RNA–Protein interactions for RNA: ENST00000555964.5

XRCC3-215, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4

Gene XRCC3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-215ENST00000555964 RPL31P62899 125 aaKnown RBP13.78□□□□□ -0.2
XRCC3-215ENST00000555964 CEACAM21Q3KPI0 293 aa13.78□□□□□ -0.2
XRCC3-215ENST00000555964 CD300LDQ6UXZ3 194 aa13.78□□□□□ -0.2
XRCC3-215ENST00000555964 CYP2R1Q6VVX0 501 aa13.78□□□□□ -0.2
XRCC3-215ENST00000555964 Q6ZPA2 131 aa13.78□□□□□ -0.2
XRCC3-215ENST00000555964 DEFB107AQ8IZN7 70 aa13.78□□□□□ -0.2
XRCC3-215ENST00000555964 ZNF561Q8N587 486 aa13.78□□□□□ -0.2
XRCC3-215ENST00000555964 MRAPQ8TCY5 172 aa13.78□□□□□ -0.2
XRCC3-215ENST00000555964 RORBQ92753 470 aa13.78□□□□□ -0.2
XRCC3-215ENST00000555964 FOXRED1Q96CU9 486 aaPredicted RBP13.78□□□□□ -0.2
XRCC3-215ENST00000555964 AMELYQ99218 206 aa13.78□□□□□ -0.2
XRCC3-215ENST00000555964 OR51I2Q9H344 312 aa13.78□□□□□ -0.2
XRCC3-215ENST00000555964 MED20Q9H944 212 aa13.78□□□□□ -0.2
XRCC3-215ENST00000555964 ELL3Q9HB65 397 aaPredicted RBP13.78□□□□□ -0.2
XRCC3-215ENST00000555964 ZNF222Q9UK12 451 aa13.78□□□□□ -0.2
XRCC3-215ENST00000555964 U3KQV3 271 aa13.78□□□□□ -0.2
XRCC3-215ENST00000555964 A0A0U1RQV5 110 aa13.77□□□□□ -0.21
XRCC3-215ENST00000555964 PRR23D1E9PI22 279 aaPredicted RBP13.77□□□□□ -0.21
XRCC3-215ENST00000555964 PRODHO43272 600 aa13.77□□□□□ -0.21
XRCC3-215ENST00000555964 PEX14O75381 377 aa13.77□□□□□ -0.21
XRCC3-215ENST00000555964 RHBDL1O75783 438 aa13.77□□□□□ -0.21
XRCC3-215ENST00000555964 PRR23D2P0DMB1 279 aaPredicted RBP13.77□□□□□ -0.21
XRCC3-215ENST00000555964 MNAT1P51948 309 aa13.77□□□□□ -0.21
XRCC3-215ENST00000555964 FAM98BQ52LJ0 330 aaKnown RBP13.77□□□□□ -0.21
XRCC3-215ENST00000555964 ZBTB37Q5TC79 503 aa13.77□□□□□ -0.21
XRCC3-215ENST00000555964 CRIP3Q6Q6R5 217 aa13.77□□□□□ -0.21
XRCC3-215ENST00000555964 KRT74Q7RTS7 529 aa13.77□□□□□ -0.21
XRCC3-215ENST00000555964 COMMD2Q86X83 199 aa13.77□□□□□ -0.21
XRCC3-215ENST00000555964 NDUFA11Q86Y39 141 aa13.77□□□□□ -0.21
XRCC3-215ENST00000555964 MKXQ8IYA7 352 aa13.77□□□□□ -0.21
XRCC3-215ENST00000555964 OR10G2Q8NGC3 310 aa13.77□□□□□ -0.21
XRCC3-215ENST00000555964 OR8B12Q8NGG6 310 aa13.77□□□□□ -0.21
XRCC3-215ENST00000555964 OR5A2Q8NGI9 324 aa13.77□□□□□ -0.21
XRCC3-215ENST00000555964 C17orf50Q8WW18 174 aa13.77□□□□□ -0.21
XRCC3-215ENST00000555964 NKX3-1Q99801 234 aaPredicted RBP13.77□□□□□ -0.21
XRCC3-215ENST00000555964 TEX12Q9BXU0 123 aa13.77□□□□□ -0.21
XRCC3-215ENST00000555964 FAM107BQ9H098 131 aa13.77□□□□□ -0.21
XRCC3-215ENST00000555964 ABCB10Q9NRK6 738 aa13.77□□□□□ -0.21
XRCC3-215ENST00000555964 C19orf12Q9NSK7 152 aa13.77□□□□□ -0.21
XRCC3-215ENST00000555964 NECAP2Q9NVZ3 263 aa13.77□□□□□ -0.21
XRCC3-215ENST00000555964 PITPNC1Q9UKF7 332 aa13.77□□□□□ -0.21
XRCC3-215ENST00000555964 GSC2O15499 205 aa13.76□□□□□ -0.21
XRCC3-215ENST00000555964 SNX3O60493 162 aa13.76□□□□□ -0.21
XRCC3-215ENST00000555964 MTRF1O75570 445 aaKnown RBP13.76□□□□□ -0.21
XRCC3-215ENST00000555964 TFF1P04155 84 aa13.76□□□□□ -0.21
XRCC3-215ENST00000555964 ALDOBP05062 364 aa13.76□□□□□ -0.21
XRCC3-215ENST00000555964 FAHP16930 419 aa13.76□□□□□ -0.21
XRCC3-215ENST00000555964 LOXL3P58215 753 aa13.76□□□□□ -0.21
XRCC3-215ENST00000555964 RIPPLY1Q0D2K3 151 aa13.76□□□□□ -0.21
XRCC3-215ENST00000555964 CEP78Q5JTW2 689 aa13.76□□□□□ -0.21
XRCC3-215ENST00000555964 SLC35D3Q5M8T2 416 aa13.76□□□□□ -0.21
XRCC3-215ENST00000555964 KCTD18Q6PI47 426 aaPredicted RBP13.76□□□□□ -0.21
XRCC3-215ENST00000555964 HAGHLQ6PII5 290 aaPredicted RBP13.76□□□□□ -0.21
XRCC3-215ENST00000555964 KRT77Q7Z794 578 aa13.76□□□□□ -0.21
XRCC3-215ENST00000555964 CALHM1Q8IU99 346 aa13.76□□□□□ -0.21
XRCC3-215ENST00000555964 ARHGAP24Q8N264 748 aa13.76□□□□□ -0.21
XRCC3-215ENST00000555964 AQP3Q92482 292 aa13.76□□□□□ -0.21
XRCC3-215ENST00000555964 LYZL4Q96KX0 146 aa13.76□□□□□ -0.21
XRCC3-215ENST00000555964 C1orf21Q9H246 121 aa13.76□□□□□ -0.21
XRCC3-215ENST00000555964 YY1AP1Q9H869 796 aa13.76□□□□□ -0.21
XRCC3-215ENST00000555964 LAMP5Q9UJQ1 280 aa13.76□□□□□ -0.21
XRCC3-215ENST00000555964 POLDIP2Q9Y2S7 368 aa13.76□□□□□ -0.21
XRCC3-215ENST00000555964 DSCAML1Q8TD84 2053 aa13.75□□□□□ -0.21
XRCC3-215ENST00000555964 ARRDC5A6NEK1 342 aa13.75□□□□□ -0.21
XRCC3-215ENST00000555964 VGLL3A8MV65 326 aa13.75□□□□□ -0.21
XRCC3-215ENST00000555964 SELENOFO60613 162 aa13.75□□□□□ -0.21
XRCC3-215ENST00000555964 HMGN1P05114 100 aa13.75□□□□□ -0.21
XRCC3-215ENST00000555964 ATP6V1B2P21281 511 aa13.75□□□□□ -0.21
XRCC3-215ENST00000555964 COX7A1P24310 79 aa13.75□□□□□ -0.21
XRCC3-215ENST00000555964 BMXP51813 675 aa13.75□□□□□ -0.21
XRCC3-215ENST00000555964 PPP1R8Q12972 351 aaKnown RBP13.75□□□□□ -0.21
XRCC3-215ENST00000555964 NSUN5P1Q3KNT7 163 aa13.75□□□□□ -0.21
XRCC3-215ENST00000555964 LCN1P1Q5VSP4 162 aa13.75□□□□□ -0.21
XRCC3-215ENST00000555964 PLCXD3Q63HM9 321 aa13.75□□□□□ -0.21
XRCC3-215ENST00000555964 PLBD1Q6P4A8 553 aa13.75□□□□□ -0.21
XRCC3-215ENST00000555964 DEGS2Q6QHC5 323 aa13.75□□□□□ -0.21
XRCC3-215ENST00000555964 ACP7Q6ZNF0 438 aa13.75□□□□□ -0.21
XRCC3-215ENST00000555964 IQCF1Q8N6M8 205 aa13.75□□□□□ -0.21
XRCC3-215ENST00000555964 POC1AQ8NBT0 407 aa13.75□□□□□ -0.21
XRCC3-215ENST00000555964 RPS4Y2Q8TD47 263 aa13.75□□□□□ -0.21
XRCC3-215ENST00000555964 GIPC3Q8TF64 312 aa13.75□□□□□ -0.21
XRCC3-215ENST00000555964 SGCDQ92629 289 aa13.75□□□□□ -0.21
XRCC3-215ENST00000555964 AJUBAQ96IF1 538 aa13.75□□□□□ -0.21
XRCC3-215ENST00000555964 FGF23Q9GZV9 251 aaPredicted RBP13.75□□□□□ -0.21
XRCC3-215ENST00000555964 ENPP5Q9UJA9 477 aa13.75□□□□□ -0.21
XRCC3-215ENST00000555964 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.75□□□□□ -0.21
XRCC3-215ENST00000555964 TBL2Q9Y4P3 447 aaKnown RBP13.75□□□□□ -0.21
XRCC3-215ENST00000555964 RFPL4AA6NLU0 287 aa13.74□□□□□ -0.21
XRCC3-215ENST00000555964 RFPL4AL1F8VTS6 287 aa13.74□□□□□ -0.21
XRCC3-215ENST00000555964 H3BUI4 141 aa13.74□□□□□ -0.21
XRCC3-215ENST00000555964 CHST1O43916 411 aa13.74□□□□□ -0.21
XRCC3-215ENST00000555964 PRB2P02812 416 aaPredicted RBP13.74□□□□□ -0.21
XRCC3-215ENST00000555964 RPS7P62081 194 aaKnown RBP13.74□□□□□ -0.21
XRCC3-215ENST00000555964 CNN3Q15417 329 aaKnown RBP13.74□□□□□ -0.21
XRCC3-215ENST00000555964 HIST2H2BDQ6DRA6 164 aa13.74□□□□□ -0.21
XRCC3-215ENST00000555964 LCN8Q6JVE9 175 aa13.74□□□□□ -0.21
XRCC3-215ENST00000555964 DHFR2Q86XF0 187 aa13.74□□□□□ -0.21
XRCC3-215ENST00000555964 ZNF573Q86YE8 665 aa13.74□□□□□ -0.21
XRCC3-215ENST00000555964 Q8N2B8 174 aa13.74□□□□□ -0.21
XRCC3-215ENST00000555964 OR2T27Q8NH04 317 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms