RNA–Protein interactions for RNA: ENST00000556644.5

ATXN3-242, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 372 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-242ENST00000556644 MED30Q96HR3 178 aa3.45□□□□□ -1.86
ATXN3-242ENST00000556644 BOD1Q96IK1 185 aa3.45□□□□□ -1.86
ATXN3-242ENST00000556644 RNF170Q96K19 258 aa3.45□□□□□ -1.86
ATXN3-242ENST00000556644 DDOQ99489 341 aa3.45□□□□□ -1.86
ATXN3-242ENST00000556644 TMEM246Q9BRR3 403 aa3.45□□□□□ -1.86
ATXN3-242ENST00000556644 ACTRT3Q9BYD9 372 aa3.45□□□□□ -1.86
ATXN3-242ENST00000556644 C11orf54Q9H0W9 315 aaPredicted RBP3.45□□□□□ -1.86
ATXN3-242ENST00000556644 MIXL1Q9H2W2 232 aa3.45□□□□□ -1.86
ATXN3-242ENST00000556644 OR51I1Q9H343 314 aa3.45□□□□□ -1.86
ATXN3-242ENST00000556644 PIGUQ9H490 435 aa3.45□□□□□ -1.86
ATXN3-242ENST00000556644 GLIPR2Q9H4G4 154 aa3.45□□□□□ -1.86
ATXN3-242ENST00000556644 ZCCHC4Q9H5U6 513 aa3.45□□□□□ -1.86
ATXN3-242ENST00000556644 ZNF702PQ9H963 129 aa3.45□□□□□ -1.86
ATXN3-242ENST00000556644 EMC7Q9NPA0 242 aa3.45□□□□□ -1.86
ATXN3-242ENST00000556644 TRIM36Q9NQ86 728 aa3.45□□□□□ -1.86
ATXN3-242ENST00000556644 CYSLTR2Q9NS75 346 aa3.45□□□□□ -1.86
ATXN3-242ENST00000556644 ZCCHC3Q9NUD5 404 aaKnown RBP3.45□□□□□ -1.86
ATXN3-242ENST00000556644 C14orf119Q9NWQ9 140 aa3.45□□□□□ -1.86
ATXN3-242ENST00000556644 BABAM2Q9NXR7 383 aa3.45□□□□□ -1.86
ATXN3-242ENST00000556644 B3GNT2Q9NY97 397 aa3.45□□□□□ -1.86
ATXN3-242ENST00000556644 DNAJC27Q9NZQ0 273 aa3.45□□□□□ -1.86
ATXN3-242ENST00000556644 MRPL15Q9P015 296 aaKnown RBP3.45□□□□□ -1.86
ATXN3-242ENST00000556644 ABRACLQ9P1F3 81 aa3.45□□□□□ -1.86
ATXN3-242ENST00000556644 CLEC2DQ9UHP7 191 aa3.45□□□□□ -1.86
ATXN3-242ENST00000556644 GPR160Q9UJ42 338 aa3.45□□□□□ -1.86
ATXN3-242ENST00000556644 ING4Q9UNL4 249 aa3.45□□□□□ -1.86
ATXN3-242ENST00000556644 SMAD5-AS1Q9Y6J3 95 aa3.45□□□□□ -1.86
ATXN3-242ENST00000556644 CDH10Q9Y6N8 788 aa3.45□□□□□ -1.86
ATXN3-242ENST00000556644 TANC2Q9HCD6 1990 aa3.45□□□□□ -1.86
ATXN3-242ENST00000556644 NUP214P35658 2090 aaPredicted RBP3.44□□□□□ -1.86
ATXN3-242ENST00000556644 IGLV3-9A0A075B6K5 115 aa3.44□□□□□ -1.86
ATXN3-242ENST00000556644 A0A087WV62 115 aa3.44□□□□□ -1.86
ATXN3-242ENST00000556644 TCRBV4S1A1TA0A5B7 111 aa3.44□□□□□ -1.86
ATXN3-242ENST00000556644 C7orf66A4D0T2 115 aa3.44□□□□□ -1.86
ATXN3-242ENST00000556644 TRAPPC13A5PLN9 417 aa3.44□□□□□ -1.86
ATXN3-242ENST00000556644 MEGF11A6BM72 1044 aa3.44□□□□□ -1.86
ATXN3-242ENST00000556644 ZNF879B4DU55 563 aa3.44□□□□□ -1.86
ATXN3-242ENST00000556644 INMT-MINDY4F8WBC2 141 aa3.44□□□□□ -1.86
ATXN3-242ENST00000556644 GTPBP1O00178 669 aaKnown RBP3.44□□□□□ -1.86
ATXN3-242ENST00000556644 GABRPO00591 440 aa3.44□□□□□ -1.86
ATXN3-242ENST00000556644 SURF4O15260 269 aa3.44□□□□□ -1.86
ATXN3-242ENST00000556644 PLA2G10O15496 165 aa3.44□□□□□ -1.86
ATXN3-242ENST00000556644 SULT1B1O43704 296 aa3.44□□□□□ -1.86
ATXN3-242ENST00000556644 GSTZ1O43708 216 aaPredicted RBP3.44□□□□□ -1.86
ATXN3-242ENST00000556644 ENSAO43768 121 aaKnown RBP3.44□□□□□ -1.86
ATXN3-242ENST00000556644 PRAF2O60831 178 aa3.44□□□□□ -1.86
ATXN3-242ENST00000556644 ARL6IP5O75915 188 aa3.44□□□□□ -1.86
ATXN3-242ENST00000556644 PAHP00439 452 aa3.44□□□□□ -1.86
ATXN3-242ENST00000556644 IGF2P01344 180 aa3.44□□□□□ -1.86
ATXN3-242ENST00000556644 C1QCP02747 245 aa3.44□□□□□ -1.86
ATXN3-242ENST00000556644 DBIP07108 87 aaKnown RBP3.44□□□□□ -1.86
ATXN3-242ENST00000556644 NGFRP08138 427 aa3.44□□□□□ -1.86
ATXN3-242ENST00000556644 PATE4P0C8F1 98 aa3.44□□□□□ -1.86
ATXN3-242ENST00000556644 SLC6A1P30531 599 aa3.44□□□□□ -1.86
ATXN3-242ENST00000556644 MDH2P40926 338 aaKnown RBP3.44□□□□□ -1.86
ATXN3-242ENST00000556644 RBM34P42696 430 aaKnown RBP3.44□□□□□ -1.86
ATXN3-242ENST00000556644 PITPNBP48739 271 aa3.44□□□□□ -1.86
ATXN3-242ENST00000556644 NCBP2P52298 156 aaKnown RBP eCLIP3.44□□□□□ -1.865e-7■■■■□ 25.1
ATXN3-242ENST00000556644 SCAND1P57086 179 aa3.44□□□□□ -1.86
ATXN3-242ENST00000556644 AP3S2P59780 193 aa3.44□□□□□ -1.86
ATXN3-242ENST00000556644 MRPS10P82664 201 aaKnown RBP3.44□□□□□ -1.86
ATXN3-242ENST00000556644 CD83Q01151 205 aa3.44□□□□□ -1.86
ATXN3-242ENST00000556644 FABP5Q01469 135 aa3.44□□□□□ -1.86
ATXN3-242ENST00000556644 HSF2Q03933 536 aa3.44□□□□□ -1.86
ATXN3-242ENST00000556644 HSPB3Q12988 150 aa3.44□□□□□ -1.86
ATXN3-242ENST00000556644 PIN1Q13526 163 aaPredicted RBP3.44□□□□□ -1.86
ATXN3-242ENST00000556644 DYRK1AQ13627 763 aa3.44□□□□□ -1.86
ATXN3-242ENST00000556644 GALEQ14376 348 aa3.44□□□□□ -1.86
ATXN3-242ENST00000556644 SYPL1Q16563 259 aa3.44□□□□□ -1.86
ATXN3-242ENST00000556644 TATDN3Q17R31 274 aa3.44□□□□□ -1.86
ATXN3-242ENST00000556644 GSG1Q2KHT4 349 aa3.44□□□□□ -1.86
ATXN3-242ENST00000556644 PRSS53Q2L4Q9 553 aa3.44□□□□□ -1.86
ATXN3-242ENST00000556644 CEACAM16Q2WEN9 425 aa3.44□□□□□ -1.86
ATXN3-242ENST00000556644 ARHGAP11BQ3KRB8 267 aa3.44□□□□□ -1.86
ATXN3-242ENST00000556644 CCDC58Q4VC31 144 aa3.44□□□□□ -1.86
ATXN3-242ENST00000556644 SLC25A53Q5H9E4 307 aa3.44□□□□□ -1.86
ATXN3-242ENST00000556644 TMEM255AQ5JRV8 349 aa3.44□□□□□ -1.86
ATXN3-242ENST00000556644 SPATA46Q5T0L3 261 aa3.44□□□□□ -1.86
ATXN3-242ENST00000556644 CD276Q5ZPR3 534 aa3.44□□□□□ -1.86
ATXN3-242ENST00000556644 C22orf42Q6IC83 251 aa3.44□□□□□ -1.86
ATXN3-242ENST00000556644 ZNF613Q6PF04 617 aa3.44□□□□□ -1.86
ATXN3-242ENST00000556644 CNIH2Q6PI25 160 aa3.44□□□□□ -1.86
ATXN3-242ENST00000556644 ZNF322Q6U7Q0 402 aaPredicted RBP3.44□□□□□ -1.86
ATXN3-242ENST00000556644 ETV3LQ6ZN32 361 aa3.44□□□□□ -1.86
ATXN3-242ENST00000556644 TMPRSS11FQ6ZWK6 438 aa3.44□□□□□ -1.86
ATXN3-242ENST00000556644 SZRD1Q7Z422 152 aa3.44□□□□□ -1.86
ATXN3-242ENST00000556644 OAFQ86UD1 273 aa3.44□□□□□ -1.86
ATXN3-242ENST00000556644 RANBP3LQ86VV4 465 aaPredicted RBP3.44□□□□□ -1.86
ATXN3-242ENST00000556644 MISPQ8IVT2 679 aa3.44□□□□□ -1.86
ATXN3-242ENST00000556644 CMIPQ8IY22 773 aa3.44□□□□□ -1.86
ATXN3-242ENST00000556644 SLC7A5P1Q8MH63 180 aa3.44□□□□□ -1.86
ATXN3-242ENST00000556644 SYS1Q8N2H4 156 aa3.44□□□□□ -1.86
ATXN3-242ENST00000556644 CLIP4Q8N3C7 705 aa3.44□□□□□ -1.86
ATXN3-242ENST00000556644 LNX2Q8N448 690 aa3.44□□□□□ -1.86
ATXN3-242ENST00000556644 MAPKAPK5-AS1Q8N8E1 139 aa3.44□□□□□ -1.86
ATXN3-242ENST00000556644 OR52L1Q8NGH7 329 aa3.44□□□□□ -1.86
ATXN3-242ENST00000556644 OR6T1Q8NGN1 323 aa3.44□□□□□ -1.86
ATXN3-242ENST00000556644 OR52P1PQ8NH57 321 aa3.44□□□□□ -1.86
ATXN3-242ENST00000556644 OR5R1Q8NH85 324 aa3.44□□□□□ -1.86
ATXN3-242ENST00000556644 WIPF2Q8TF74 440 aaPredicted RBP3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms