RNA–Protein interactions for RNA: ENST00000558561.1

SPG11-211, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-211ENST00000558561 AQP6Q13520 282 aa3.54□□□□□ -1.84
SPG11-211ENST00000558561 GK2Q14410 553 aaPredicted RBP3.54□□□□□ -1.84
SPG11-211ENST00000558561 BAK1Q16611 211 aa3.54□□□□□ -1.84
SPG11-211ENST00000558561 PCK2Q16822 640 aa3.54□□□□□ -1.84
SPG11-211ENST00000558561 GLYATL3Q5SZD4 288 aa3.54□□□□□ -1.84
SPG11-211ENST00000558561 PRAMEF6Q5VXH4 476 aa3.54□□□□□ -1.84
SPG11-211ENST00000558561 FAHD1Q6P587 224 aa3.54□□□□□ -1.84
SPG11-211ENST00000558561 CLEC2AQ6UVW9 174 aa3.54□□□□□ -1.84
SPG11-211ENST00000558561 PLEKHG7Q6ZR37 379 aa3.54□□□□□ -1.84
SPG11-211ENST00000558561 SHFQ7M4L6 423 aa3.54□□□□□ -1.84
SPG11-211ENST00000558561 SSX6Q7RTT6 188 aa3.54□□□□□ -1.84
SPG11-211ENST00000558561 GLCCI1Q86VQ1 547 aa3.54□□□□□ -1.84
SPG11-211ENST00000558561 ERI1Q8IV48 349 aaKnown RBP3.54□□□□□ -1.84
SPG11-211ENST00000558561 TIGD4Q8IY51 512 aa3.54□□□□□ -1.84
SPG11-211ENST00000558561 TCEANCQ8N8B7 351 aa3.54□□□□□ -1.84
SPG11-211ENST00000558561 TEX45Q8NA69 505 aa3.54□□□□□ -1.84
SPG11-211ENST00000558561 BHLHE23Q8NDY6 225 aa3.54□□□□□ -1.84
SPG11-211ENST00000558561 PROKR2Q8NFJ6 384 aa3.54□□□□□ -1.84
SPG11-211ENST00000558561 GJC3Q8NFK1 279 aa3.54□□□□□ -1.84
SPG11-211ENST00000558561 OR2Z1Q8NG97 314 aa3.54□□□□□ -1.84
SPG11-211ENST00000558561 OR10AD1Q8NGE0 317 aa3.54□□□□□ -1.84
SPG11-211ENST00000558561 OR1J2Q8NGS2 313 aa3.54□□□□□ -1.84
SPG11-211ENST00000558561 OR5K1Q8NHB7 308 aa3.54□□□□□ -1.84
SPG11-211ENST00000558561 ST7LQ8TDW4 575 aa3.54□□□□□ -1.84
SPG11-211ENST00000558561 TMEM170AQ8WVE7 144 aa3.54□□□□□ -1.84
SPG11-211ENST00000558561 CCL17Q92583 94 aa3.54□□□□□ -1.84
SPG11-211ENST00000558561 SLAMF6Q96DU3 332 aa3.54□□□□□ -1.84
SPG11-211ENST00000558561 DUS3LQ96G46 650 aaKnown RBP3.54□□□□□ -1.84
SPG11-211ENST00000558561 LYZL4Q96KX0 146 aa3.54□□□□□ -1.84
SPG11-211ENST00000558561 IL4I1Q96RQ9 567 aa3.54□□□□□ -1.84
SPG11-211ENST00000558561 TEAD3Q99594 435 aa3.54□□□□□ -1.84
SPG11-211ENST00000558561 PITX2Q99697 317 aa3.54□□□□□ -1.84
SPG11-211ENST00000558561 APOL4Q9BPW4 351 aa3.54□□□□□ -1.84
SPG11-211ENST00000558561 ABHD6Q9BV23 337 aa3.54□□□□□ -1.84
SPG11-211ENST00000558561 BCL2L14Q9BZR8 327 aa3.54□□□□□ -1.84
SPG11-211ENST00000558561 RACGAP1Q9H0H5 632 aa3.54□□□□□ -1.84
SPG11-211ENST00000558561 MMP26Q9NRE1 261 aa3.54□□□□□ -1.84
SPG11-211ENST00000558561 CMC2Q9NRP2 79 aa3.54□□□□□ -1.84
SPG11-211ENST00000558561 SNTG1Q9NSN8 517 aa3.54□□□□□ -1.84
SPG11-211ENST00000558561 UFSP2Q9NUQ7 469 aa3.54□□□□□ -1.84
SPG11-211ENST00000558561 SLCO1C1Q9NYB5 712 aa3.54□□□□□ -1.84
SPG11-211ENST00000558561 DNAJC27Q9NZQ0 273 aa3.54□□□□□ -1.84
SPG11-211ENST00000558561 HSPB7Q9UBY9 170 aa3.54□□□□□ -1.84
SPG11-211ENST00000558561 AP4S1Q9Y587 144 aa3.54□□□□□ -1.84
SPG11-211ENST00000558561 COMMD3-BMI1R4GMX3 469 aa3.54□□□□□ -1.84
SPG11-211ENST00000558561 A0A1B0GW55 424 aa3.53□□□□□ -1.84
SPG11-211ENST00000558561 FAM90A10PA6NDY2 464 aa3.53□□□□□ -1.84
SPG11-211ENST00000558561 CBY3A6NI87 242 aa3.53□□□□□ -1.84
SPG11-211ENST00000558561 E9PQ18 207 aa3.53□□□□□ -1.84
SPG11-211ENST00000558561 G3V2T6 193 aa3.53□□□□□ -1.84
SPG11-211ENST00000558561 DLGAP1O14490 977 aa3.53□□□□□ -1.84
SPG11-211ENST00000558561 PLPP2O43688 288 aa3.53□□□□□ -1.84
SPG11-211ENST00000558561 IDH3BO43837 385 aa3.53□□□□□ -1.84
SPG11-211ENST00000558561 TIMM8AO60220 97 aaPredicted RBP3.53□□□□□ -1.84
SPG11-211ENST00000558561 LMX1BO60663 402 aa3.53□□□□□ -1.84
SPG11-211ENST00000558561 E2F6O75461 281 aa3.53□□□□□ -1.84
SPG11-211ENST00000558561 CRLF1O75462 422 aa3.53□□□□□ -1.84
SPG11-211ENST00000558561 GLCEO94923 617 aa3.53□□□□□ -1.84
SPG11-211ENST00000558561 ALPLP05186 524 aa3.53□□□□□ -1.84
SPG11-211ENST00000558561 TACSTD2P09758 323 aa3.53□□□□□ -1.84
SPG11-211ENST00000558561 DUX4L2P0CJ85 424 aa3.53□□□□□ -1.84
SPG11-211ENST00000558561 DUX4L3P0CJ86 424 aa3.53□□□□□ -1.84
SPG11-211ENST00000558561 DUX4L4P0CJ87 422 aa3.53□□□□□ -1.84
SPG11-211ENST00000558561 DUX4L5P0CJ88 424 aa3.53□□□□□ -1.84
SPG11-211ENST00000558561 DUX4L6P0CJ89 424 aa3.53□□□□□ -1.84
SPG11-211ENST00000558561 DUX4L7P0CJ90 424 aa3.53□□□□□ -1.84
SPG11-211ENST00000558561 COX5BP10606 129 aa3.53□□□□□ -1.84
SPG11-211ENST00000558561 ZNF823P16415 610 aa3.53□□□□□ -1.84
SPG11-211ENST00000558561 ZNF23P17027 643 aa3.53□□□□□ -1.84
SPG11-211ENST00000558561 ADRA2CP18825 462 aa3.53□□□□□ -1.84
SPG11-211ENST00000558561 KITLGP21583 273 aa3.53□□□□□ -1.84
SPG11-211ENST00000558561 CA6P23280 308 aa3.53□□□□□ -1.84
SPG11-211ENST00000558561 ACKR3P25106 362 aa3.53□□□□□ -1.84
SPG11-211ENST00000558561 CRABP1P29762 137 aa3.53□□□□□ -1.84
SPG11-211ENST00000558561 GCH1P30793 250 aa3.53□□□□□ -1.84
SPG11-211ENST00000558561 FMO3P31513 532 aa3.53□□□□□ -1.84
SPG11-211ENST00000558561 IFNGR2P38484 337 aa3.53□□□□□ -1.84
SPG11-211ENST00000558561 GUCA1AP43080 201 aaPredicted RBP3.53□□□□□ -1.84
SPG11-211ENST00000558561 SLC25A1P53007 311 aa3.53□□□□□ -1.84
SPG11-211ENST00000558561 DLX1P56177 255 aa3.53□□□□□ -1.84
SPG11-211ENST00000558561 PCBD1P61457 104 aa3.53□□□□□ -1.84
SPG11-211ENST00000558561 PRB3Q04118 309 aaPredicted RBP3.53□□□□□ -1.84
SPG11-211ENST00000558561 SCRN3Q0VDG4 424 aa3.53□□□□□ -1.84
SPG11-211ENST00000558561 APOFQ13790 326 aa3.53□□□□□ -1.84
SPG11-211ENST00000558561 EIF2B1Q14232 305 aaKnown RBP3.53□□□□□ -1.84
SPG11-211ENST00000558561 HNF4GQ14541 408 aa3.53□□□□□ -1.84
SPG11-211ENST00000558561 ZMYND11Q15326 602 aa3.53□□□□□ -1.84
SPG11-211ENST00000558561 ATP6AP1Q15904 470 aa3.53□□□□□ -1.84
SPG11-211ENST00000558561 SNAPC1Q16533 368 aa3.53□□□□□ -1.84
SPG11-211ENST00000558561 DNAL1Q4LDG9 190 aa3.53□□□□□ -1.84
SPG11-211ENST00000558561 C6orf52Q5T4I8 152 aa3.53□□□□□ -1.84
SPG11-211ENST00000558561 AADACL4Q5VUY2 407 aa3.53□□□□□ -1.84
SPG11-211ENST00000558561 C1orf146Q5VVC0 180 aa3.53□□□□□ -1.84
SPG11-211ENST00000558561 FAM205BPQ63HN1 556 aa3.53□□□□□ -1.84
SPG11-211ENST00000558561 KDM4DQ6B0I6 523 aa3.53□□□□□ -1.84
SPG11-211ENST00000558561 CYB5R2Q6BCY4 276 aa3.53□□□□□ -1.84
SPG11-211ENST00000558561 SHQ1Q6PI26 577 aaKnown RBP3.53□□□□□ -1.84
SPG11-211ENST00000558561 DUX4L9Q6RFH8 374 aaPredicted RBP3.53□□□□□ -1.84
SPG11-211ENST00000558561 LRRN1Q6UXK5 716 aa3.53□□□□□ -1.84
SPG11-211ENST00000558561 C9orf47Q6ZRZ4 202 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms