RNA–Protein interactions for RNA: ENST00000557427.5

SHMT2-230, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-230ENST00000557427 PNPP00491 289 aa10.63□□□□□ -0.71
SHMT2-230ENST00000557427 ISG15P05161 165 aa10.63□□□□□ -0.71
SHMT2-230ENST00000557427 CCL2P13500 99 aa10.63□□□□□ -0.71
SHMT2-230ENST00000557427 SNRPBP14678 240 aaKnown RBP10.63□□□□□ -0.71
SHMT2-230ENST00000557427 ZNF14P17017 642 aaPredicted RBP10.63□□□□□ -0.71
SHMT2-230ENST00000557427 CDAP32320 146 aa10.63□□□□□ -0.71
SHMT2-230ENST00000557427 SOX2P48431 317 aa10.63□□□□□ -0.71
SHMT2-230ENST00000557427 PITPNAQ00169 270 aa10.63□□□□□ -0.71
SHMT2-230ENST00000557427 SNTB2Q13425 540 aaKnown RBP10.63□□□□□ -0.71
SHMT2-230ENST00000557427 UBE2NLQ5JXB2 153 aa10.63□□□□□ -0.71
SHMT2-230ENST00000557427 OTPQ5XKR4 325 aa10.63□□□□□ -0.71
SHMT2-230ENST00000557427 RHOUQ7L0Q8 258 aa10.63□□□□□ -0.71
SHMT2-230ENST00000557427 SLC16A14Q7RTX9 510 aa10.63□□□□□ -0.71
SHMT2-230ENST00000557427 SYT9Q86SS6 491 aa10.63□□□□□ -0.71
SHMT2-230ENST00000557427 GLCCI1Q86VQ1 547 aa10.63□□□□□ -0.71
SHMT2-230ENST00000557427 ZCCHC24Q8N2G6 241 aaKnown RBP10.63□□□□□ -0.71
SHMT2-230ENST00000557427 NUP37Q8NFH4 326 aa10.63□□□□□ -0.71
SHMT2-230ENST00000557427 OR4M2Q8NGB6 313 aa10.63□□□□□ -0.71
SHMT2-230ENST00000557427 ZNF671Q8TAW3 534 aa10.63□□□□□ -0.71
SHMT2-230ENST00000557427 ZNF75AQ96N20 296 aa10.63□□□□□ -0.71
SHMT2-230ENST00000557427 WACQ9BTA9 647 aa10.63□□□□□ -0.71
SHMT2-230ENST00000557427 C1orf198Q9H425 327 aa10.63□□□□□ -0.71
SHMT2-230ENST00000557427 PLK3Q9H4B4 646 aa10.63□□□□□ -0.71
SHMT2-230ENST00000557427 BRD7Q9NPI1 651 aa10.63□□□□□ -0.71
SHMT2-230ENST00000557427 HIF1ANQ9NWT6 349 aa10.63□□□□□ -0.71
SHMT2-230ENST00000557427 CYB5R1Q9UHQ9 305 aa10.63□□□□□ -0.71
SHMT2-230ENST00000557427 ETV7Q9Y603 341 aa10.63□□□□□ -0.71
SHMT2-230ENST00000557427 A0A1W2PPL8 197 aa10.62□□□□□ -0.71
SHMT2-230ENST00000557427 B4DSR2 109 aa10.62□□□□□ -0.71
SHMT2-230ENST00000557427 CTDSPLO15194 276 aa10.62□□□□□ -0.71
SHMT2-230ENST00000557427 H2BFMP0C1H6 154 aa10.62□□□□□ -0.71
SHMT2-230ENST00000557427 ZNF35P13682 527 aa10.62□□□□□ -0.71
SHMT2-230ENST00000557427 DAOP14920 347 aa10.62□□□□□ -0.71
SHMT2-230ENST00000557427 ACHEP22303 614 aa10.62□□□□□ -0.71
SHMT2-230ENST00000557427 MAGEB1P43366 347 aa10.62□□□□□ -0.71
SHMT2-230ENST00000557427 MAP2K3P46734 347 aa10.62□□□□□ -0.71
SHMT2-230ENST00000557427 MMP16P51512 607 aa10.62□□□□□ -0.71
SHMT2-230ENST00000557427 UBA52P62987 128 aaKnown RBP10.62□□□□□ -0.71
SHMT2-230ENST00000557427 GALK2Q01415 458 aa10.62□□□□□ -0.71
SHMT2-230ENST00000557427 MFGE8Q08431 387 aaPredicted RBP10.62□□□□□ -0.71
SHMT2-230ENST00000557427 MZT2BQ6NZ67 158 aa10.62□□□□□ -0.71
SHMT2-230ENST00000557427 TMEM53Q6P2H8 277 aa10.62□□□□□ -0.71
SHMT2-230ENST00000557427 FOXL2NBQ6ZUU3 175 aa10.62□□□□□ -0.71
SHMT2-230ENST00000557427 LINC00346Q8IVM7 164 aa10.62□□□□□ -0.71
SHMT2-230ENST00000557427 OR10AC1Q8NH08 325 aa10.62□□□□□ -0.71
SHMT2-230ENST00000557427 LGALS14Q8TCE9 139 aa10.62□□□□□ -0.71
SHMT2-230ENST00000557427 TSEN15Q8WW01 171 aaKnown RBP10.62□□□□□ -0.71
SHMT2-230ENST00000557427 TMEM106AQ96A25 262 aa10.62□□□□□ -0.71
SHMT2-230ENST00000557427 TMEM186Q96B77 213 aa10.62□□□□□ -0.71
SHMT2-230ENST00000557427 ORAI1Q96D31 301 aa10.62□□□□□ -0.71
SHMT2-230ENST00000557427 JMJD8Q96S16 334 aa10.62□□□□□ -0.71
SHMT2-230ENST00000557427 C1QTNF5Q9BXJ0 243 aa10.62□□□□□ -0.71
SHMT2-230ENST00000557427 C11orf54Q9H0W9 315 aaPredicted RBP10.62□□□□□ -0.71
SHMT2-230ENST00000557427 UNKLQ9H9P5 680 aaKnown RBP10.62□□□□□ -0.71
SHMT2-230ENST00000557427 LPAR2Q9HBW0 351 aa10.62□□□□□ -0.71
SHMT2-230ENST00000557427 G6PC2Q9NQR9 355 aa10.62□□□□□ -0.71
SHMT2-230ENST00000557427 FZR1Q9UM11 496 aa10.62□□□□□ -0.71
SHMT2-230ENST00000557427 FOXJ3Q9UPW0 622 aa10.62□□□□□ -0.71
SHMT2-230ENST00000557427 SLC22A13Q9Y226 551 aa10.62□□□□□ -0.71
SHMT2-230ENST00000557427 LOC105371242A0A075B767 164 aa10.61□□□□□ -0.71
SHMT2-230ENST00000557427 TPPPO94811 219 aa10.61□□□□□ -0.71
SHMT2-230ENST00000557427 SERPINA5P05154 406 aa10.61□□□□□ -0.71
SHMT2-230ENST00000557427 CD2P06729 351 aa10.61□□□□□ -0.71
SHMT2-230ENST00000557427 ADRA2CP18825 462 aa10.61□□□□□ -0.71
SHMT2-230ENST00000557427 FSTP19883 344 aa10.61□□□□□ -0.71
SHMT2-230ENST00000557427 RANBP1P43487 201 aa10.61□□□□□ -0.71
SHMT2-230ENST00000557427 INPP1P49441 399 aa10.61□□□□□ -0.71
SHMT2-230ENST00000557427 EFNB3Q15768 340 aa10.61□□□□□ -0.71
SHMT2-230ENST00000557427 SLC36A2Q495M3 483 aa10.61□□□□□ -0.71
SHMT2-230ENST00000557427 C10orf128Q5T292 105 aa10.61□□□□□ -0.71
SHMT2-230ENST00000557427 HES5Q5TA89 166 aa10.61□□□□□ -0.71
SHMT2-230ENST00000557427 TMEM244Q5VVB8 128 aa10.61□□□□□ -0.71
SHMT2-230ENST00000557427 SPATC1Q76KD6 591 aa10.61□□□□□ -0.71
SHMT2-230ENST00000557427 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.61□□□□□ -0.71
SHMT2-230ENST00000557427 ZNF584Q8IVC4 421 aa10.61□□□□□ -0.71
SHMT2-230ENST00000557427 RDH10Q8IZV5 341 aa10.61□□□□□ -0.71
SHMT2-230ENST00000557427 CELF2-AS1Q8N7Q2 184 aa10.61□□□□□ -0.71
SHMT2-230ENST00000557427 OR2AJ1Q8NGZ0 328 aa10.61□□□□□ -0.71
SHMT2-230ENST00000557427 RAB40AQ8WXH6 277 aa10.61□□□□□ -0.71
SHMT2-230ENST00000557427 TRIM63Q969Q1 353 aa10.61□□□□□ -0.71
SHMT2-230ENST00000557427 RFT1Q96AA3 541 aa10.61□□□□□ -0.71
SHMT2-230ENST00000557427 SLAMF6Q96DU3 332 aa10.61□□□□□ -0.71
SHMT2-230ENST00000557427 NEDD4LQ96PU5 975 aa10.61□□□□□ -0.71
SHMT2-230ENST00000557427 SLC6A7Q99884 636 aa10.61□□□□□ -0.71
SHMT2-230ENST00000557427 RAB1BQ9H0U4 201 aa10.61□□□□□ -0.71
SHMT2-230ENST00000557427 ABCG5Q9H222 651 aa10.61□□□□□ -0.71
SHMT2-230ENST00000557427 OR51B6Q9H340 312 aa10.61□□□□□ -0.71
SHMT2-230ENST00000557427 ZNF442Q9H7R0 627 aa10.61□□□□□ -0.71
SHMT2-230ENST00000557427 NIPAL2Q9H841 368 aa10.61□□□□□ -0.71
SHMT2-230ENST00000557427 OR52A1Q9UKL2 312 aa10.61□□□□□ -0.71
SHMT2-230ENST00000557427 HHLA2Q9UM44 414 aa10.61□□□□□ -0.71
SHMT2-230ENST00000557427 DHDHQ9UQ10 334 aa10.61□□□□□ -0.71
SHMT2-230ENST00000557427 TRAV8-7A0A075B6U6 113 aa10.6□□□□□ -0.71
SHMT2-230ENST00000557427 A0A0B4J203 849 aa10.6□□□□□ -0.71
SHMT2-230ENST00000557427 ANXA2P2A6NMY6 339 aa10.6□□□□□ -0.71
SHMT2-230ENST00000557427 ZNF878C9JN71 531 aa10.6□□□□□ -0.71
SHMT2-230ENST00000557427 LYNX1G3V0Z9 82 aa10.6□□□□□ -0.71
SHMT2-230ENST00000557427 LYRM1O43325 122 aa10.6□□□□□ -0.71
SHMT2-230ENST00000557427 GSTZ1O43708 216 aaPredicted RBP10.6□□□□□ -0.71
SHMT2-230ENST00000557427 ANXA2P07355 339 aaKnown RBP10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms