RNA–Protein interactions for RNA: ENST00000557269.5

SHMT2-227, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-227ENST00000557269 FN3KRPQ9HA64 309 aa10.8□□□□□ -0.68
SHMT2-227ENST00000557269 VCX3AQ9NNX9 186 aa10.8□□□□□ -0.68
SHMT2-227ENST00000557269 TMEM106BQ9NUM4 274 aa10.8□□□□□ -0.68
SHMT2-227ENST00000557269 SLC7A11Q9UPY5 501 aa10.8□□□□□ -0.68
SHMT2-227ENST00000557269 IGHV4-30-2A0A087WSY4 118 aa10.79□□□□□ -0.68
SHMT2-227ENST00000557269 SHISA3A0PJX4 238 aa10.79□□□□□ -0.68
SHMT2-227ENST00000557269 TMEM210A6NLX4 147 aa10.79□□□□□ -0.68
SHMT2-227ENST00000557269 TMEM178BH3BS89 294 aa10.79□□□□□ -0.68
SHMT2-227ENST00000557269 WNT9BO14905 357 aa10.79□□□□□ -0.68
SHMT2-227ENST00000557269 ZNF205O95201 554 aa10.79□□□□□ -0.68
SHMT2-227ENST00000557269 MAS1P04201 325 aa10.79□□□□□ -0.68
SHMT2-227ENST00000557269 EGR1P18146 543 aa10.79□□□□□ -0.68
SHMT2-227ENST00000557269 ADRA2CP18825 462 aa10.79□□□□□ -0.68
SHMT2-227ENST00000557269 FSTP19883 344 aa10.79□□□□□ -0.68
SHMT2-227ENST00000557269 PRKACBP22694 351 aa10.79□□□□□ -0.68
SHMT2-227ENST00000557269 HAAOP46952 286 aa10.79□□□□□ -0.68
SHMT2-227ENST00000557269 MTCP1P56278 107 aa10.79□□□□□ -0.68
SHMT2-227ENST00000557269 MZT1Q08AG7 82 aa10.79□□□□□ -0.68
SHMT2-227ENST00000557269 RIN1Q13671 783 aa10.79□□□□□ -0.68
SHMT2-227ENST00000557269 CLEC12BQ2HXU8 276 aa10.79□□□□□ -0.68
SHMT2-227ENST00000557269 HFEQ30201 348 aa10.79□□□□□ -0.68
SHMT2-227ENST00000557269 WDR82Q6UXN9 313 aa10.79□□□□□ -0.68
SHMT2-227ENST00000557269 LRRTM1Q86UE6 522 aa10.79□□□□□ -0.68
SHMT2-227ENST00000557269 C19orf18Q8NEA5 215 aa10.79□□□□□ -0.68
SHMT2-227ENST00000557269 DNAAF1Q8NEP3 725 aa10.79□□□□□ -0.68
SHMT2-227ENST00000557269 WFDC11Q8NEX6 87 aa10.79□□□□□ -0.68
SHMT2-227ENST00000557269 OR13F1Q8NGS4 319 aa10.79□□□□□ -0.68
SHMT2-227ENST00000557269 C10orf105Q8TEF2 133 aa10.79□□□□□ -0.68
SHMT2-227ENST00000557269 AQP3Q92482 292 aa10.79□□□□□ -0.68
SHMT2-227ENST00000557269 SPSB1Q96BD6 273 aa10.79□□□□□ -0.68
SHMT2-227ENST00000557269 BORCS8Q96FH0 119 aa10.79□□□□□ -0.68
SHMT2-227ENST00000557269 ZNF488Q96MN9 340 aa10.79□□□□□ -0.68
SHMT2-227ENST00000557269 TECTBQ96PL2 329 aa10.79□□□□□ -0.68
SHMT2-227ENST00000557269 RNF167Q9H6Y7 350 aa10.79□□□□□ -0.68
SHMT2-227ENST00000557269 CHODLQ9H9P2 273 aa10.79□□□□□ -0.68
SHMT2-227ENST00000557269 DLL4Q9NR61 685 aa10.79□□□□□ -0.68
SHMT2-227ENST00000557269 STUB1Q9UNE7 303 aa10.79□□□□□ -0.68
SHMT2-227ENST00000557269 FOXJ3Q9UPW0 622 aa10.79□□□□□ -0.68
SHMT2-227ENST00000557269 DYSFO75923 2080 aa10.79□□□□□ -0.68
SHMT2-227ENST00000557269 TANC2Q9HCD6 1990 aa10.79□□□□□ -0.68
SHMT2-227ENST00000557269 VWC2LB2RUY7 222 aa10.78□□□□□ -0.68
SHMT2-227ENST00000557269 PLATP00750 562 aa10.78□□□□□ -0.68
SHMT2-227ENST00000557269 LHBP01229 141 aa10.78□□□□□ -0.68
SHMT2-227ENST00000557269 HCKP08631 526 aa10.78□□□□□ -0.68
SHMT2-227ENST00000557269 SRMP19623 302 aa10.78□□□□□ -0.68
SHMT2-227ENST00000557269 GIFP27352 417 aa10.78□□□□□ -0.68
SHMT2-227ENST00000557269 MAPK3P27361 379 aaPredicted RBP10.78□□□□□ -0.68
SHMT2-227ENST00000557269 BDKRB2P30411 391 aa10.78□□□□□ -0.68
SHMT2-227ENST00000557269 RBP2P50120 134 aa10.78□□□□□ -0.68
SHMT2-227ENST00000557269 PDLIM4P50479 330 aa10.78□□□□□ -0.68
SHMT2-227ENST00000557269 PPP3R1P63098 170 aa10.78□□□□□ -0.68
SHMT2-227ENST00000557269 KISS1Q15726 138 aa10.78□□□□□ -0.68
SHMT2-227ENST00000557269 HSD17B12Q53GQ0 312 aa10.78□□□□□ -0.68
SHMT2-227ENST00000557269 AVPI1Q5T686 147 aa10.78□□□□□ -0.68
SHMT2-227ENST00000557269 C22orf42Q6IC83 251 aa10.78□□□□□ -0.68
SHMT2-227ENST00000557269 LHFPL2Q6ZUX7 228 aa10.78□□□□□ -0.68
SHMT2-227ENST00000557269 LYPD6Q86Y78 171 aa10.78□□□□□ -0.68
SHMT2-227ENST00000557269 ZNF573Q86YE8 665 aa10.78□□□□□ -0.68
SHMT2-227ENST00000557269 BATF2Q8N1L9 274 aa10.78□□□□□ -0.68
SHMT2-227ENST00000557269 GCSAMQ8N6F7 178 aa10.78□□□□□ -0.68
SHMT2-227ENST00000557269 BOLLQ8N9W6 283 aaKnown RBP10.78□□□□□ -0.68
SHMT2-227ENST00000557269 OR5D18Q8NGL1 313 aa10.78□□□□□ -0.68
SHMT2-227ENST00000557269 LRRC29Q8WV35 223 aa10.78□□□□□ -0.68
SHMT2-227ENST00000557269 FAM168AQ92567 244 aa10.78□□□□□ -0.68
SHMT2-227ENST00000557269 ERGIC1Q969X5 290 aa10.78□□□□□ -0.68
SHMT2-227ENST00000557269 SEH1LQ96EE3 360 aa10.78□□□□□ -0.68
SHMT2-227ENST00000557269 GFI1Q99684 422 aa10.78□□□□□ -0.68
SHMT2-227ENST00000557269 CHCHD6Q9BRQ6 235 aa10.78□□□□□ -0.68
SHMT2-227ENST00000557269 MYOZ1Q9NP98 299 aaPredicted RBP10.78□□□□□ -0.68
SHMT2-227ENST00000557269 TMEM138Q9NPI0 162 aa10.78□□□□□ -0.68
SHMT2-227ENST00000557269 TXNL4BQ9NX01 149 aaKnown RBP10.78□□□□□ -0.68
SHMT2-227ENST00000557269 CKLFQ9UBR5 152 aa10.78□□□□□ -0.68
SHMT2-227ENST00000557269 ARID1AO14497 2285 aa10.78□□□□□ -0.68
SHMT2-227ENST00000557269 PRRC2AP48634 2157 aaKnown RBP10.77□□□□□ -0.68
SHMT2-227ENST00000557269 IGKV1-12A0A0C4DH73 117 aa10.77□□□□□ -0.69
SHMT2-227ENST00000557269 hCG_1807616A0A1W2PRN6 198 aa10.77□□□□□ -0.69
SHMT2-227ENST00000557269 TRIM64BA6NI03 449 aa10.77□□□□□ -0.69
SHMT2-227ENST00000557269 F8VVB4 439 aa10.77□□□□□ -0.69
SHMT2-227ENST00000557269 F8VWA3 439 aa10.77□□□□□ -0.69
SHMT2-227ENST00000557269 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.77□□□□□ -0.69
SHMT2-227ENST00000557269 J3QT63 122 aa10.77□□□□□ -0.69
SHMT2-227ENST00000557269 PPIHO43447 177 aaKnown RBP10.77□□□□□ -0.69
SHMT2-227ENST00000557269 AKR7A2O43488 359 aa10.77□□□□□ -0.69
SHMT2-227ENST00000557269 SPRY1O43609 319 aaPredicted RBP10.77□□□□□ -0.69
SHMT2-227ENST00000557269 IGKV1D-12P01611 117 aa10.77□□□□□ -0.69
SHMT2-227ENST00000557269 ALDOBP05062 364 aa10.77□□□□□ -0.69
SHMT2-227ENST00000557269 OCMP0CE72 109 aaPredicted RBP10.77□□□□□ -0.69
SHMT2-227ENST00000557269 GALP22466 123 aa10.77□□□□□ -0.69
SHMT2-227ENST00000557269 MPZP25189 248 aa10.77□□□□□ -0.69
SHMT2-227ENST00000557269 CALRP27797 417 aaKnown RBP10.77□□□□□ -0.69
SHMT2-227ENST00000557269 CD80P33681 288 aa10.77□□□□□ -0.69
SHMT2-227ENST00000557269 ATP1B3P54709 279 aa10.77□□□□□ -0.69
SHMT2-227ENST00000557269 ZP1P60852 638 aa10.77□□□□□ -0.69
SHMT2-227ENST00000557269 GMFBP60983 142 aa10.77□□□□□ -0.69
SHMT2-227ENST00000557269 ZNF181Q2M3W8 571 aa10.77□□□□□ -0.69
SHMT2-227ENST00000557269 DDI2Q5TDH0 399 aa10.77□□□□□ -0.69
SHMT2-227ENST00000557269 CLEC2AQ6UVW9 174 aa10.77□□□□□ -0.69
SHMT2-227ENST00000557269 PRSS57Q6UWY2 283 aa10.77□□□□□ -0.69
SHMT2-227ENST00000557269 SLC25A26Q70HW3 274 aa10.77□□□□□ -0.69
SHMT2-227ENST00000557269 C1QL2Q7Z5L3 287 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms