RNA–Protein interactions for RNA: ENST00000556288.5

ATXN3-238, Transcript of ataxin 3, human

TSL 1 (best)

Gene ATXN3, Length 901 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATXN3-238	ENST00000556288	CYB5R2	Q6BCY4	276 aa		3.93	□□□□□ -1.78
ATXN3-238	ENST00000556288	KCTD18	Q6PI47	426 aa	Predicted RBP	3.93	□□□□□ -1.78
ATXN3-238	ENST00000556288	DRAM2	Q6UX65	266 aa		3.93	□□□□□ -1.78
ATXN3-238	ENST00000556288	KCTD8	Q6ZWB6	473 aa		3.93	□□□□□ -1.78
ATXN3-238	ENST00000556288	HIST2H3A	Q71DI3	136 aa		3.93	□□□□□ -1.78
ATXN3-238	ENST00000556288	BIVM	Q86UB2	503 aa		3.93	□□□□□ -1.78
ATXN3-238	ENST00000556288	SLC35F2	Q8IXU6	374 aa		3.93	□□□□□ -1.78
ATXN3-238	ENST00000556288	TIGD4	Q8IY51	512 aa		3.93	□□□□□ -1.78
ATXN3-238	ENST00000556288	ZNF786	Q8N393	782 aa		3.93	□□□□□ -1.78
ATXN3-238	ENST00000556288	DEFB108B	Q8NET1	73 aa		3.93	□□□□□ -1.78
ATXN3-238	ENST00000556288	OR8G5	Q8NG78	346 aa		3.93	□□□□□ -1.78
ATXN3-238	ENST00000556288	OR10AD1	Q8NGE0	317 aa		3.93	□□□□□ -1.78
ATXN3-238	ENST00000556288	OR10S1	Q8NGN2	331 aa		3.93	□□□□□ -1.78
ATXN3-238	ENST00000556288	OR8S1	Q8NH09	359 aa		3.93	□□□□□ -1.78
ATXN3-238	ENST00000556288	C10orf105	Q8TEF2	133 aa		3.93	□□□□□ -1.78
ATXN3-238	ENST00000556288	ITLN1	Q8WWA0	313 aa		3.93	□□□□□ -1.78
ATXN3-238	ENST00000556288	IGFBPL1	Q8WX77	278 aa		3.93	□□□□□ -1.78
ATXN3-238	ENST00000556288	PIGC	Q92535	297 aa		3.93	□□□□□ -1.78
ATXN3-238	ENST00000556288	RAB1C	Q92928	201 aa		3.93	□□□□□ -1.78
ATXN3-238	ENST00000556288	YIPF5	Q969M3	257 aa		3.93	□□□□□ -1.78
ATXN3-238	ENST00000556288	SGK3	Q96BR1	496 aa		3.93	□□□□□ -1.78
ATXN3-238	ENST00000556288	ELMOD3	Q96FG2	381 aa		3.93	□□□□□ -1.78
ATXN3-238	ENST00000556288	TIMD4	Q96H15	378 aa		3.93	□□□□□ -1.78
ATXN3-238	ENST00000556288	REEP6	Q96HR9	211 aa		3.93	□□□□□ -1.78
ATXN3-238	ENST00000556288	AMELY	Q99218	206 aa		3.93	□□□□□ -1.78
ATXN3-238	ENST00000556288	CNN2	Q99439	309 aa	Known RBP	3.93	□□□□□ -1.78
ATXN3-238	ENST00000556288	MRO	Q9BYG7	248 aa		3.93	□□□□□ -1.78
ATXN3-238	ENST00000556288	YIPF3	Q9GZM5	350 aa		3.93	□□□□□ -1.78
ATXN3-238	ENST00000556288	GABARAPL1	Q9H0R8	117 aa		3.93	□□□□□ -1.78
ATXN3-238	ENST00000556288	CHODL	Q9H9P2	273 aa		3.93	□□□□□ -1.78
ATXN3-238	ENST00000556288	AMBN	Q9NP70	447 aa		3.93	□□□□□ -1.78
ATXN3-238	ENST00000556288	ZNF275	Q9NSD4	429 aa	Predicted RBP	3.93	□□□□□ -1.78
ATXN3-238	ENST00000556288	NKIRAS2	Q9NYR9	191 aa		3.93	□□□□□ -1.78
ATXN3-238	ENST00000556288	PPP1R3C	Q9UQK1	317 aa		3.93	□□□□□ -1.78
ATXN3-238	ENST00000556288	CACNG2	Q9Y698	323 aa		3.93	□□□□□ -1.78
ATXN3-238	ENST00000556288	HIVEP1	P15822	2718 aa		3.92	□□□□□ -1.78
ATXN3-238	ENST00000556288	DSCAML1	Q8TD84	2053 aa		3.92	□□□□□ -1.78
ATXN3-238	ENST00000556288	IGLV3-9	A0A075B6K5	115 aa		3.92	□□□□□ -1.78
ATXN3-238	ENST00000556288	LOC100130705	A0A1B0GUX0	176 aa		3.92	□□□□□ -1.78
ATXN3-238	ENST00000556288	TMEM269	A0A1B0GVZ9	245 aa		3.92	□□□□□ -1.78
ATXN3-238	ENST00000556288	hCG_1807616	A0A1W2PRN6	198 aa		3.92	□□□□□ -1.78
ATXN3-238	ENST00000556288	DAPL1	A0PJW8	107 aa		3.92	□□□□□ -1.78
ATXN3-238	ENST00000556288	C5orf63	A6NC05	138 aa		3.92	□□□□□ -1.78
ATXN3-238	ENST00000556288		A6NIN4	97 aa		3.92	□□□□□ -1.78
ATXN3-238	ENST00000556288	ZSCAN5B	A6NJL1	495 aa		3.92	□□□□□ -1.78
ATXN3-238	ENST00000556288		A6NLC8	198 aa		3.92	□□□□□ -1.78
ATXN3-238	ENST00000556288	SNTN	A6NMZ2	147 aa		3.92	□□□□□ -1.78
ATXN3-238	ENST00000556288	CD300LB	A8K4G0	201 aa		3.92	□□□□□ -1.78
ATXN3-238	ENST00000556288	CLDN25	C9JDP6	229 aa		3.92	□□□□□ -1.78
ATXN3-238	ENST00000556288		J3QLW9	94 aa		3.92	□□□□□ -1.78
ATXN3-238	ENST00000556288	XRCC2	O43543	280 aa		3.92	□□□□□ -1.78
ATXN3-238	ENST00000556288	ENTPD6	O75354	484 aa		3.92	□□□□□ -1.78
ATXN3-238	ENST00000556288	ACTL6B	O94805	426 aa		3.92	□□□□□ -1.78
ATXN3-238	ENST00000556288	CYB5R3	P00387	301 aa	Predicted RBP	3.92	□□□□□ -1.78
ATXN3-238	ENST00000556288	ALPL	P05186	524 aa		3.92	□□□□□ -1.78
ATXN3-238	ENST00000556288	KRT8	P05787	483 aa		3.92	□□□□□ -1.78
ATXN3-238	ENST00000556288	ZNF19	P17023	458 aa		3.92	□□□□□ -1.78
ATXN3-238	ENST00000556288	SLC2A5	P22732	501 aa		3.92	□□□□□ -1.78
ATXN3-238	ENST00000556288	TUBG1	P23258	451 aa		3.92	□□□□□ -1.78
ATXN3-238	ENST00000556288	CALR	P27797	417 aa	Known RBP	3.92	□□□□□ -1.78
ATXN3-238	ENST00000556288	PSMB10	P40306	273 aa		3.92	□□□□□ -1.78
ATXN3-238	ENST00000556288	CRYBB2	P43320	205 aa		3.92	□□□□□ -1.78
ATXN3-238	ENST00000556288	SRP9	P49458	86 aa	Known RBP	3.92	□□□□□ -1.78
ATXN3-238	ENST00000556288	MMP15	P51511	669 aa		3.92	□□□□□ -1.78
ATXN3-238	ENST00000556288	TMEM33	P57088	247 aa		3.92	□□□□□ -1.78
ATXN3-238	ENST00000556288	RPL15	P61313	204 aa	Known RBP	3.92	□□□□□ -1.78
ATXN3-238	ENST00000556288	ELF3	P78545	371 aa	Predicted RBP	3.92	□□□□□ -1.78
ATXN3-238	ENST00000556288	SSBP2	P81877	361 aa	Predicted RBP	3.92	□□□□□ -1.78
ATXN3-238	ENST00000556288	DMRTC1	Q5HYR2	192 aa		3.92	□□□□□ -1.78
ATXN3-238	ENST00000556288	TEX30	Q5JUR7	227 aa		3.92	□□□□□ -1.78
ATXN3-238	ENST00000556288	NXNL2	Q5VZ03	156 aa		3.92	□□□□□ -1.78
ATXN3-238	ENST00000556288	C12orf73	Q69YU5	71 aa		3.92	□□□□□ -1.78
ATXN3-238	ENST00000556288	ZNF322	Q6U7Q0	402 aa	Predicted RBP	3.92	□□□□□ -1.78
ATXN3-238	ENST00000556288		Q6ZR03	302 aa		3.92	□□□□□ -1.78
ATXN3-238	ENST00000556288	PLEKHG7	Q6ZR37	379 aa		3.92	□□□□□ -1.78
ATXN3-238	ENST00000556288	MOB3C	Q70IA8	216 aa		3.92	□□□□□ -1.78
ATXN3-238	ENST00000556288	LHFPL3	Q86UP9	236 aa		3.92	□□□□□ -1.78
ATXN3-238	ENST00000556288	MOGAT3	Q86VF5	341 aa		3.92	□□□□□ -1.78
ATXN3-238	ENST00000556288	GID4	Q8IVV7	300 aa		3.92	□□□□□ -1.78
ATXN3-238	ENST00000556288	PARP8	Q8N3A8	854 aa		3.92	□□□□□ -1.78
ATXN3-238	ENST00000556288	DHRSX	Q8N5I4	330 aa		3.92	□□□□□ -1.78
ATXN3-238	ENST00000556288	C19orf18	Q8NEA5	215 aa		3.92	□□□□□ -1.78
ATXN3-238	ENST00000556288	OR8J1	Q8NGP2	316 aa		3.92	□□□□□ -1.78
ATXN3-238	ENST00000556288	OR11L1	Q8NGX0	322 aa		3.92	□□□□□ -1.78
ATXN3-238	ENST00000556288	OTOS	Q8NHW6	89 aa		3.92	□□□□□ -1.78
ATXN3-238	ENST00000556288	ZNF420	Q8TAQ5	688 aa	Predicted RBP	3.92	□□□□□ -1.78
ATXN3-238	ENST00000556288	ST7L	Q8TDW4	575 aa		3.92	□□□□□ -1.78
ATXN3-238	ENST00000556288	ASB17	Q8WXJ9	295 aa		3.92	□□□□□ -1.78
ATXN3-238	ENST00000556288	RPL36AL	Q969Q0	106 aa	Known RBP	3.92	□□□□□ -1.78
ATXN3-238	ENST00000556288	RNFT2	Q96EX2	444 aa		3.92	□□□□□ -1.78
ATXN3-238	ENST00000556288	FAM71F1	Q96KD3	344 aa	Predicted RBP	3.92	□□□□□ -1.78
ATXN3-238	ENST00000556288		Q96MT0	163 aa		3.92	□□□□□ -1.78
ATXN3-238	ENST00000556288	OR2V2	Q96R30	315 aa		3.92	□□□□□ -1.78
ATXN3-238	ENST00000556288	SIGLEC11	Q96RL6	698 aa		3.92	□□□□□ -1.78
ATXN3-238	ENST00000556288	ABHD14A	Q9BUJ0	271 aa		3.92	□□□□□ -1.78
ATXN3-238	ENST00000556288	C1QTNF5	Q9BXJ0	243 aa		3.92	□□□□□ -1.78
ATXN3-238	ENST00000556288	BPESC1	Q9GZL8	116 aa		3.92	□□□□□ -1.78
ATXN3-238	ENST00000556288	MYOZ1	Q9NP98	299 aa	Predicted RBP	3.92	□□□□□ -1.78
ATXN3-238	ENST00000556288	PNRC2	Q9NPJ4	139 aa	Known RBP	3.92	□□□□□ -1.78
ATXN3-238	ENST00000556288	TUBG2	Q9NRH3	451 aa		3.92	□□□□□ -1.78

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