RNA–Protein interactions for RNA: ENST00000556486.5

SCFD1-220, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 974 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-220ENST00000556486 NECAP2Q9NVZ3 263 aa8.19□□□□□ -1.1
SCFD1-220ENST00000556486 ZNF446Q9NWS9 450 aa8.19□□□□□ -1.1
SCFD1-220ENST00000556486 ADA2Q9NZK5 511 aa8.19□□□□□ -1.1
SCFD1-220ENST00000556486 ANKRD30BLA7E2S9 258 aa8.18□□□□□ -1.1
SCFD1-220ENST00000556486 ARPC2O15144 300 aa8.18□□□□□ -1.1
SCFD1-220ENST00000556486 TSPAN9O75954 239 aa8.18□□□□□ -1.1
SCFD1-220ENST00000556486 GYPAP02724 150 aa8.18□□□□□ -1.1
SCFD1-220ENST00000556486 CFL1P23528 166 aaKnown RBP8.18□□□□□ -1.1
SCFD1-220ENST00000556486 FMO3P31513 532 aa8.18□□□□□ -1.1
SCFD1-220ENST00000556486 PYCR1P32322 319 aa8.18□□□□□ -1.1
SCFD1-220ENST00000556486 SLC15A1P46059 708 aa8.18□□□□□ -1.1
SCFD1-220ENST00000556486 TGM4P49221 684 aa8.18□□□□□ -1.1
SCFD1-220ENST00000556486 ARF6P62330 175 aa8.18□□□□□ -1.1
SCFD1-220ENST00000556486 GRB2P62993 217 aaKnown RBP8.18□□□□□ -1.1
SCFD1-220ENST00000556486 VAMP2P63027 116 aa8.18□□□□□ -1.1
SCFD1-220ENST00000556486 FAM3AP98173 230 aa8.18□□□□□ -1.1
SCFD1-220ENST00000556486 MICBQ29980 383 aa8.18□□□□□ -1.1
SCFD1-220ENST00000556486 SAMD4BQ5PRF9 694 aaKnown RBP8.18□□□□□ -1.1
SCFD1-220ENST00000556486 LINC01590Q5TEZ4 76 aa8.18□□□□□ -1.1
SCFD1-220ENST00000556486 WDR82Q6UXN9 313 aa8.18□□□□□ -1.1
SCFD1-220ENST00000556486 ZNF826PQ6ZT77 177 aa8.18□□□□□ -1.1
SCFD1-220ENST00000556486 SLC16A9Q7RTY1 509 aa8.18□□□□□ -1.1
SCFD1-220ENST00000556486 SLC36A1Q7Z2H8 476 aa8.18□□□□□ -1.1
SCFD1-220ENST00000556486 PGAM4Q8N0Y7 254 aa8.18□□□□□ -1.1
SCFD1-220ENST00000556486 RNF148Q8N7C7 305 aa8.18□□□□□ -1.1
SCFD1-220ENST00000556486 SLC37A3Q8NCC5 494 aa8.18□□□□□ -1.1
SCFD1-220ENST00000556486 OR52H1Q8NGJ2 320 aa8.18□□□□□ -1.1
SCFD1-220ENST00000556486 OR8D4Q8NGM9 314 aa8.18□□□□□ -1.1
SCFD1-220ENST00000556486 SLAMF6Q96DU3 332 aa8.18□□□□□ -1.1
SCFD1-220ENST00000556486 NSMCE2Q96MF7 247 aa8.18□□□□□ -1.1
SCFD1-220ENST00000556486 COPS4Q9BT78 406 aa8.18□□□□□ -1.1
SCFD1-220ENST00000556486 PPA2Q9H2U2 334 aa8.18□□□□□ -1.1
SCFD1-220ENST00000556486 MED4Q9NPJ6 270 aa8.18□□□□□ -1.1
SCFD1-220ENST00000556486 ZNRD1Q9P1U0 126 aa8.18□□□□□ -1.1
SCFD1-220ENST00000556486 VPREB3Q9UKI3 123 aa8.18□□□□□ -1.1
SCFD1-220ENST00000556486 PRPF19Q9UMS4 504 aaKnown RBP8.18□□□□□ -1.1
SCFD1-220ENST00000556486 BAIAP2Q9UQB8 552 aa8.18□□□□□ -1.1
SCFD1-220ENST00000556486 CAB39Q9Y376 341 aaPredicted RBP8.18□□□□□ -1.1
SCFD1-220ENST00000556486 LYVE1Q9Y5Y7 322 aa8.18□□□□□ -1.1
SCFD1-220ENST00000556486 hCG_38984A0A1B0GV85 526 aa8.17□□□□□ -1.1
SCFD1-220ENST00000556486 DHRS12A0PJE2 317 aa8.17□□□□□ -1.1
SCFD1-220ENST00000556486 ANKRD61A6NGH8 418 aa8.17□□□□□ -1.1
SCFD1-220ENST00000556486 TVP23AA6NH52 213 aa8.17□□□□□ -1.1
SCFD1-220ENST00000556486 APOC1P02654 83 aa8.17□□□□□ -1.1
SCFD1-220ENST00000556486 FBP1P09467 338 aa8.17□□□□□ -1.1
SCFD1-220ENST00000556486 SPI1P17947 270 aa8.17□□□□□ -1.1
SCFD1-220ENST00000556486 PRKXP51817 358 aa8.17□□□□□ -1.1
SCFD1-220ENST00000556486 CRMP1Q14194 572 aa8.17□□□□□ -1.1
SCFD1-220ENST00000556486 HERPUD1Q15011 391 aa8.17□□□□□ -1.1
SCFD1-220ENST00000556486 SNCBQ16143 134 aa8.17□□□□□ -1.1
SCFD1-220ENST00000556486 FAM76BQ5HYJ3 339 aa8.17□□□□□ -1.1
SCFD1-220ENST00000556486 DEFB121Q5J5C9 76 aa8.17□□□□□ -1.1
SCFD1-220ENST00000556486 WDR38Q5JTN6 314 aa8.17□□□□□ -1.1
SCFD1-220ENST00000556486 STUMQ69YW2 141 aa8.17□□□□□ -1.1
SCFD1-220ENST00000556486 KRT74Q7RTS7 529 aa8.17□□□□□ -1.1
SCFD1-220ENST00000556486 VMO1Q7Z5L0 202 aa8.17□□□□□ -1.1
SCFD1-220ENST00000556486 CMTM4Q8IZR5 234 aa8.17□□□□□ -1.1
SCFD1-220ENST00000556486 FGFRL1Q8N441 504 aa8.17□□□□□ -1.1
SCFD1-220ENST00000556486 PNKDQ8N490 385 aa8.17□□□□□ -1.1
SCFD1-220ENST00000556486 GALNT4Q8N4A0 578 aa8.17□□□□□ -1.1
SCFD1-220ENST00000556486 CSNK2A3Q8NEV1 391 aa8.17□□□□□ -1.1
SCFD1-220ENST00000556486 OR1M1Q8NGA1 313 aa8.17□□□□□ -1.1
SCFD1-220ENST00000556486 OR10Z1Q8NGY1 313 aa8.17□□□□□ -1.1
SCFD1-220ENST00000556486 OR8S1Q8NH09 359 aa8.17□□□□□ -1.1
SCFD1-220ENST00000556486 RNF133Q8WVZ7 376 aa8.17□□□□□ -1.1
SCFD1-220ENST00000556486 TNFRSF14Q92956 283 aa8.17□□□□□ -1.1
SCFD1-220ENST00000556486 ITFG2Q969R8 447 aa8.17□□□□□ -1.1
SCFD1-220ENST00000556486 SGK3Q96BR1 496 aa8.17□□□□□ -1.1
SCFD1-220ENST00000556486 CHCHD6Q9BRQ6 235 aa8.17□□□□□ -1.1
SCFD1-220ENST00000556486 MMP28Q9H239 520 aa8.17□□□□□ -1.1
SCFD1-220ENST00000556486 RGCCQ9H4X1 137 aa8.17□□□□□ -1.1
SCFD1-220ENST00000556486 SP140LQ9H930 580 aa8.17□□□□□ -1.1
SCFD1-220ENST00000556486 FAM96BQ9Y3D0 163 aa8.17□□□□□ -1.1
SCFD1-220ENST00000556486 V9GYQ6 96 aa8.17□□□□□ -1.1
SCFD1-220ENST00000556486 hCG_1807616A0A1W2PRN6 198 aa8.16□□□□□ -1.1
SCFD1-220ENST00000556486 K7EIL1 84 aa8.16□□□□□ -1.1
SCFD1-220ENST00000556486 ZNF593O00488 134 aaPredicted RBP8.16□□□□□ -1.1
SCFD1-220ENST00000556486 SNX3O60493 162 aa8.16□□□□□ -1.1
SCFD1-220ENST00000556486 TK1P04183 234 aa8.16□□□□□ -1.1
SCFD1-220ENST00000556486 SPARCP09486 303 aa8.16□□□□□ -1.1
SCFD1-220ENST00000556486 SLC2A1P11166 492 aa8.16□□□□□ -1.1
SCFD1-220ENST00000556486 GABRA5P31644 462 aa8.16□□□□□ -1.1
SCFD1-220ENST00000556486 TGFBR2P37173 567 aa8.16□□□□□ -1.1
SCFD1-220ENST00000556486 NAA10P41227 235 aaPredicted RBP8.16□□□□□ -1.1
SCFD1-220ENST00000556486 PTTG1IPP53801 180 aa8.16□□□□□ -1.1
SCFD1-220ENST00000556486 GP2P55259 537 aaKnown RBP8.16□□□□□ -1.1
SCFD1-220ENST00000556486 ACSM1Q08AH1 577 aa8.16□□□□□ -1.1
SCFD1-220ENST00000556486 KLHL12Q53G59 568 aa8.16□□□□□ -1.1
SCFD1-220ENST00000556486 HSP90B2PQ58FF3 399 aa8.16□□□□□ -1.1
SCFD1-220ENST00000556486 FTMTQ8N4E7 242 aa8.16□□□□□ -1.1
SCFD1-220ENST00000556486 KLHDC1Q8N7A1 406 aa8.16□□□□□ -1.1
SCFD1-220ENST00000556486 Q8N7P7 452 aa8.16□□□□□ -1.1
SCFD1-220ENST00000556486 OR2T33Q8NG76 320 aa8.16□□□□□ -1.1
SCFD1-220ENST00000556486 OR9Q2Q8NGE9 314 aa8.16□□□□□ -1.1
SCFD1-220ENST00000556486 OR51L1Q8NGJ5 315 aa8.16□□□□□ -1.1
SCFD1-220ENST00000556486 OR9Q1Q8NGQ5 310 aa8.16□□□□□ -1.1
SCFD1-220ENST00000556486 OR5R1Q8NH85 324 aa8.16□□□□□ -1.1
SCFD1-220ENST00000556486 LRRC29Q8WV35 223 aa8.16□□□□□ -1.1
SCFD1-220ENST00000556486 ST8SIA4Q92187 359 aa8.16□□□□□ -1.1
SCFD1-220ENST00000556486 DCTN5Q9BTE1 182 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms