RNA–Protein interactions for RNA: ENST00000556096.6

VPS33B-205, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-205ENST00000556096 RAD51DO75771 328 aa12.69□□□□□ -0.38
VPS33B-205ENST00000556096 LYZL6O75951 148 aa12.69□□□□□ -0.38
VPS33B-205ENST00000556096 CYB5AP00167 134 aa12.69□□□□□ -0.38
VPS33B-205ENST00000556096 CD74P04233 296 aa12.69□□□□□ -0.38
VPS33B-205ENST00000556096 CD3DP04234 171 aa12.69□□□□□ -0.38
VPS33B-205ENST00000556096 HOXD4P09016 255 aaPredicted RBP12.69□□□□□ -0.38
VPS33B-205ENST00000556096 TMEM225BP0DP42 221 aa12.69□□□□□ -0.38
VPS33B-205ENST00000556096 HIST1H1DP16402 221 aaKnown RBP12.69□□□□□ -0.38
VPS33B-205ENST00000556096 GNB3P16520 340 aa12.69□□□□□ -0.38
VPS33B-205ENST00000556096 WNT5AP41221 380 aa12.69□□□□□ -0.38
VPS33B-205ENST00000556096 TBC1D28Q2M2D7 210 aa12.69□□□□□ -0.38
VPS33B-205ENST00000556096 PLCXD3Q63HM9 321 aa12.69□□□□□ -0.38
VPS33B-205ENST00000556096 RTL6Q6ICC9 239 aa12.69□□□□□ -0.38
VPS33B-205ENST00000556096 PXT1Q8NFP0 134 aa12.69□□□□□ -0.38
VPS33B-205ENST00000556096 OR56B2PQ8NGI1 322 aa12.69□□□□□ -0.38
VPS33B-205ENST00000556096 OR51T1Q8NGJ9 327 aa12.69□□□□□ -0.38
VPS33B-205ENST00000556096 STARD4Q96DR4 205 aa12.69□□□□□ -0.38
VPS33B-205ENST00000556096 WBP1Q96G27 269 aa12.69□□□□□ -0.38
VPS33B-205ENST00000556096 PTTG3PQ9NZH4 202 aa12.69□□□□□ -0.38
VPS33B-205ENST00000556096 PROCRQ9UNN8 238 aa12.69□□□□□ -0.38
VPS33B-205ENST00000556096 CHD6Q8TD26 2715 aa12.69□□□□□ -0.38
VPS33B-205ENST00000556096 FIGNL2A6NMB9 653 aa12.68□□□□□ -0.38
VPS33B-205ENST00000556096 SERPINA2P20848 420 aa12.68□□□□□ -0.38
VPS33B-205ENST00000556096 CPT2P23786 658 aa12.68□□□□□ -0.38
VPS33B-205ENST00000556096 MECP2P51608 486 aaKnown RBP12.68□□□□□ -0.38
VPS33B-205ENST00000556096 PER3P56645 1201 aa12.68□□□□□ -0.38
VPS33B-205ENST00000556096 MRPL49Q13405 166 aaKnown RBP12.68□□□□□ -0.38
VPS33B-205ENST00000556096 ARL6IP1Q15041 203 aa12.68□□□□□ -0.38
VPS33B-205ENST00000556096 PRR30Q53SZ7 412 aaPredicted RBP12.68□□□□□ -0.38
VPS33B-205ENST00000556096 PLAC9Q5JTB6 97 aa12.68□□□□□ -0.38
VPS33B-205ENST00000556096 ATAD3CQ5T2N8 411 aa12.68□□□□□ -0.38
VPS33B-205ENST00000556096 C1orf185Q5T7R7 199 aa12.68□□□□□ -0.38
VPS33B-205ENST00000556096 FAAP20Q6NZ36 180 aa12.68□□□□□ -0.38
VPS33B-205ENST00000556096 ZNF782Q6ZMW2 699 aaPredicted RBP12.68□□□□□ -0.38
VPS33B-205ENST00000556096 TRAPPC6BQ86SZ2 158 aa12.68□□□□□ -0.38
VPS33B-205ENST00000556096 FTMTQ8N4E7 242 aa12.68□□□□□ -0.38
VPS33B-205ENST00000556096 DOCK7Q96N67 2140 aa12.68□□□□□ -0.38
VPS33B-205ENST00000556096 IL36GQ9NZH8 169 aa12.68□□□□□ -0.38
VPS33B-205ENST00000556096 ZNF850A8MQ14 1090 aa12.68□□□□□ -0.38
VPS33B-205ENST00000556096 ZNF736B4DX44 427 aaPredicted RBP12.68□□□□□ -0.38
VPS33B-205ENST00000556096 MFNGO00587 321 aa12.68□□□□□ -0.38
VPS33B-205ENST00000556096 RAB3DO95716 219 aa12.68□□□□□ -0.38
VPS33B-205ENST00000556096 TPOP07202 933 aa12.68□□□□□ -0.38
VPS33B-205ENST00000556096 CBR1P16152 277 aa12.68□□□□□ -0.38
VPS33B-205ENST00000556096 TIMP3P35625 211 aa12.68□□□□□ -0.38
VPS33B-205ENST00000556096 PDZK1IP1Q13113 114 aa12.68□□□□□ -0.38
VPS33B-205ENST00000556096 P2RY6Q15077 328 aa12.68□□□□□ -0.38
VPS33B-205ENST00000556096 RBMS2Q15434 407 aaKnown RBP12.68□□□□□ -0.38
VPS33B-205ENST00000556096 C17orf78Q8N4C9 275 aa12.68□□□□□ -0.38
VPS33B-205ENST00000556096 OR4D10Q8NGI6 311 aa12.68□□□□□ -0.38
VPS33B-205ENST00000556096 OR10K1Q8NGX5 313 aa12.68□□□□□ -0.38
VPS33B-205ENST00000556096 FAM57AQ8TBR7 257 aa12.68□□□□□ -0.38
VPS33B-205ENST00000556096 ELL3Q9HB65 397 aaPredicted RBP12.68□□□□□ -0.38
VPS33B-205ENST00000556096 NPDC1Q9NQX5 325 aaPredicted RBP12.68□□□□□ -0.38
VPS33B-205ENST00000556096 PCDHB16Q9NRJ7 776 aa12.68□□□□□ -0.38
VPS33B-205ENST00000556096 NKIRAS2Q9NYR9 191 aa12.68□□□□□ -0.38
VPS33B-205ENST00000556096 ANAPC10Q9UM13 185 aa12.68□□□□□ -0.38
VPS33B-205ENST00000556096 KCNK7Q9Y2U2 307 aa12.68□□□□□ -0.38
VPS33B-205ENST00000556096 FAM215AQ9Y5M1 114 aa12.68□□□□□ -0.38
VPS33B-205ENST00000556096 SVILO95425 2214 aa12.67□□□□□ -0.38
VPS33B-205ENST00000556096 SSX5O60225 188 aa12.67□□□□□ -0.38
VPS33B-205ENST00000556096 CA11O75493 328 aa12.67□□□□□ -0.38
VPS33B-205ENST00000556096 TOXO94900 526 aa12.67□□□□□ -0.38
VPS33B-205ENST00000556096 GNG2P59768 71 aa12.67□□□□□ -0.38
VPS33B-205ENST00000556096 PRDX4Q13162 271 aa12.67□□□□□ -0.38
VPS33B-205ENST00000556096 HLXQ14774 488 aaPredicted RBP12.67□□□□□ -0.38
VPS33B-205ENST00000556096 RSU1Q15404 277 aa12.67□□□□□ -0.38
VPS33B-205ENST00000556096 CEACAM21Q3KPI0 293 aa12.67□□□□□ -0.38
VPS33B-205ENST00000556096 BEND4Q6ZU67 534 aa12.67□□□□□ -0.38
VPS33B-205ENST00000556096 ZNF610Q8N9Z0 462 aa12.67□□□□□ -0.38
VPS33B-205ENST00000556096 WDR31Q8NA23 367 aa12.67□□□□□ -0.38
VPS33B-205ENST00000556096 ZSCAN4Q8NAM6 433 aaPredicted RBP12.67□□□□□ -0.38
VPS33B-205ENST00000556096 OR8S1Q8NH09 359 aa12.67□□□□□ -0.38
VPS33B-205ENST00000556096 NUDCD2Q8WVJ2 157 aa12.67□□□□□ -0.38
VPS33B-205ENST00000556096 GIMAP1Q8WWP7 306 aa12.67□□□□□ -0.38
VPS33B-205ENST00000556096 DVL3Q92997 716 aaPredicted RBP12.67□□□□□ -0.38
VPS33B-205ENST00000556096 MRPS24Q96EL2 167 aaKnown RBP12.67□□□□□ -0.38
VPS33B-205ENST00000556096 POM121Q96HA1 1249 aa12.67□□□□□ -0.38
VPS33B-205ENST00000556096 MED30Q96HR3 178 aa12.67□□□□□ -0.38
VPS33B-205ENST00000556096 Q96M66 194 aa12.67□□□□□ -0.38
VPS33B-205ENST00000556096 OR10A4Q9H209 315 aa12.67□□□□□ -0.38
VPS33B-205ENST00000556096 OR51J1Q9H342 316 aa12.67□□□□□ -0.38
VPS33B-205ENST00000556096 POFUT1Q9H488 388 aa12.67□□□□□ -0.38
VPS33B-205ENST00000556096 OBP2BQ9NPH6 170 aa12.67□□□□□ -0.38
VPS33B-205ENST00000556096 EIF3KQ9UBQ5 218 aaKnown RBP12.67□□□□□ -0.38
VPS33B-205ENST00000556096 FLVCR2Q9UPI3 526 aa12.67□□□□□ -0.38
VPS33B-205ENST00000556096 PQLC2LA1A4F0 135 aa12.66□□□□□ -0.38
VPS33B-205ENST00000556096 CD300LBA8K4G0 201 aa12.66□□□□□ -0.38
VPS33B-205ENST00000556096 ARPC1BO15143 372 aaKnown RBP12.66□□□□□ -0.38
VPS33B-205ENST00000556096 IL2RAP01589 272 aa12.66□□□□□ -0.38
VPS33B-205ENST00000556096 CSTBP04080 98 aaKnown RBP12.66□□□□□ -0.38
VPS33B-205ENST00000556096 SFTPCP11686 197 aa12.66□□□□□ -0.38
VPS33B-205ENST00000556096 NAT1P18440 290 aa12.66□□□□□ -0.38
VPS33B-205ENST00000556096 TBPP20226 339 aa12.66□□□□□ -0.38
VPS33B-205ENST00000556096 HOXC12P31275 282 aa12.66□□□□□ -0.38
VPS33B-205ENST00000556096 CBX5P45973 191 aa12.66□□□□□ -0.38
VPS33B-205ENST00000556096 GTF3C1Q12789 2109 aa12.66□□□□□ -0.38
VPS33B-205ENST00000556096 KLRB1Q12918 225 aa12.66□□□□□ -0.38
VPS33B-205ENST00000556096 MEF2DQ14814 521 aa12.66□□□□□ -0.38
VPS33B-205ENST00000556096 CD276Q5ZPR3 534 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms