00000558847 SDHAF2Q9NX18 166 aa2.61□□□□□ -1.99
CASC4-206ENST00000558847 MYO10Q9HD67 2058 aa2.61□□□□□ -1.99
CASC4-206ENST00000558847 TNS2Q63HR2 1409 aa2.6□□□□□ -1.99
CASC4-206ENST00000558847 ZNF608Q9ULD9 1512 aaPredicted RBP2.6□□□□□ -1.99
CASC4-206ENST00000558847 A0A0G2JMP0 313 aa2.6□□□□□ -1.99
CASC4-206ENST00000558847 A0A0X1KG70 313 aa2.6□□□□□ -1.99
CASC4-206ENST00000558847 NDUFS5O43920 106 aa2.6□□□□□ -1.99
CASC4-206ENST00000558847 NEMFO60524 1076 aa2.6□□□□□ -1.99
CASC4-206ENST00000558847 PRB2P02812 416 aaPredicted RBP2.6□□□□□ -1.99
CASC4-206ENST00000558847 SNRPAP09012 282 aaKnown RBP2.6□□□□□ -1.99
CASC4-206ENST00000558847 CCL2P13500 99 aa2.6□□□□□ -1.99
CASC4-206ENST00000558847 RANBP1P43487 201 aa2.6□□□□□ -1.99
CASC4-206ENST00000558847 GALR1P47211 349 aa2.6□□□□□ -1.99
CASC4-206ENST00000558847 TAS2R43P59537 309 aa2.6□□□□□ -1.99
CASC4-206ENST00000558847 DYNC1I2Q13409 638 aaKnown RBP2.6□□□□□ -1.99
CASC4-206ENST00000558847 USF2Q15853 346 aaPredicted RBP2.6□□□□□ -1.99
CASC4-206ENST00000558847 C18orf21Q32NC0 220 aaPredicted RBP2.6□□□□□ -1.99
CASC4-206ENST00000558847 LCE1CQ5T751 118 aa2.6□□□□□ -1.99
CASC4-206ENST00000558847 LCE1BQ5T7P3 118 aa2.6□□□□□ -1.99
CASC4-206ENST00000558847 RESP18Q5W5W9 173 aa2.6□□□□□ -1.99
CASC4-206ENST00000558847 IGFL3Q6UXB1 125 aa2.6□□□□□ -1.99
CASC4-206ENST00000558847 HMGN2P46Q86SG4 172 aa2.6□□□□□ -1.99
CASC4-206ENST00000558847 SETD3Q86TU7 594 aaPredicted RBP2.6□□□□□ -1.99
CASC4-206ENST00000558847 NELFCDQ8IXH7 590 aa2.6□□□□□ -1.99
CASC4-206ENST00000558847 ORMDL3Q8N138 153 aa2.6□□□□□ -1.99
CASC4-206ENST00000558847 OR51Q1Q8NH59 317 aa2.6□□□□□ -1.99
CASC4-206ENST00000558847 DEDD2Q8WXF8 326 aa2.6□□□□□ -1.99
CASC4-206ENST00000558847 CCDC124Q96CT7 223 aaKnown RBP2.6□□□□□ -1.99
CASC4-206ENST00000558847 FRMD8P1Q9BZ68 369 aaPredicted RBP2.6□□□□□ -1.99
CASC4-206ENST00000558847 TSGA10Q9BZW7 698 aa2.6□□□□□ -1.99
CASC4-206ENST00000558847 AGPAT3Q9NRZ7 376 aa2.6□□□□□ -1.99
CASC4-206ENST00000558847 TMEM100Q9NV29 134 aa2.6□□□□□ -1.99
CASC4-206ENST00000558847 NLE1Q9NVX2 485 aaPredicted RBP2.6□□□□□ -1.99
CASC4-206ENST00000558847 STMN3Q9NZ72 180 aa2.6□□□□□ -1.99
CASC4-206ENST00000558847 PRO0628Q9UI54 55 aa2.6□□□□□ -1.99
CASC4-206ENST00000558847 FARSAQ9Y285 508 aaKnown RBP2.6□□□□□ -1.99
CASC4-206ENST00000558847 PPIL1Q9Y3C6 166 aa2.6□□□□□ -1.99
CASC4-206ENST00000558847 ORC6Q9Y5N6 252 aa2.6□□□□□ -1.99
CASC4-206ENST00000558847 ENPP4Q9Y6X5 453 aa2.6□□□□□ -1.99
CASC4-206ENST00000558847 TMEM72A0PK05 275 aa2.59□□□□□ -1.99
CASC4-206ENST00000558847 K7ERQ8 282 aa2.59□□□□□ -1.99
CASC4-206ENST00000558847 NELFEP18615 380 aaKnown RBP2.59□□□□□ -1.99
CASC4-206ENST00000558847 CD9P21926 228 aa2.59□□□□□ -1.99
CASC4-206ENST00000558847 SPAM1P38567 509 aa2.59□□□□□ -1.99
CASC4-206ENST00000558847 MPV17P39210 176 aa2.59□□□□□ -1.99
CASC4-206ENST00000558847 SLC18A1P54219 525 aa2.59□□□□□ -1.99
CASC4-206ENST00000558847 HADHBP55084 474 aaKnown RBP2.59□□□□□ -1.99
CASC4-206ENST00000558847 TSPAN5P62079 268 aa2.59□□□□□ -1.99
CASC4-206ENST00000558847 XIAPP98170 497 aa2.59□□□□□ -1.99
CASC4-206ENST00000558847 PSG3Q16557 428 aa2.59□□□□□ -1.99
CASC4-206ENST00000558847 ATP6AP1LQ52LC2 224 aa2.59□□□□□ -1.99
CASC4-206ENST00000558847 KDM4DQ6B0I6 523 aa2.59□□□□□ -1.99
CASC4-206ENST00000558847 FAHD1Q6P587 224 aa2.59□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms