RNA–Protein interactions for RNA: ENST00000557539.1

MTHFD1-216, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-216ENST00000557539 FBXL12Q9NXK8 326 aa3.61□□□□□ -1.83
MTHFD1-216ENST00000557539 CSAG2Q9Y5P2 127 aa3.61□□□□□ -1.83
MTHFD1-216ENST00000557539 HMCN2Q8NDA2 5059 aa3.6□□□□□ -1.83
MTHFD1-216ENST00000557539 A0A0D9SFI3 127 aa3.6□□□□□ -1.83
MTHFD1-216ENST00000557539 SLC22A20A6NK97 555 aa3.6□□□□□ -1.83
MTHFD1-216ENST00000557539 PDZK1P1A8MUH7 402 aa3.6□□□□□ -1.83
MTHFD1-216ENST00000557539 NUPL2O15504 423 aaKnown RBP3.6□□□□□ -1.83
MTHFD1-216ENST00000557539 GMDSO60547 372 aa3.6□□□□□ -1.83
MTHFD1-216ENST00000557539 MPDU1O75352 247 aa3.6□□□□□ -1.83
MTHFD1-216ENST00000557539 ENTPD5O75356 428 aa3.6□□□□□ -1.83
MTHFD1-216ENST00000557539 SERF1AO75920 110 aa3.6□□□□□ -1.83
MTHFD1-216ENST00000557539 AIFM1O95831 613 aa3.6□□□□□ -1.83
MTHFD1-216ENST00000557539 IGHV3-23P01764 117 aa3.6□□□□□ -1.83
MTHFD1-216ENST00000557539 ARG1P05089 322 aa3.6□□□□□ -1.83
MTHFD1-216ENST00000557539 CCL2P13500 99 aa3.6□□□□□ -1.83
MTHFD1-216ENST00000557539 DIO3P55073 304 aa3.6□□□□□ -1.83
MTHFD1-216ENST00000557539 NUTF2P61970 127 aaKnown RBP3.6□□□□□ -1.83
MTHFD1-216ENST00000557539 PSMC5P62195 406 aa3.6□□□□□ -1.83
MTHFD1-216ENST00000557539 CAPRIN1Q14444 709 aaKnown RBP3.6□□□□□ -1.83
MTHFD1-216ENST00000557539 LCN12Q6JVE5 192 aa3.6□□□□□ -1.83
MTHFD1-216ENST00000557539 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.6□□□□□ -1.83
MTHFD1-216ENST00000557539 SLC35D2Q76EJ3 337 aa3.6□□□□□ -1.83
MTHFD1-216ENST00000557539 KIF2BQ8N4N8 673 aa3.6□□□□□ -1.83
MTHFD1-216ENST00000557539 RHOXF1Q8NHV9 184 aa3.6□□□□□ -1.83
MTHFD1-216ENST00000557539 RPUSD4Q96CM3 377 aaKnown RBP3.6□□□□□ -1.83
MTHFD1-216ENST00000557539 RNF170Q96K19 258 aa3.6□□□□□ -1.83
MTHFD1-216ENST00000557539 DNAJC1Q96KC8 554 aaKnown RBP3.6□□□□□ -1.83
MTHFD1-216ENST00000557539 REG4Q9BYZ8 158 aa3.6□□□□□ -1.83
MTHFD1-216ENST00000557539 RAB1BQ9H0U4 201 aa3.6□□□□□ -1.83
MTHFD1-216ENST00000557539 RPF2Q9H7B2 306 aaKnown RBP3.6□□□□□ -1.83
MTHFD1-216ENST00000557539 ZDHHC11Q9H8X9 412 aa3.6□□□□□ -1.83
MTHFD1-216ENST00000557539 ZNF702PQ9H963 129 aa3.6□□□□□ -1.83
MTHFD1-216ENST00000557539 PATZ1Q9HBE1 687 aaKnown RBP3.6□□□□□ -1.83
MTHFD1-216ENST00000557539 MCUBQ9NWR8 336 aa3.6□□□□□ -1.83
MTHFD1-216ENST00000557539 ADA2Q9NZK5 511 aa3.6□□□□□ -1.83
MTHFD1-216ENST00000557539 ADAM22Q9P0K1 906 aa3.6□□□□□ -1.83
MTHFD1-216ENST00000557539 XCL2Q9UBD3 114 aa3.6□□□□□ -1.83
MTHFD1-216ENST00000557539 CLCF1Q9UBD9 225 aa3.6□□□□□ -1.83
MTHFD1-216ENST00000557539 ZNF229Q9UJW7 825 aa3.6□□□□□ -1.83
MTHFD1-216ENST00000557539 SLC25A15Q9Y619 301 aa3.6□□□□□ -1.83
MTHFD1-216ENST00000557539 DENND4CQ5VZ89 1909 aa3.6□□□□□ -1.83
MTHFD1-216ENST00000557539 IGHV5-10-1A0A0J9YXX1 117 aa3.59□□□□□ -1.83
MTHFD1-216ENST00000557539 A0A1B0GVI7 797 aa3.59□□□□□ -1.83
MTHFD1-216ENST00000557539 PSMB11A5LHX3 300 aa3.59□□□□□ -1.83
MTHFD1-216ENST00000557539 PRAMEF26H0Y7S4 382 aa3.59□□□□□ -1.83
MTHFD1-216ENST00000557539 RFXANKO14593 260 aa3.59□□□□□ -1.83
MTHFD1-216ENST00000557539 ICOSLGO75144 302 aa3.59□□□□□ -1.83
MTHFD1-216ENST00000557539 TDP2O95551 362 aa3.59□□□□□ -1.83
MTHFD1-216ENST00000557539 GKN3PP0CG01 181 aa3.59□□□□□ -1.83
MTHFD1-216ENST00000557539 CA5AP35218 305 aa3.59□□□□□ -1.83
MTHFD1-216ENST00000557539 DEKP35659 375 aaKnown RBP3.59□□□□□ -1.83
MTHFD1-216ENST00000557539 CSKP41240 450 aa3.59□□□□□ -1.83
MTHFD1-216ENST00000557539 SERPINB8P50452 374 aa3.59□□□□□ -1.83
MTHFD1-216ENST00000557539 MLF1P58340 268 aa3.59□□□□□ -1.83
MTHFD1-216ENST00000557539 ZNF45Q02386 682 aa3.59□□□□□ -1.83
MTHFD1-216ENST00000557539 AQP6Q13520 282 aa3.59□□□□□ -1.83
MTHFD1-216ENST00000557539 ZNF726P1Q15940 193 aa3.59□□□□□ -1.83
MTHFD1-216ENST00000557539 HIGD2BQ4VC39 106 aa3.59□□□□□ -1.83
MTHFD1-216ENST00000557539 TPRG1LQ5T0D9 272 aa3.59□□□□□ -1.83
MTHFD1-216ENST00000557539 ATAD3CQ5T2N8 411 aa3.59□□□□□ -1.83
MTHFD1-216ENST00000557539 ZNF621Q6ZSS3 439 aa3.59□□□□□ -1.83
MTHFD1-216ENST00000557539 NDUFAF7Q7L592 441 aa3.59□□□□□ -1.83
MTHFD1-216ENST00000557539 PID1Q7Z2X4 250 aa3.59□□□□□ -1.83
MTHFD1-216ENST00000557539 OR2W3Q7Z3T1 314 aa3.59□□□□□ -1.83
MTHFD1-216ENST00000557539 COMTD1Q86VU5 262 aa3.59□□□□□ -1.83
MTHFD1-216ENST00000557539 OR4D6Q8NGJ1 314 aa3.59□□□□□ -1.83
MTHFD1-216ENST00000557539 OR2A1Q8NGT9 310 aa3.59□□□□□ -1.83
MTHFD1-216ENST00000557539 OR2L2Q8NH16 312 aa3.59□□□□□ -1.83
MTHFD1-216ENST00000557539 BAALCQ8WXS3 180 aa3.59□□□□□ -1.83
MTHFD1-216ENST00000557539 TFGQ92734 400 aaPredicted RBP3.59□□□□□ -1.83
MTHFD1-216ENST00000557539 FCRL1Q96LA6 429 aa3.59□□□□□ -1.83
MTHFD1-216ENST00000557539 P2RX4Q99571 388 aa3.59□□□□□ -1.83
MTHFD1-216ENST00000557539 PAXXQ9BUH6 204 aa3.59□□□□□ -1.83
MTHFD1-216ENST00000557539 KIR3DX1Q9H7L2 352 aa3.59□□□□□ -1.83
MTHFD1-216ENST00000557539 SLC25A22Q9H936 323 aa3.59□□□□□ -1.83
MTHFD1-216ENST00000557539 UGT1A7Q9HAW7 530 aa3.59□□□□□ -1.83
MTHFD1-216ENST00000557539 UGT1A8Q9HAW9 530 aa3.59□□□□□ -1.83
MTHFD1-216ENST00000557539 SPACA1Q9HBV2 294 aa3.59□□□□□ -1.83
MTHFD1-216ENST00000557539 SH2D2AQ9NP31 389 aa3.59□□□□□ -1.83
MTHFD1-216ENST00000557539 MDFICQ9P1T7 246 aa3.59□□□□□ -1.83
MTHFD1-216ENST00000557539 CRCT1Q9UGL9 99 aa3.59□□□□□ -1.83
MTHFD1-216ENST00000557539 PRSS21Q9Y6M0 314 aa3.59□□□□□ -1.83
MTHFD1-216ENST00000557539 PHF3Q92576 2039 aaKnown RBP3.59□□□□□ -1.83
MTHFD1-216ENST00000557539 CITO14578 2027 aa3.58□□□□□ -1.84
MTHFD1-216ENST00000557539 FLG2Q5D862 2391 aaPredicted RBP3.58□□□□□ -1.84
MTHFD1-216ENST00000557539 A0A0B4J2A0 478 aa3.58□□□□□ -1.84
MTHFD1-216ENST00000557539 A0A1W2PRF3 423 aa3.58□□□□□ -1.84
MTHFD1-216ENST00000557539 A0A1W2PRM7 423 aa3.58□□□□□ -1.84
MTHFD1-216ENST00000557539 RAD51CO43502 376 aa3.58□□□□□ -1.84
MTHFD1-216ENST00000557539 CCNE2O96020 404 aa3.58□□□□□ -1.84
MTHFD1-216ENST00000557539 STATHP02808 62 aa3.58□□□□□ -1.84
MTHFD1-216ENST00000557539 KLK1P06870 262 aa3.58□□□□□ -1.84
MTHFD1-216ENST00000557539 CSF3P09919 207 aa3.58□□□□□ -1.84
MTHFD1-216ENST00000557539 CT45A6P0DMU7 189 aa3.58□□□□□ -1.84
MTHFD1-216ENST00000557539 CT45A5P0DMU8 189 aa3.58□□□□□ -1.84
MTHFD1-216ENST00000557539 CT45A7P0DMV0 189 aa3.58□□□□□ -1.84
MTHFD1-216ENST00000557539 CSNK2A2P19784 350 aaPredicted RBP3.58□□□□□ -1.84
MTHFD1-216ENST00000557539 GPX4P36969 197 aaPredicted RBP3.58□□□□□ -1.84
MTHFD1-216ENST00000557539 RAB7AP51149 207 aa3.58□□□□□ -1.84
MTHFD1-216ENST00000557539 APOC4P55056 127 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms