RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 GSTK1Q9Y2Q3 226 aa6.46□□□□□ -1.38
TDP1-214ENST00000556063 APCP25054 2843 aa6.45□□□□□ -1.38
TDP1-214ENST00000556063 DOCK11Q5JSL3 2073 aa6.45□□□□□ -1.38
TDP1-214ENST00000556063 IGHV3-64DA0A0J9YX35 117 aa6.45□□□□□ -1.38
TDP1-214ENST00000556063 LOC100289279A0A1B0GTE1 492 aa6.45□□□□□ -1.38
TDP1-214ENST00000556063 TRDV1A0A1B0GX56 115 aa6.45□□□□□ -1.38
TDP1-214ENST00000556063 A0A1W2PPK0 400 aa6.45□□□□□ -1.38
TDP1-214ENST00000556063 J3QT63 122 aa6.45□□□□□ -1.38
TDP1-214ENST00000556063 GABRPO00591 440 aa6.45□□□□□ -1.38
TDP1-214ENST00000556063 PPIHO43447 177 aaKnown RBP6.45□□□□□ -1.38
TDP1-214ENST00000556063 LY6HO94772 140 aa6.45□□□□□ -1.38
TDP1-214ENST00000556063 HEXAP06865 529 aa6.45□□□□□ -1.38
TDP1-214ENST00000556063 SLC25A16P16260 332 aa6.45□□□□□ -1.38
TDP1-214ENST00000556063 CD36P16671 472 aa6.45□□□□□ -1.38
TDP1-214ENST00000556063 MYL9P24844 172 aa6.45□□□□□ -1.38
TDP1-214ENST00000556063 COL8A2P25067 703 aa6.45□□□□□ -1.38
TDP1-214ENST00000556063 GIFP27352 417 aa6.45□□□□□ -1.38
TDP1-214ENST00000556063 BDKRB2P30411 391 aa6.45□□□□□ -1.38
TDP1-214ENST00000556063 THBS2P35442 1172 aa6.45□□□□□ -1.38
TDP1-214ENST00000556063 CFHR2P36980 270 aa6.45□□□□□ -1.38
TDP1-214ENST00000556063 HAAOP46952 286 aa6.45□□□□□ -1.38
TDP1-214ENST00000556063 PSMD7P51665 324 aa6.45□□□□□ -1.38
TDP1-214ENST00000556063 MPPED2Q15777 294 aa6.45□□□□□ -1.38
TDP1-214ENST00000556063 KCNJ8Q15842 424 aa6.45□□□□□ -1.38
TDP1-214ENST00000556063 SSX1Q16384 188 aa6.45□□□□□ -1.38
TDP1-214ENST00000556063 DDI2Q5TDH0 399 aa6.45□□□□□ -1.38
TDP1-214ENST00000556063 GDPGP1Q6ZNW5 385 aa6.45□□□□□ -1.38
TDP1-214ENST00000556063 CDH26Q8IXH8 852 aa6.45□□□□□ -1.38
TDP1-214ENST00000556063 MKXQ8IYA7 352 aa6.45□□□□□ -1.38
TDP1-214ENST00000556063 MUC20Q8N307 709 aaPredicted RBP6.45□□□□□ -1.38
TDP1-214ENST00000556063 NKAIN3Q8N8D7 197 aa6.45□□□□□ -1.38
TDP1-214ENST00000556063 SCCPDHQ8NBX0 429 aa6.45□□□□□ -1.38
TDP1-214ENST00000556063 OR10Z1Q8NGY1 313 aa6.45□□□□□ -1.38
TDP1-214ENST00000556063 YIPF5Q969M3 257 aa6.45□□□□□ -1.38
TDP1-214ENST00000556063 FOXRED1Q96CU9 486 aaPredicted RBP6.45□□□□□ -1.38
TDP1-214ENST00000556063 GPER1Q99527 375 aa6.45□□□□□ -1.38
TDP1-214ENST00000556063 PKIBQ9C010 78 aa6.45□□□□□ -1.38
TDP1-214ENST00000556063 TLNRD1Q9H1K6 362 aa6.45□□□□□ -1.38
TDP1-214ENST00000556063 OR51I2Q9H344 312 aa6.45□□□□□ -1.38
TDP1-214ENST00000556063 PPP1R3EQ9H7J1 279 aa6.45□□□□□ -1.38
TDP1-214ENST00000556063 EXOSC4Q9NPD3 245 aaKnown RBP6.45□□□□□ -1.38
TDP1-214ENST00000556063 PCDHB16Q9NRJ7 776 aa6.45□□□□□ -1.38
TDP1-214ENST00000556063 SNTG1Q9NSN8 517 aa6.45□□□□□ -1.38
TDP1-214ENST00000556063 STUB1Q9UNE7 303 aa6.45□□□□□ -1.38
TDP1-214ENST00000556063 SF3B6Q9Y3B4 125 aaKnown RBP6.45□□□□□ -1.38
TDP1-214ENST00000556063 TANC2Q9HCD6 1990 aa6.45□□□□□ -1.38
TDP1-214ENST00000556063 HRNRQ86YZ3 2850 aaPredicted RBP6.44□□□□□ -1.38
TDP1-214ENST00000556063 PPIAL4EA0A075B759 164 aa6.44□□□□□ -1.38
TDP1-214ENST00000556063 TRAV38-1A0A0B4J264 116 aa6.44□□□□□ -1.38
TDP1-214ENST00000556063 IGKV1-9A0A0C4DH69 117 aa6.44□□□□□ -1.38
TDP1-214ENST00000556063 PPIAL4DF5H284 164 aa6.44□□□□□ -1.38
TDP1-214ENST00000556063 LYNX1G3V0Z9 82 aa6.44□□□□□ -1.38
TDP1-214ENST00000556063 TMEM178BH3BS89 294 aa6.44□□□□□ -1.38
TDP1-214ENST00000556063 CDIPTO14735 213 aa6.44□□□□□ -1.38
TDP1-214ENST00000556063 PDCD5O14737 125 aa6.44□□□□□ -1.38
TDP1-214ENST00000556063 RP2O75695 350 aa6.44□□□□□ -1.38
TDP1-214ENST00000556063 SC5DO75845 299 aa6.44□□□□□ -1.38
TDP1-214ENST00000556063 FSTL3O95633 263 aa6.44□□□□□ -1.38
TDP1-214ENST00000556063 MAS1P04201 325 aa6.44□□□□□ -1.38
TDP1-214ENST00000556063 ACAA1P09110 424 aaPredicted RBP6.44□□□□□ -1.38
TDP1-214ENST00000556063 UCHL1P09936 223 aa6.44□□□□□ -1.38
TDP1-214ENST00000556063 SMIM18P0DKX4 95 aa6.44□□□□□ -1.38
TDP1-214ENST00000556063 PPIAL4FP0DN26 164 aa6.44□□□□□ -1.38
TDP1-214ENST00000556063 TMEM225BP0DP42 221 aa6.44□□□□□ -1.38
TDP1-214ENST00000556063 LYNX1P0DP58 116 aa6.44□□□□□ -1.38
TDP1-214ENST00000556063 IGFBP3P17936 291 aaPredicted RBP6.44□□□□□ -1.38
TDP1-214ENST00000556063 SRMP19623 302 aa6.44□□□□□ -1.38
TDP1-214ENST00000556063 CPT2P23786 658 aa6.44□□□□□ -1.38
TDP1-214ENST00000556063 FGF9P31371 208 aaPredicted RBP6.44□□□□□ -1.38
TDP1-214ENST00000556063 ZNF93P35789 620 aaPredicted RBP6.44□□□□□ -1.38
TDP1-214ENST00000556063 MDH2P40926 338 aaKnown RBP6.44□□□□□ -1.38
TDP1-214ENST00000556063 POU3F4P49335 361 aa6.44□□□□□ -1.38
TDP1-214ENST00000556063 GP2P55259 537 aaKnown RBP6.44□□□□□ -1.38
TDP1-214ENST00000556063 FABP5Q01469 135 aa6.44□□□□□ -1.38
TDP1-214ENST00000556063 IL24Q13007 206 aa6.44□□□□□ -1.38
TDP1-214ENST00000556063 KISS1Q15726 138 aa6.44□□□□□ -1.38
TDP1-214ENST00000556063 SPRNQ5BIV9 151 aa6.44□□□□□ -1.38
TDP1-214ENST00000556063 DMRTC1Q5HYR2 192 aa6.44□□□□□ -1.38
TDP1-214ENST00000556063 GLT8D1Q68CQ7 371 aa6.44□□□□□ -1.38
TDP1-214ENST00000556063 ZNF529Q6P280 563 aa6.44□□□□□ -1.38
TDP1-214ENST00000556063 CD200R1LQ6Q8B3 271 aa6.44□□□□□ -1.38
TDP1-214ENST00000556063 FIP1L1Q6UN15 594 aaKnown RBP6.44□□□□□ -1.38
TDP1-214ENST00000556063 WDR82Q6UXN9 313 aa6.44□□□□□ -1.38
TDP1-214ENST00000556063 GPR141Q7Z602 305 aa6.44□□□□□ -1.38
TDP1-214ENST00000556063 WDR86Q86TI4 376 aa6.44□□□□□ -1.38
TDP1-214ENST00000556063 SATL1Q86VE3 508 aa6.44□□□□□ -1.38
TDP1-214ENST00000556063 Q8IYB0 196 aa6.44□□□□□ -1.38
TDP1-214ENST00000556063 SAXO1Q8IYX7 474 aa6.44□□□□□ -1.38
TDP1-214ENST00000556063 SPICQ8N5J4 248 aa6.44□□□□□ -1.38
TDP1-214ENST00000556063 BOLLQ8N9W6 283 aaKnown RBP6.44□□□□□ -1.38
TDP1-214ENST00000556063 ZSCAN4Q8NAM6 433 aaPredicted RBP6.44□□□□□ -1.38
TDP1-214ENST00000556063 ZNF420Q8TAQ5 688 aaPredicted RBP6.44□□□□□ -1.38
TDP1-214ENST00000556063 C10orf105Q8TEF2 133 aa6.44□□□□□ -1.38
TDP1-214ENST00000556063 LRRC29Q8WV35 223 aa6.44□□□□□ -1.38
TDP1-214ENST00000556063 AQP3Q92482 292 aa6.44□□□□□ -1.38
TDP1-214ENST00000556063 RPL3LQ92901 407 aaKnown RBP6.44□□□□□ -1.38
TDP1-214ENST00000556063 S100A13Q99584 98 aa6.44□□□□□ -1.38
TDP1-214ENST00000556063 RASL12Q9NYN1 266 aa6.44□□□□□ -1.38
TDP1-214ENST00000556063 TREM2Q9NZC2 230 aa6.44□□□□□ -1.38
TDP1-214ENST00000556063 PPIAL4AQ9Y536 164 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms