RNA–Protein interactions for RNA: ENST00000557548.1

TRAV28-201, Transcript of T cell receptor alpha variable 28 (pseudogene), humanhuman

BASIC

Gene TRAV28, Length 323 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV28-201ENST00000557548 WRNQ14191 1432 aaPredicted RBP eCLIP2.23□□□□□ -2.05
TRAV28-201ENST00000557548 TTC37Q6PGP7 1564 aa2.23□□□□□ -2.05
TRAV28-201ENST00000557548 MYO5CQ9NQX4 1742 aa2.22□□□□□ -2.05
TRAV28-201ENST00000557548 DENND4AQ7Z401 1863 aa2.22□□□□□ -2.05
TRAV28-201ENST00000557548 ABCB11O95342 1321 aa2.22□□□□□ -2.05
TRAV28-201ENST00000557548 PREX1Q8TCU6 1659 aa2.22□□□□□ -2.05
TRAV28-201ENST00000557548 SYCE1LA8MT33 242 aa2.22□□□□□ -2.05
TRAV28-201ENST00000557548 SEC14L6B5MCN3 397 aa2.22□□□□□ -2.05
TRAV28-201ENST00000557548 TMEM238C9JI98 176 aa2.22□□□□□ -2.05
TRAV28-201ENST00000557548 H0Y980 276 aa2.22□□□□□ -2.05
TRAV28-201ENST00000557548 M0QZ92 97 aa2.22□□□□□ -2.05
TRAV28-201ENST00000557548 DFFAO00273 331 aa2.22□□□□□ -2.05
TRAV28-201ENST00000557548 PLPP3O14495 311 aa2.22□□□□□ -2.05
TRAV28-201ENST00000557548 SLC31A1O15431 190 aa2.22□□□□□ -2.05
TRAV28-201ENST00000557548 TRAPPC6AO75865 159 aa2.22□□□□□ -2.05
TRAV28-201ENST00000557548 VAMP5O95183 116 aa2.22□□□□□ -2.05
TRAV28-201ENST00000557548 ORM1P02763 201 aa2.22□□□□□ -2.05
TRAV28-201ENST00000557548 ERGP11308 486 aa2.22□□□□□ -2.05
TRAV28-201ENST00000557548 IDO1P14902 403 aa2.22□□□□□ -2.05
TRAV28-201ENST00000557548 KLK2P20151 261 aa2.22□□□□□ -2.05
TRAV28-201ENST00000557548 M6PRP20645 277 aa2.22□□□□□ -2.05
TRAV28-201ENST00000557548 PFN2P35080 140 aa2.22□□□□□ -2.05
TRAV28-201ENST00000557548 CD79BP40259 229 aa2.22□□□□□ -2.05
TRAV28-201ENST00000557548 CTRLP40313 264 aa2.22□□□□□ -2.05
TRAV28-201ENST00000557548 CDKN2BP42772 138 aa2.22□□□□□ -2.05
TRAV28-201ENST00000557548 UBE2E1P51965 193 aa2.22□□□□□ -2.05
TRAV28-201ENST00000557548 AP1S2P56377 157 aa2.22□□□□□ -2.05
TRAV28-201ENST00000557548 ERVS71-1P61550 626 aa2.22□□□□□ -2.05
TRAV28-201ENST00000557548 PRR3P79522 188 aaKnown RBP2.22□□□□□ -2.05
TRAV28-201ENST00000557548 STX4Q12846 297 aa2.22□□□□□ -2.05
TRAV28-201ENST00000557548 SPA17Q15506 151 aa2.22□□□□□ -2.05
TRAV28-201ENST00000557548 TAL2Q16559 108 aa2.22□□□□□ -2.05
TRAV28-201ENST00000557548 METTL21CQ5VZV1 264 aa2.22□□□□□ -2.05
TRAV28-201ENST00000557548 C3orf33Q6P1S2 294 aa2.22□□□□□ -2.05
TRAV28-201ENST00000557548 GSG1LQ6UXU4 331 aa2.22□□□□□ -2.05
TRAV28-201ENST00000557548 BBS7Q8IWZ6 715 aa2.22□□□□□ -2.05
TRAV28-201ENST00000557548 C11orf42Q8N5U0 333 aa2.22□□□□□ -2.05
TRAV28-201ENST00000557548 SUMF2Q8NBJ7 301 aa2.22□□□□□ -2.05
TRAV28-201ENST00000557548 LFNGQ8NES3 379 aa2.22□□□□□ -2.05
TRAV28-201ENST00000557548 OR2L5Q8NG80 312 aa2.22□□□□□ -2.05
TRAV28-201ENST00000557548 OR10W1Q8NGF6 305 aa2.22□□□□□ -2.05
TRAV28-201ENST00000557548 OR51A7Q8NH64 312 aa2.22□□□□□ -2.05
TRAV28-201ENST00000557548 PTH2Q96A98 100 aa2.22□□□□□ -2.05
TRAV28-201ENST00000557548 CREB3L1Q96BA8 519 aa2.22□□□□□ -2.05
TRAV28-201ENST00000557548 RCN3Q96D15 328 aa2.22□□□□□ -2.05
TRAV28-201ENST00000557548 UBE2E2Q96LR5 201 aa2.22□□□□□ -2.05
TRAV28-201ENST00000557548 MBOAT7Q96N66 472 aa2.22□□□□□ -2.05
TRAV28-201ENST00000557548 STACQ99469 402 aa2.22□□□□□ -2.05
TRAV28-201ENST00000557548 EBNA1BP2Q99848 306 aaKnown RBP2.22□□□□□ -2.05
TRAV28-201ENST00000557548 PRRT1Q99946 306 aa2.22□□□□□ -2.05
TRAV28-201ENST00000557548 YTHDF1Q9BYJ9 559 aaKnown RBP2.22□□□□□ -2.05
TRAV28-201ENST00000557548 SLC22A4Q9H015 551 aa2.22□□□□□ -2.05
TRAV28-201ENST00000557548 METTL9Q9H1A3 318 aa2.22□□□□□ -2.05
TRAV28-201ENST00000557548 REEP1Q9H902 201 aa2.22□□□□□ -2.05
TRAV28-201ENST00000557548 EDA2RQ9HAV5 297 aa2.22□□□□□ -2.05
TRAV28-201ENST00000557548 ASCL3Q9NQ33 180 aa2.22□□□□□ -2.05
TRAV28-201ENST00000557548 FBXO8Q9NRD0 319 aa2.22□□□□□ -2.05
TRAV28-201ENST00000557548 TNFRSF19Q9NS68 423 aa2.22□□□□□ -2.05
TRAV28-201ENST00000557548 SDHAF2Q9NX18 166 aa2.22□□□□□ -2.05
TRAV28-201ENST00000557548 ZNF226Q9NYT6 803 aa2.22□□□□□ -2.05
TRAV28-201ENST00000557548 OPN4Q9UHM6 478 aa2.22□□□□□ -2.05
TRAV28-201ENST00000557548 FBXL3Q9UKT7 428 aa2.22□□□□□ -2.05
TRAV28-201ENST00000557548 TFR2Q9UP52 801 aa2.22□□□□□ -2.05
TRAV28-201ENST00000557548 ZNF337Q9Y3M9 751 aa2.22□□□□□ -2.05
TRAV28-201ENST00000557548 UBIAD1Q9Y5Z9 338 aa2.22□□□□□ -2.05
TRAV28-201ENST00000557548 EIF3AQ14152 1382 aaKnown RBP2.22□□□□□ -2.05
TRAV28-201ENST00000557548 EPRSP07814 1512 aaKnown RBP2.22□□□□□ -2.05
TRAV28-201ENST00000557548 UGGT2Q9NYU1 1516 aa2.22□□□□□ -2.05
TRAV28-201ENST00000557548 KDM5BQ9UGL1 1544 aa2.22□□□□□ -2.05
TRAV28-201ENST00000557548 MYO5BQ9ULV0 1848 aa2.21□□□□□ -2.05
TRAV28-201ENST00000557548 KIF14Q15058 1648 aa2.21□□□□□ -2.06
TRAV28-201ENST00000557548 TRAV8-7A0A075B6U6 113 aa2.21□□□□□ -2.06
TRAV28-201ENST00000557548 A0A0A6YYD5 115 aa2.21□□□□□ -2.06
TRAV28-201ENST00000557548 ANKRD20A5PA0PJZ0 165 aa2.21□□□□□ -2.06
TRAV28-201ENST00000557548 FUOMA2VDF0 154 aa2.21□□□□□ -2.06
TRAV28-201ENST00000557548 C9J4A7 227 aa2.21□□□□□ -2.06
TRAV28-201ENST00000557548 FTCDNL1E5RQL4 147 aa2.21□□□□□ -2.06
TRAV28-201ENST00000557548 MAGEB4O15481 346 aaPredicted RBP2.21□□□□□ -2.06
TRAV28-201ENST00000557548 ATP8B1O43520 1251 aa2.21□□□□□ -2.06
TRAV28-201ENST00000557548 CDC40O60508 579 aaKnown RBP eCLIP2.21□□□□□ -2.06
TRAV28-201ENST00000557548 HPGDSO60760 199 aa2.21□□□□□ -2.06
TRAV28-201ENST00000557548 RAB36O95755 333 aa2.21□□□□□ -2.06
TRAV28-201ENST00000557548 PTTG1O95997 202 aa2.21□□□□□ -2.06
TRAV28-201ENST00000557548 CGAP01215 116 aa2.21□□□□□ -2.06
TRAV28-201ENST00000557548 HLA-AP01891 365 aaKnown RBP2.21□□□□□ -2.06
TRAV28-201ENST00000557548 CALB1P05937 261 aa2.21□□□□□ -2.06
TRAV28-201ENST00000557548 SNRPAP09012 282 aaKnown RBP2.21□□□□□ -2.06
TRAV28-201ENST00000557548 ZDHHC11BP0C7U3 371 aa2.21□□□□□ -2.06
TRAV28-201ENST00000557548 UCHL3P15374 230 aa2.21□□□□□ -2.06
TRAV28-201ENST00000557548 CD1EP15812 388 aa2.21□□□□□ -2.06
TRAV28-201ENST00000557548 HIST1H1CP16403 213 aaKnown RBP2.21□□□□□ -2.06
TRAV28-201ENST00000557548 CRISP2P16562 243 aa2.21□□□□□ -2.06
TRAV28-201ENST00000557548 IGFBP3P17936 291 aaPredicted RBP2.21□□□□□ -2.06
TRAV28-201ENST00000557548 WARSP23381 471 aaKnown RBP2.21□□□□□ -2.06
TRAV28-201ENST00000557548 TGFBR2P37173 567 aa2.21□□□□□ -2.06
TRAV28-201ENST00000557548 MAGEA12P43365 314 aa2.21□□□□□ -2.06
TRAV28-201ENST00000557548 PPICP45877 212 aa2.21□□□□□ -2.06
TRAV28-201ENST00000557548 SLCO1A2P46721 670 aa2.21□□□□□ -2.06
TRAV28-201ENST00000557548 HCCSP53701 268 aa2.21□□□□□ -2.06
TRAV28-201ENST00000557548 VSX2P58304 361 aaPredicted RBP2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 98.1 ms