RNA–Protein interactions for RNA: ENST00000556422.5

TMEM260-210, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 3,864 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-210ENST00000556422 SOSTQ9BQB4 213 aa4.52□□□□□ -1.69
TMEM260-210ENST00000556422 SRSF8Q9BRL6 282 aaKnown RBP4.52□□□□□ -1.69
TMEM260-210ENST00000556422 VN1R1Q9GZP7 353 aa4.52□□□□□ -1.69
TMEM260-210ENST00000556422 EXOSC3Q9NQT5 275 aaKnown RBP4.52□□□□□ -1.69
TMEM260-210ENST00000556422 STEAP1Q9UHE8 339 aa4.52□□□□□ -1.69
TMEM260-210ENST00000556422 OR52A1Q9UKL2 312 aa4.52□□□□□ -1.69
TMEM260-210ENST00000556422 IER3IP1Q9Y5U9 82 aa4.52□□□□□ -1.69
TMEM260-210ENST00000556422 COL27A1Q8IZC6 1860 aaPredicted RBP4.52□□□□□ -1.69
TMEM260-210ENST00000556422 ZFHX4Q86UP3 3567 aa4.52□□□□□ -1.69
TMEM260-210ENST00000556422 A8MXK9 166 aa4.52□□□□□ -1.69
TMEM260-210ENST00000556422 PRR32B1ATL7 298 aa4.52□□□□□ -1.69
TMEM260-210ENST00000556422 ORC5O43913 435 aa4.52□□□□□ -1.69
TMEM260-210ENST00000556422 TIAF1O95411 115 aa4.52□□□□□ -1.69
TMEM260-210ENST00000556422 ASAH2BP0C7U1 165 aa4.52□□□□□ -1.69
TMEM260-210ENST00000556422 PMCHP20382 165 aa4.52□□□□□ -1.69
TMEM260-210ENST00000556422 MNDAP41218 407 aa4.52□□□□□ -1.69
TMEM260-210ENST00000556422 SLC16A1P53985 500 aa4.52□□□□□ -1.69
TMEM260-210ENST00000556422 PNLIPRP2P54317 469 aa4.52□□□□□ -1.69
TMEM260-210ENST00000556422 HSF1Q00613 529 aa4.52□□□□□ -1.69
TMEM260-210ENST00000556422 ZNF117Q03924 483 aa4.52□□□□□ -1.69
TMEM260-210ENST00000556422 ZNF74Q16587 644 aa4.52□□□□□ -1.69
TMEM260-210ENST00000556422 BSXQ3C1V8 233 aa4.52□□□□□ -1.69
TMEM260-210ENST00000556422 LINC01590Q5TEZ4 76 aa4.52□□□□□ -1.69
TMEM260-210ENST00000556422 C1orf189Q5VU69 101 aa4.52□□□□□ -1.69
TMEM260-210ENST00000556422 DNM1P34Q6PK57 102 aa4.52□□□□□ -1.69
TMEM260-210ENST00000556422 LRRC28Q86X40 367 aaPredicted RBP4.52□□□□□ -1.69
TMEM260-210ENST00000556422 MARCH9Q86YJ5 346 aa4.52□□□□□ -1.69
TMEM260-210ENST00000556422 ZNF441Q8N8Z8 693 aa4.52□□□□□ -1.69
TMEM260-210ENST00000556422 OR5W2Q8NH69 310 aa4.52□□□□□ -1.69
TMEM260-210ENST00000556422 SMPDL3BQ92485 455 aa4.52□□□□□ -1.69
TMEM260-210ENST00000556422 ZMYND19Q96E35 227 aaPredicted RBP4.52□□□□□ -1.69
TMEM260-210ENST00000556422 GPR137Q96N19 417 aa4.52□□□□□ -1.69
TMEM260-210ENST00000556422 NMNAT3Q96T66 252 aa4.52□□□□□ -1.69
TMEM260-210ENST00000556422 TTTY10Q9BZA0 68 aa4.52□□□□□ -1.69
TMEM260-210ENST00000556422 STRADBQ9C0K7 418 aa4.52□□□□□ -1.69
TMEM260-210ENST00000556422 MEGF9Q9H1U4 602 aa4.52□□□□□ -1.69
TMEM260-210ENST00000556422 PLEKHA1Q9HB21 404 aa4.52□□□□□ -1.69
TMEM260-210ENST00000556422 INPP5EQ9NRR6 644 aa4.52□□□□□ -1.69
TMEM260-210ENST00000556422 FGF21Q9NSA1 209 aa4.52□□□□□ -1.69
TMEM260-210ENST00000556422 CBLN4Q9NTU7 201 aa4.52□□□□□ -1.69
TMEM260-210ENST00000556422 ZNF701Q9NV72 531 aaPredicted RBP4.52□□□□□ -1.69
TMEM260-210ENST00000556422 ST6GALNAC2Q9UJ37 374 aa4.52□□□□□ -1.69
TMEM260-210ENST00000556422 ZFP30Q9Y2G7 519 aa4.52□□□□□ -1.69
TMEM260-210ENST00000556422 FAM240BA0A1B0GVZ2 78 aa4.51□□□□□ -1.69
TMEM260-210ENST00000556422 A0A1B0GX78 115 aa4.51□□□□□ -1.69
TMEM260-210ENST00000556422 DAPL1A0PJW8 107 aa4.51□□□□□ -1.69
TMEM260-210ENST00000556422 ZNF726A6NNF4 738 aa4.51□□□□□ -1.69
TMEM260-210ENST00000556422 A8MWP6 167 aa4.51□□□□□ -1.69
TMEM260-210ENST00000556422 MKRN2OSH3BPM6 223 aa4.51□□□□□ -1.69
TMEM260-210ENST00000556422 GPR31O00270 319 aa4.51□□□□□ -1.69
TMEM260-210ENST00000556422 PPP1R2P9O14990 202 aa4.51□□□□□ -1.69
TMEM260-210ENST00000556422 SELENOFO60613 162 aa4.51□□□□□ -1.69
TMEM260-210ENST00000556422 ZNF354AO60765 605 aaPredicted RBP4.51□□□□□ -1.69
TMEM260-210ENST00000556422 CXCL12P48061 93 aa4.51□□□□□ -1.69
TMEM260-210ENST00000556422 KIAA0141Q14154 515 aaPredicted RBP4.51□□□□□ -1.69
TMEM260-210ENST00000556422 SF3A2Q15428 464 aaKnown RBP4.51□□□□□ -1.69
TMEM260-210ENST00000556422 OCIAD2Q56VL3 154 aa4.51□□□□□ -1.69
TMEM260-210ENST00000556422 DMKNQ6E0U4 476 aaPredicted RBP4.51□□□□□ -1.69
TMEM260-210ENST00000556422 OR6V1Q8N148 313 aa4.51□□□□□ -1.69
TMEM260-210ENST00000556422 OR2AK2Q8NG84 335 aa4.51□□□□□ -1.69
TMEM260-210ENST00000556422 PPP1R3EQ9H7J1 279 aa4.51□□□□□ -1.69
TMEM260-210ENST00000556422 FN3KRPQ9HA64 309 aa4.51□□□□□ -1.69
TMEM260-210ENST00000556422 FSCN3Q9NQT6 498 aa4.51□□□□□ -1.69
TMEM260-210ENST00000556422 RASL12Q9NYN1 266 aa4.51□□□□□ -1.69
TMEM260-210ENST00000556422 SUSD2Q9UGT4 822 aa4.51□□□□□ -1.69
TMEM260-210ENST00000556422 ZNF346Q9UL40 294 aaKnown RBP4.51□□□□□ -1.69
TMEM260-210ENST00000556422 ZNF337Q9Y3M9 751 aa4.51□□□□□ -1.69
TMEM260-210ENST00000556422 LOC400499M0QZD8 3231 aa4.51□□□□□ -1.69
TMEM260-210ENST00000556422 TECTAO75443 2155 aa4.51□□□□□ -1.69
TMEM260-210ENST00000556422 MED12Q93074 2177 aa4.51□□□□□ -1.69
TMEM260-210ENST00000556422 A0A0G2JK05 382 aa4.51□□□□□ -1.69
TMEM260-210ENST00000556422 A0A1W2PQM1 296 aa4.51□□□□□ -1.69
TMEM260-210ENST00000556422 OR5H14A6NHG9 310 aa4.51□□□□□ -1.69
TMEM260-210ENST00000556422 DCTN6O00399 190 aa4.51□□□□□ -1.69
TMEM260-210ENST00000556422 CASKO14936 926 aa4.51□□□□□ -1.69
TMEM260-210ENST00000556422 SNAPC5O75971 98 aa4.51□□□□□ -1.69
TMEM260-210ENST00000556422 BRI3O95415 125 aa4.51□□□□□ -1.69
TMEM260-210ENST00000556422 B4GALT1P15291 398 aa4.51□□□□□ -1.69
TMEM260-210ENST00000556422 FBLP22087 321 aaKnown RBP4.51□□□□□ -1.69
TMEM260-210ENST00000556422 SOX2P48431 317 aa4.51□□□□□ -1.69
TMEM260-210ENST00000556422 ARL4DP49703 201 aa4.51□□□□□ -1.69
TMEM260-210ENST00000556422 AKR1C2P52895 323 aa4.51□□□□□ -1.69
TMEM260-210ENST00000556422 RPS11P62280 158 aaKnown RBP eCLIP4.51□□□□□ -1.69
TMEM260-210ENST00000556422 SELENOTP62341 195 aa4.51□□□□□ -1.69
TMEM260-210ENST00000556422 NSDHLQ15738 373 aa4.51□□□□□ -1.69
TMEM260-210ENST00000556422 ABHD17BQ5VST6 288 aa4.51□□□□□ -1.69
TMEM260-210ENST00000556422 LAMTOR1Q6IAA8 161 aa4.51□□□□□ -1.69
TMEM260-210ENST00000556422 TMEM116Q8NCL8 245 aa4.51□□□□□ -1.69
TMEM260-210ENST00000556422 PELI1Q96FA3 418 aa4.51□□□□□ -1.69
TMEM260-210ENST00000556422 CXorf58Q96LI9 332 aa4.51□□□□□ -1.69
TMEM260-210ENST00000556422 SORCS2Q96PQ0 1159 aa4.51□□□□□ -1.69
TMEM260-210ENST00000556422 TMEM43Q9BTV4 400 aa4.51□□□□□ -1.69
TMEM260-210ENST00000556422 BEX1Q9HBH7 125 aa4.51□□□□□ -1.69
TMEM260-210ENST00000556422 RPS6KB2Q9UBS0 482 aa4.51□□□□□ -1.69
TMEM260-210ENST00000556422 PHF3Q92576 2039 aaKnown RBP4.51□□□□□ -1.69
TMEM260-210ENST00000556422 CDC14BO60729 498 aa4.51□□□□□ -1.69
TMEM260-210ENST00000556422 GLSO94925 669 aaPredicted RBP4.51□□□□□ -1.69
TMEM260-210ENST00000556422 YIF1AO95070 293 aa4.51□□□□□ -1.69
TMEM260-210ENST00000556422 LPLP06858 475 aa4.51□□□□□ -1.69
TMEM260-210ENST00000556422 GABRA1P14867 456 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms