RNA–Protein interactions for RNA: ENST00000555746.5

SRP54-209, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-209ENST00000555746 CACNA1CQ13936 2221 aa2.5□□□□□ -2.01
SRP54-209ENST00000555746 MYO7BQ6PIF6 2116 aa2.5□□□□□ -2.01
SRP54-209ENST00000555746 TMEM131Q92545 1883 aa2.5□□□□□ -2.01
SRP54-209ENST00000555746 KIAA1549LQ6ZVL6 1849 aa2.49□□□□□ -2.01
SRP54-209ENST00000555746 PCM1Q15154 2024 aa2.49□□□□□ -2.01
SRP54-209ENST00000555746 PRRC2CQ9Y520 2896 aaKnown RBP2.49□□□□□ -2.01
SRP54-209ENST00000555746 IGHV3-35A0A0C4DH35 117 aa2.49□□□□□ -2.01
SRP54-209ENST00000555746 KBTBD11-OT1A0A1B0GTJ5 212 aa2.49□□□□□ -2.01
SRP54-209ENST00000555746 MYBPHLA2RUH7 354 aa2.49□□□□□ -2.01
SRP54-209ENST00000555746 FRG2CA6NGY1 282 aa2.49□□□□□ -2.01
SRP54-209ENST00000555746 ZNF99A8MXY4 864 aaPredicted RBP2.49□□□□□ -2.01
SRP54-209ENST00000555746 C9J4A7 227 aa2.49□□□□□ -2.01
SRP54-209ENST00000555746 G3V3Y1 287 aa2.49□□□□□ -2.01
SRP54-209ENST00000555746 M0QXV9 152 aa2.49□□□□□ -2.01
SRP54-209ENST00000555746 DFFAO00273 331 aa2.49□□□□□ -2.01
SRP54-209ENST00000555746 SLC22A1O15245 554 aa2.49□□□□□ -2.01
SRP54-209ENST00000555746 SIVA1O15304 175 aa2.49□□□□□ -2.01
SRP54-209ENST00000555746 LATO43561 262 aa2.49□□□□□ -2.01
SRP54-209ENST00000555746 FADS1O60427 444 aa2.49□□□□□ -2.01
SRP54-209ENST00000555746 UGT1A9O60656 530 aa2.49□□□□□ -2.01
SRP54-209ENST00000555746 EIF1BO60739 113 aaKnown RBP2.49□□□□□ -2.01
SRP54-209ENST00000555746 RAMP3O60896 148 aa2.49□□□□□ -2.01
SRP54-209ENST00000555746 OR2J3O76001 311 aa2.49□□□□□ -2.01
SRP54-209ENST00000555746 CTDNEP1O95476 244 aa2.49□□□□□ -2.01
SRP54-209ENST00000555746 ANP32DO95626 131 aa2.49□□□□□ -2.01
SRP54-209ENST00000555746 IFNA21P01568 189 aa2.49□□□□□ -2.01
SRP54-209ENST00000555746 PPBPP02775 128 aa2.49□□□□□ -2.01
SRP54-209ENST00000555746 GIG44P09565 113 aaPredicted RBP2.49□□□□□ -2.01
SRP54-209ENST00000555746 ADRB3P13945 408 aa2.49□□□□□ -2.01
SRP54-209ENST00000555746 CPN1P15169 458 aa2.49□□□□□ -2.01
SRP54-209ENST00000555746 PGAM2P15259 253 aa2.49□□□□□ -2.01
SRP54-209ENST00000555746 NPR2P20594 1047 aa2.49□□□□□ -2.01
SRP54-209ENST00000555746 FASP25445 335 aa2.49□□□□□ -2.01
SRP54-209ENST00000555746 KRTAP5-9P26371 169 aa2.49□□□□□ -2.01
SRP54-209ENST00000555746 HTR2CP28335 458 aa2.49□□□□□ -2.01
SRP54-209ENST00000555746 LAP3P28838 519 aa2.49□□□□□ -2.01
SRP54-209ENST00000555746 RCVRNP35243 200 aa2.49□□□□□ -2.01
SRP54-209ENST00000555746 EIF1P41567 113 aaKnown RBP2.49□□□□□ -2.01
SRP54-209ENST00000555746 CRYBB2P43320 205 aa2.49□□□□□ -2.01
SRP54-209ENST00000555746 RFX3P48380 749 aa2.49□□□□□ -2.01
SRP54-209ENST00000555746 CYB561P49447 251 aa2.49□□□□□ -2.01
SRP54-209ENST00000555746 EMDP50402 254 aa2.49□□□□□ -2.01
SRP54-209ENST00000555746 RAB13P51153 203 aa2.49□□□□□ -2.01
SRP54-209ENST00000555746 XKP51811 444 aa2.49□□□□□ -2.01
SRP54-209ENST00000555746 AP2S1P53680 142 aaPredicted RBP2.49□□□□□ -2.01
SRP54-209ENST00000555746 PLP1P60201 277 aa2.49□□□□□ -2.01
SRP54-209ENST00000555746 TIMM10P62072 90 aa2.49□□□□□ -2.01
SRP54-209ENST00000555746 LSM6P62312 80 aaKnown RBP2.49□□□□□ -2.01
SRP54-209ENST00000555746 VLDLRP98155 873 aa2.49□□□□□ -2.01
SRP54-209ENST00000555746 TFAMQ00059 246 aaKnown RBP2.49□□□□□ -2.01
SRP54-209ENST00000555746 AESQ08117 197 aa2.49□□□□□ -2.01
SRP54-209ENST00000555746 BNIP2Q12982 314 aa2.49□□□□□ -2.01
SRP54-209ENST00000555746 RAB31Q13636 194 aa2.49□□□□□ -2.01
SRP54-209ENST00000555746 GANABQ14697 944 aaKnown RBP2.49□□□□□ -2.01
SRP54-209ENST00000555746 SLC10A1Q14973 349 aa2.49□□□□□ -2.01
SRP54-209ENST00000555746 PTGES3Q15185 160 aaKnown RBP2.49□□□□□ -2.01
SRP54-209ENST00000555746 TAF1AQ15573 450 aaPredicted RBP2.49□□□□□ -2.01
SRP54-209ENST00000555746 OR4D1Q15615 310 aa2.49□□□□□ -2.01
SRP54-209ENST00000555746 TNXAQ16473 311 aa2.49□□□□□ -2.01
SRP54-209ENST00000555746 SYPL1Q16563 259 aa2.49□□□□□ -2.01
SRP54-209ENST00000555746 POU2AF1Q16633 256 aa2.49□□□□□ -2.01
SRP54-209ENST00000555746 KCTD19Q17RG1 926 aaPredicted RBP2.49□□□□□ -2.01
SRP54-209ENST00000555746 RFX4Q33E94 735 aa2.49□□□□□ -2.01
SRP54-209ENST00000555746 GLYR1Q49A26 553 aaPredicted RBP2.49□□□□□ -2.01
SRP54-209ENST00000555746 GCSAMLQ5JQS6 135 aa2.49□□□□□ -2.01
SRP54-209ENST00000555746 SPIN3Q5JUX0 258 aa2.49□□□□□ -2.01
SRP54-209ENST00000555746 SLC22A10Q63ZE4 541 aa2.49□□□□□ -2.01
SRP54-209ENST00000555746 LPCAT4Q643R3 524 aa2.49□□□□□ -2.01
SRP54-209ENST00000555746 OR4F3Q6IEY1 312 aa2.49□□□□□ -2.01
SRP54-209ENST00000555746 ADNP2Q6IQ32 1131 aa2.49□□□□□ -2.01
SRP54-209ENST00000555746 SPESP1Q6UW49 350 aa2.49□□□□□ -2.01
SRP54-209ENST00000555746 BTNL3Q6UXE8 466 aa2.49□□□□□ -2.01
SRP54-209ENST00000555746 C2orf66Q6UXQ4 117 aa2.49□□□□□ -2.01
SRP54-209ENST00000555746 TMPRSS11AQ6ZMR5 421 aa2.49□□□□□ -2.01
SRP54-209ENST00000555746 STAC2Q6ZMT1 411 aa2.49□□□□□ -2.01
SRP54-209ENST00000555746 ACOT7LQ6ZUV0 252 aa2.49□□□□□ -2.01
SRP54-209ENST00000555746 ABHD13Q7L211 337 aa2.49□□□□□ -2.01
SRP54-209ENST00000555746 HDDC2Q7Z4H3 204 aa2.49□□□□□ -2.01
SRP54-209ENST00000555746 RALGPS2Q86X27 583 aaPredicted RBP2.49□□□□□ -2.01
SRP54-209ENST00000555746 PHF13Q86YI8 300 aaPredicted RBP2.49□□□□□ -2.01
SRP54-209ENST00000555746 CALHM1Q8IU99 346 aa2.49□□□□□ -2.01
SRP54-209ENST00000555746 TRAPPC5Q8IUR0 188 aa2.49□□□□□ -2.01
SRP54-209ENST00000555746 PUSL1Q8N0Z8 303 aaKnown RBP2.49□□□□□ -2.01
SRP54-209ENST00000555746 STX19Q8N4C7 294 aa2.49□□□□□ -2.01
SRP54-209ENST00000555746 MREGQ8N565 214 aa2.49□□□□□ -2.01
SRP54-209ENST00000555746 CSNK1A1LQ8N752 337 aa2.49□□□□□ -2.01
SRP54-209ENST00000555746 Q8N9G6 341 aaPredicted RBP2.49□□□□□ -2.01
SRP54-209ENST00000555746 INO80EQ8NBZ0 244 aaPredicted RBP2.49□□□□□ -2.01
SRP54-209ENST00000555746 PXT1Q8NFP0 134 aa2.49□□□□□ -2.01
SRP54-209ENST00000555746 OR51D1Q8NGF3 324 aa2.49□□□□□ -2.01
SRP54-209ENST00000555746 OR51G2Q8NGK0 314 aa2.49□□□□□ -2.01
SRP54-209ENST00000555746 OR11L1Q8NGX0 322 aa2.49□□□□□ -2.01
SRP54-209ENST00000555746 LGALS14Q8TCE9 139 aa2.49□□□□□ -2.01
SRP54-209ENST00000555746 CA5BP1Q8WTZ4 195 aa2.49□□□□□ -2.01
SRP54-209ENST00000555746 RPL3LQ92901 407 aaKnown RBP2.49□□□□□ -2.01
SRP54-209ENST00000555746 ART4Q93070 314 aa2.49□□□□□ -2.01
SRP54-209ENST00000555746 YIPF5Q969M3 257 aa2.49□□□□□ -2.01
SRP54-209ENST00000555746 MARC2Q969Z3 335 aa2.49□□□□□ -2.01
SRP54-209ENST00000555746 PPWD1Q96BP3 646 aaKnown RBP2.49□□□□□ -2.01
SRP54-209ENST00000555746 C8orf44Q96CB5 159 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms