RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 APH1AQ96BI3 265 aa3.87□□□□□ -1.79
SRP54-212ENST00000556992 ORAI1Q96D31 301 aa3.87□□□□□ -1.79
SRP54-212ENST00000556992 FBXO17Q96EF6 278 aa3.87□□□□□ -1.79
SRP54-212ENST00000556992 PGAM5Q96HS1 289 aa3.87□□□□□ -1.79
SRP54-212ENST00000556992 SMAD5Q99717 465 aaKnown RBP3.87□□□□□ -1.79
SRP54-212ENST00000556992 MARVELD1Q9BSK0 173 aa3.87□□□□□ -1.79
SRP54-212ENST00000556992 CACNG6Q9BXT2 260 aa3.87□□□□□ -1.79
SRP54-212ENST00000556992 PRSS22Q9GZN4 317 aa3.87□□□□□ -1.79
SRP54-212ENST00000556992 DEFB127Q9H1M4 99 aa3.87□□□□□ -1.79
SRP54-212ENST00000556992 ATG5Q9H1Y0 275 aa3.87□□□□□ -1.79
SRP54-212ENST00000556992 SLCO5A1Q9H2Y9 848 aa3.87□□□□□ -1.79
SRP54-212ENST00000556992 DPAGT1Q9H3H5 408 aa3.87□□□□□ -1.79
SRP54-212ENST00000556992 RGCCQ9H4X1 137 aa3.87□□□□□ -1.79
SRP54-212ENST00000556992 EXO5Q9H790 373 aa3.87□□□□□ -1.79
SRP54-212ENST00000556992 SCPEP1Q9HB40 452 aa3.87□□□□□ -1.79
SRP54-212ENST00000556992 PNRC2Q9NPJ4 139 aaKnown RBP3.87□□□□□ -1.79
SRP54-212ENST00000556992 GPR84Q9NQS5 396 aa3.87□□□□□ -1.79
SRP54-212ENST00000556992 GLRX2Q9NS18 164 aa3.87□□□□□ -1.79
SRP54-212ENST00000556992 PLEK2Q9NYT0 353 aa3.87□□□□□ -1.79
SRP54-212ENST00000556992 TAS2R4Q9NYW5 299 aa3.87□□□□□ -1.79
SRP54-212ENST00000556992 GHRLQ9UBU3 117 aa3.87□□□□□ -1.79
SRP54-212ENST00000556992 CLEC4AQ9UMR7 237 aa3.87□□□□□ -1.79
SRP54-212ENST00000556992 ZNF175Q9Y473 711 aa3.87□□□□□ -1.79
SRP54-212ENST00000556992 N6AMT1Q9Y5N5 214 aa3.87□□□□□ -1.79
SRP54-212ENST00000556992 CACNG2Q9Y698 323 aa3.87□□□□□ -1.79
SRP54-212ENST00000556992 RELNP78509 3460 aa3.87□□□□□ -1.79
SRP54-212ENST00000556992 PCDH15Q96QU1 1955 aa3.87□□□□□ -1.79
SRP54-212ENST00000556992 KMT2EQ8IZD2 1858 aa3.86□□□□□ -1.79
SRP54-212ENST00000556992 ASXL3Q9C0F0 2248 aa3.86□□□□□ -1.79
SRP54-212ENST00000556992 LAMA1P25391 3075 aa3.86□□□□□ -1.79
SRP54-212ENST00000556992 TRAV18A0A075B6X5 111 aa3.86□□□□□ -1.79
SRP54-212ENST00000556992 GGT3PA6NGU5 568 aa3.86□□□□□ -1.79
SRP54-212ENST00000556992 SLC22A20A6NK97 555 aa3.86□□□□□ -1.79
SRP54-212ENST00000556992 DHRS7CA6NNS2 312 aa3.86□□□□□ -1.79
SRP54-212ENST00000556992 ZNF587BE7ETH6 402 aa3.86□□□□□ -1.79
SRP54-212ENST00000556992 INMT-MINDY4F8WBC2 141 aa3.86□□□□□ -1.79
SRP54-212ENST00000556992 M0R135 149 aa3.86□□□□□ -1.79
SRP54-212ENST00000556992 SULT1C2O00338 296 aa3.86□□□□□ -1.79
SRP54-212ENST00000556992 TFECO14948 347 aaPredicted RBP3.86□□□□□ -1.79
SRP54-212ENST00000556992 TRIAP1O43715 76 aa3.86□□□□□ -1.79
SRP54-212ENST00000556992 SYNGR3O43761 229 aa3.86□□□□□ -1.79
SRP54-212ENST00000556992 LANCL1O43813 399 aa3.86□□□□□ -1.79
SRP54-212ENST00000556992 CTAG2O75638 210 aa3.86□□□□□ -1.79
SRP54-212ENST00000556992 CEACAM4O75871 244 aa3.86□□□□□ -1.79
SRP54-212ENST00000556992 CCNKO75909 580 aa3.86□□□□□ -1.79
SRP54-212ENST00000556992 ITGA5P08648 1049 aa3.86□□□□□ -1.79
SRP54-212ENST00000556992 CSF1P09603 554 aa3.86□□□□□ -1.79
SRP54-212ENST00000556992 CD3GP09693 182 aa3.86□□□□□ -1.79
SRP54-212ENST00000556992 FCGR2AP12318 317 aa3.86□□□□□ -1.79
SRP54-212ENST00000556992 GABRA1P14867 456 aa3.86□□□□□ -1.79
SRP54-212ENST00000556992 PRKACBP22694 351 aa3.86□□□□□ -1.79
SRP54-212ENST00000556992 CDK2P24941 298 aa3.86□□□□□ -1.79
SRP54-212ENST00000556992 OTX1P32242 354 aaPredicted RBP3.86□□□□□ -1.79
SRP54-212ENST00000556992 FAUP35544 74 aaKnown RBP3.86□□□□□ -1.79
SRP54-212ENST00000556992 ZNF93P35789 620 aaPredicted RBP3.86□□□□□ -1.79
SRP54-212ENST00000556992 RFC3P40938 356 aa3.86□□□□□ -1.79
SRP54-212ENST00000556992 POU3F4P49335 361 aa3.86□□□□□ -1.79
SRP54-212ENST00000556992 RAB25P57735 213 aa3.86□□□□□ -1.79
SRP54-212ENST00000556992 TAS2R20P59543 309 aa3.86□□□□□ -1.79
SRP54-212ENST00000556992 ARF1P84077 181 aaKnown RBP3.86□□□□□ -1.79
SRP54-212ENST00000556992 PSG4Q00888 419 aa3.86□□□□□ -1.79
SRP54-212ENST00000556992 SPOCK1Q08629 439 aa3.86□□□□□ -1.79
SRP54-212ENST00000556992 RIPPLY1Q0D2K3 151 aa3.86□□□□□ -1.79
SRP54-212ENST00000556992 MADCAM1Q13477 382 aa3.86□□□□□ -1.79
SRP54-212ENST00000556992 RSPO1Q2MKA7 263 aaPredicted RBP3.86□□□□□ -1.79
SRP54-212ENST00000556992 CEACAM16Q2WEN9 425 aa3.86□□□□□ -1.79
SRP54-212ENST00000556992 DEFB109BQ30KR1 87 aa3.86□□□□□ -1.79
SRP54-212ENST00000556992 PLA1AQ53H76 456 aa3.86□□□□□ -1.79
SRP54-212ENST00000556992 PLAC9Q5JTB6 97 aa3.86□□□□□ -1.79
SRP54-212ENST00000556992 ATP1A1-AS1Q5TC04 95 aa3.86□□□□□ -1.79
SRP54-212ENST00000556992 IGFL3Q6UXB1 125 aa3.86□□□□□ -1.79
SRP54-212ENST00000556992 DNM1P46Q6ZS02 220 aa3.86□□□□□ -1.79
SRP54-212ENST00000556992 Q6ZSR3 168 aa3.86□□□□□ -1.79
SRP54-212ENST00000556992 UTS2BQ765I0 119 aa3.86□□□□□ -1.79
SRP54-212ENST00000556992 SLC16A14Q7RTX9 510 aa3.86□□□□□ -1.79
SRP54-212ENST00000556992 PRSS45Q7RTY3 260 aa3.86□□□□□ -1.79
SRP54-212ENST00000556992 OR2W3Q7Z3T1 314 aa3.86□□□□□ -1.79
SRP54-212ENST00000556992 VASH2Q86V25 355 aa3.86□□□□□ -1.79
SRP54-212ENST00000556992 ANGPTL5Q86XS5 388 aa3.86□□□□□ -1.79
SRP54-212ENST00000556992 LYPD6Q86Y78 171 aa3.86□□□□□ -1.79
SRP54-212ENST00000556992 SKA3Q8IX90 412 aa3.86□□□□□ -1.79
SRP54-212ENST00000556992 TUSC5Q8IXB3 177 aa3.86□□□□□ -1.79
SRP54-212ENST00000556992 CCDC36Q8IYA8 594 aa3.86□□□□□ -1.79
SRP54-212ENST00000556992 NRACQ8N912 160 aa3.86□□□□□ -1.79
SRP54-212ENST00000556992 OR8B12Q8NGG6 310 aa3.86□□□□□ -1.79
SRP54-212ENST00000556992 OR1J2Q8NGS2 313 aa3.86□□□□□ -1.79
SRP54-212ENST00000556992 KCNG3Q8TAE7 436 aa3.86□□□□□ -1.79
SRP54-212ENST00000556992 ABHD3Q8WU67 409 aa3.86□□□□□ -1.79
SRP54-212ENST00000556992 AKAP1Q92667 903 aaKnown RBP eCLIP3.86□□□□□ -1.79
SRP54-212ENST00000556992 TRIM63Q969Q1 353 aa3.86□□□□□ -1.79
SRP54-212ENST00000556992 SGK3Q96BR1 496 aa3.86□□□□□ -1.79
SRP54-212ENST00000556992 SLC25A38Q96DW6 304 aa3.86□□□□□ -1.79
SRP54-212ENST00000556992 CPNE2Q96FN4 548 aaPredicted RBP3.86□□□□□ -1.79
SRP54-212ENST00000556992 ZNF799Q96GE5 643 aa3.86□□□□□ -1.79
SRP54-212ENST00000556992 WDYHV1Q96HA8 205 aa3.86□□□□□ -1.79
SRP54-212ENST00000556992 MED30Q96HR3 178 aa3.86□□□□□ -1.79
SRP54-212ENST00000556992 ZNF845Q96IR2 970 aaPredicted RBP3.86□□□□□ -1.79
SRP54-212ENST00000556992 NEDD4LQ96PU5 975 aa3.86□□□□□ -1.79
SRP54-212ENST00000556992 NUDT16L1Q9BRJ7 211 aaKnown RBP3.86□□□□□ -1.79
SRP54-212ENST00000556992 HES7Q9BYE0 225 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms