RNA–Protein interactions for RNA: ENST00000557329.1

CHD8-212, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-212ENST00000557329 CIDECQ96AQ7 238 aaPredicted RBP2.86□□□□□ -1.95
CHD8-212ENST00000557329 UPRTQ96BW1 309 aa2.86□□□□□ -1.95
CHD8-212ENST00000557329 OR8B2Q96RD0 313 aa2.86□□□□□ -1.95
CHD8-212ENST00000557329 CITED2Q99967 270 aaPredicted RBP2.86□□□□□ -1.95
CHD8-212ENST00000557329 NAT9Q9BTE0 207 aa2.86□□□□□ -1.95
CHD8-212ENST00000557329 SLC19A3Q9BZV2 496 aa2.86□□□□□ -1.95
CHD8-212ENST00000557329 MMADHCQ9H3L0 296 aaPredicted RBP2.86□□□□□ -1.95
CHD8-212ENST00000557329 RHOJQ9H4E5 214 aa2.86□□□□□ -1.95
CHD8-212ENST00000557329 C5orf66Q9H5L9 145 aa2.86□□□□□ -1.95
CHD8-212ENST00000557329 C16orf95Q9H693 158 aa2.86□□□□□ -1.95
CHD8-212ENST00000557329 POPDC3Q9HBV1 291 aa2.86□□□□□ -1.95
CHD8-212ENST00000557329 S100A14Q9HCY8 104 aa2.86□□□□□ -1.95
CHD8-212ENST00000557329 ZCCHC3Q9NUD5 404 aaKnown RBP2.86□□□□□ -1.95
CHD8-212ENST00000557329 ACER3Q9NUN7 267 aa2.86□□□□□ -1.95
CHD8-212ENST00000557329 CLEC5AQ9NY25 188 aa2.86□□□□□ -1.95
CHD8-212ENST00000557329 CLN8Q9UBY8 286 aa2.86□□□□□ -1.95
CHD8-212ENST00000557329 SLC7A8Q9UHI5 535 aa2.86□□□□□ -1.95
CHD8-212ENST00000557329 ACOT9Q9Y305 439 aa2.86□□□□□ -1.95
CHD8-212ENST00000557329 CAB39Q9Y376 341 aaPredicted RBP2.86□□□□□ -1.95
CHD8-212ENST00000557329 TMED7Q9Y3B3 224 aa2.86□□□□□ -1.95
CHD8-212ENST00000557329 POLR3HQ9Y535 204 aaPredicted RBP2.86□□□□□ -1.95
CHD8-212ENST00000557329 SACSQ9NZJ4 4579 aa2.86□□□□□ -1.95
CHD8-212ENST00000557329 COL7A1Q02388 2944 aa2.85□□□□□ -1.95
CHD8-212ENST00000557329 IGHV1-69DA0A0B4J2H0 117 aa2.85□□□□□ -1.95
CHD8-212ENST00000557329 IGHV3-16A0A0C4DH30 117 aa2.85□□□□□ -1.95
CHD8-212ENST00000557329 CENPVL3A0A0U1RRI6 287 aa2.85□□□□□ -1.95
CHD8-212ENST00000557329 KIR2DS1A0A191URI9 304 aa2.85□□□□□ -1.95
CHD8-212ENST00000557329 TMEM72A0PK05 275 aa2.85□□□□□ -1.95
CHD8-212ENST00000557329 OOEPA6NGQ2 149 aa2.85□□□□□ -1.95
CHD8-212ENST00000557329 ZNF726A6NNF4 738 aa2.85□□□□□ -1.95
CHD8-212ENST00000557329 CEACAM18A8MTB9 384 aa2.85□□□□□ -1.95
CHD8-212ENST00000557329 CFLARO15519 480 aa2.85□□□□□ -1.95
CHD8-212ENST00000557329 TIMM8AO60220 97 aaPredicted RBP2.85□□□□□ -1.95
CHD8-212ENST00000557329 MGRN1O60291 552 aa2.85□□□□□ -1.95
CHD8-212ENST00000557329 EIF4E2O60573 245 aaKnown RBP2.85□□□□□ -1.95
CHD8-212ENST00000557329 SMIM24O75264 130 aa2.85□□□□□ -1.95
CHD8-212ENST00000557329 OR4F21O95013 312 aa2.85□□□□□ -1.95
CHD8-212ENST00000557329 LY6G6CO95867 125 aa2.85□□□□□ -1.95
CHD8-212ENST00000557329 CYB5R3P00387 301 aaPredicted RBP2.85□□□□□ -1.95
CHD8-212ENST00000557329 IGHV1-69P01742 117 aa2.85□□□□□ -1.95
CHD8-212ENST00000557329 IGHV1-46P01743 117 aa2.85□□□□□ -1.95
CHD8-212ENST00000557329 KRT6AP02538 564 aa2.85□□□□□ -1.95
CHD8-212ENST00000557329 KRT6BP04259 564 aa2.85□□□□□ -1.95
CHD8-212ENST00000557329 RLN1P04808 185 aa2.85□□□□□ -1.95
CHD8-212ENST00000557329 HMGN2P05204 90 aaKnown RBP2.85□□□□□ -1.95
CHD8-212ENST00000557329 GSTA2P09210 222 aa2.85□□□□□ -1.95
CHD8-212ENST00000557329 ZNF35P13682 527 aa2.85□□□□□ -1.95
CHD8-212ENST00000557329 B4GALT1P15291 398 aa2.85□□□□□ -1.95
CHD8-212ENST00000557329 APLNRP35414 380 aa2.85□□□□□ -1.95
CHD8-212ENST00000557329 MDH2P40926 338 aaKnown RBP2.85□□□□□ -1.95
CHD8-212ENST00000557329 KRT6CP48668 564 aa2.85□□□□□ -1.95
CHD8-212ENST00000557329 SH3BGRP55822 239 aaPredicted RBP2.85□□□□□ -1.95
CHD8-212ENST00000557329 BPIFB3P59826 476 aa2.85□□□□□ -1.95
CHD8-212ENST00000557329 BNIP2Q12982 314 aa2.85□□□□□ -1.95
CHD8-212ENST00000557329 PDIA2Q13087 525 aaKnown RBP2.85□□□□□ -1.95
CHD8-212ENST00000557329 TBC1D28Q2M2D7 210 aa2.85□□□□□ -1.95
CHD8-212ENST00000557329 FAM83EQ2M2I3 478 aa2.85□□□□□ -1.95
CHD8-212ENST00000557329 SMU1Q2TAY7 513 aa2.85□□□□□ -1.95
CHD8-212ENST00000557329 SPIN4Q56A73 249 aa2.85□□□□□ -1.95
CHD8-212ENST00000557329 SPRNQ5BIV9 151 aa2.85□□□□□ -1.95
CHD8-212ENST00000557329 THEM4Q5T1C6 240 aa2.85□□□□□ -1.95
CHD8-212ENST00000557329 LINC00242Q5T6M2 205 aa2.85□□□□□ -1.95
CHD8-212ENST00000557329 C1QTNF12Q5T7M4 302 aa2.85□□□□□ -1.95
CHD8-212ENST00000557329 CLEC6AQ6EIG7 209 aa2.85□□□□□ -1.95
CHD8-212ENST00000557329 CCDC137Q6PK04 289 aaKnown RBP2.85□□□□□ -1.95
CHD8-212ENST00000557329 TMEM182Q6ZP80 229 aaPredicted RBP2.85□□□□□ -1.95
CHD8-212ENST00000557329 CCDC121Q6ZUS5 278 aa2.85□□□□□ -1.95
CHD8-212ENST00000557329 KRTAP5-2Q701N4 177 aa2.85□□□□□ -1.95
CHD8-212ENST00000557329 EIF3MQ7L2H7 374 aaKnown RBP2.85□□□□□ -1.95
CHD8-212ENST00000557329 OLIG3Q7RTU3 272 aa2.85□□□□□ -1.95
CHD8-212ENST00000557329 GRINAQ7Z429 371 aa2.85□□□□□ -1.95
CHD8-212ENST00000557329 LRRC28Q86X40 367 aaPredicted RBP2.85□□□□□ -1.95
CHD8-212ENST00000557329 KLHL7Q8IXQ5 586 aa2.85□□□□□ -1.95
CHD8-212ENST00000557329 CADM2Q8N3J6 435 aa2.85□□□□□ -1.95
CHD8-212ENST00000557329 ARFGAP2Q8N6H7 521 aa2.85□□□□□ -1.95
CHD8-212ENST00000557329 NAT8LQ8N9F0 302 aa2.85□□□□□ -1.95
CHD8-212ENST00000557329 FBXO36Q8NEA4 188 aa2.85□□□□□ -1.95
CHD8-212ENST00000557329 C19orf18Q8NEA5 215 aa2.85□□□□□ -1.95
CHD8-212ENST00000557329 SLC30A7Q8NEW0 376 aa2.85□□□□□ -1.95
CHD8-212ENST00000557329 OR6N1Q8NGY5 312 aa2.85□□□□□ -1.95
CHD8-212ENST00000557329 DCAKDQ8WVC6 231 aa2.85□□□□□ -1.95
CHD8-212ENST00000557329 ST8SIA1Q92185 356 aa2.85□□□□□ -1.95
CHD8-212ENST00000557329 TMEM45BQ96B21 275 aa2.85□□□□□ -1.95
CHD8-212ENST00000557329 MS4A4EQ96PG1 132 aa2.85□□□□□ -1.95
CHD8-212ENST00000557329 RCHY1Q96PM5 261 aa2.85□□□□□ -1.95
CHD8-212ENST00000557329 DESI2Q9BSY9 194 aa2.85□□□□□ -1.95
CHD8-212ENST00000557329 TMEM106BQ9NUM4 274 aa2.85□□□□□ -1.95
CHD8-212ENST00000557329 MRGBPQ9NV56 204 aa2.85□□□□□ -1.95
CHD8-212ENST00000557329 ONECUT1Q9UBC0 465 aa2.85□□□□□ -1.95
CHD8-212ENST00000557329 EIF3KQ9UBQ5 218 aaKnown RBP2.85□□□□□ -1.95
CHD8-212ENST00000557329 ATP6V1HQ9UI12 483 aa2.85□□□□□ -1.95
CHD8-212ENST00000557329 ZNF107Q9UII5 783 aaPredicted RBP2.85□□□□□ -1.95
CHD8-212ENST00000557329 TCRBV4S1A1TA0A5B7 111 aa2.84□□□□□ -1.95
CHD8-212ENST00000557329 ZNF99A8MXY4 864 aaPredicted RBP2.84□□□□□ -1.95
CHD8-212ENST00000557329 ZNF732B4DXR9 585 aa2.84□□□□□ -1.95
CHD8-212ENST00000557329 K7EQG2 157 aa2.84□□□□□ -1.95
CHD8-212ENST00000557329 MANBAO00462 879 aa2.84□□□□□ -1.95
CHD8-212ENST00000557329 FBP2O00757 339 aa2.84□□□□□ -1.95
CHD8-212ENST00000557329 PHOX2AO14813 284 aa2.84□□□□□ -1.95
CHD8-212ENST00000557329 ENSAO43768 121 aaKnown RBP2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms