RNA–Protein interactions for RNA: ENST00000555550.1

SCFD1-216, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-216ENST00000555550 CIB2O75838 187 aa1.1□□□□□ -2.23
SCFD1-216ENST00000555550 CDK1P06493 297 aa1.1□□□□□ -2.23
SCFD1-216ENST00000555550 GZMHP20718 246 aa1.1□□□□□ -2.23
SCFD1-216ENST00000555550 TUBG1P23258 451 aa1.1□□□□□ -2.23
SCFD1-216ENST00000555550 RGS8P57771 180 aaPredicted RBP1.1□□□□□ -2.23
SCFD1-216ENST00000555550 IRF8Q02556 426 aa1.1□□□□□ -2.23
SCFD1-216ENST00000555550 INCA1Q0VD86 236 aa1.1□□□□□ -2.23
SCFD1-216ENST00000555550 ITIH4Q14624 930 aa1.1□□□□□ -2.23
SCFD1-216ENST00000555550 HSDL1Q3SXM5 330 aa1.1□□□□□ -2.23
SCFD1-216ENST00000555550 WDR82Q6UXN9 313 aa1.1□□□□□ -2.23
SCFD1-216ENST00000555550 TMEM25Q86YD3 366 aa1.1□□□□□ -2.23
SCFD1-216ENST00000555550 JAGN1Q8N5M9 183 aa1.1□□□□□ -2.23
SCFD1-216ENST00000555550 WDR31Q8NA23 367 aa1.1□□□□□ -2.23
SCFD1-216ENST00000555550 OR52K2Q8NGK3 314 aa1.1□□□□□ -2.23
SCFD1-216ENST00000555550 RXFP2Q8WXD0 754 aa1.1□□□□□ -2.23
SCFD1-216ENST00000555550 TOP1MTQ969P6 601 aa1.1□□□□□ -2.23
SCFD1-216ENST00000555550 RDH12Q96NR8 316 aa1.1□□□□□ -2.23
SCFD1-216ENST00000555550 GSDMAQ96QA5 445 aa1.1□□□□□ -2.23
SCFD1-216ENST00000555550 PANX1Q96RD7 426 aa1.1□□□□□ -2.23
SCFD1-216ENST00000555550 FANCEQ9HB96 536 aa1.1□□□□□ -2.23
SCFD1-216ENST00000555550 TUBG2Q9NRH3 451 aa1.1□□□□□ -2.23
SCFD1-216ENST00000555550 NDRG2Q9UN36 371 aaKnown RBP1.1□□□□□ -2.23
SCFD1-216ENST00000555550 RP1L1Q8IWN7 2480 aaPredicted RBP1.1□□□□□ -2.23
SCFD1-216ENST00000555550 IGHV6-1A0A0B4J1U7 121 aa1.09□□□□□ -2.23
SCFD1-216ENST00000555550 TRGV4A0A0C4DH28 118 aa1.09□□□□□ -2.23
SCFD1-216ENST00000555550 ZNF99A8MXY4 864 aaPredicted RBP1.09□□□□□ -2.23
SCFD1-216ENST00000555550 ZBTB5O15062 677 aa1.09□□□□□ -2.23
SCFD1-216ENST00000555550 HMMRO75330 724 aa1.09□□□□□ -2.23
SCFD1-216ENST00000555550 TACSTD2P09758 323 aa1.09□□□□□ -2.23
SCFD1-216ENST00000555550 GALP22466 123 aa1.09□□□□□ -2.23
SCFD1-216ENST00000555550 CXCR1P25024 350 aa1.09□□□□□ -2.23
SCFD1-216ENST00000555550 HMOX2P30519 316 aa1.09□□□□□ -2.23
SCFD1-216ENST00000555550 UBE2MP61081 183 aaKnown RBP1.09□□□□□ -2.23
SCFD1-216ENST00000555550 ARMC12Q5T9G4 340 aa1.09□□□□□ -2.23
SCFD1-216ENST00000555550 ZNF322Q6U7Q0 402 aaPredicted RBP1.09□□□□□ -2.23
SCFD1-216ENST00000555550 CENPQQ7L2Z9 268 aaPredicted RBP1.09□□□□□ -2.23
SCFD1-216ENST00000555550 TAS2R42Q7RTR8 314 aa1.09□□□□□ -2.23
SCFD1-216ENST00000555550 SLC30A8Q8IWU4 369 aa1.09□□□□□ -2.23
SCFD1-216ENST00000555550 OR4C5Q8NGB2 326 aa1.09□□□□□ -2.23
SCFD1-216ENST00000555550 C8orf44Q96CB5 159 aa1.09□□□□□ -2.23
SCFD1-216ENST00000555550 CRLF2Q9HC73 371 aa1.09□□□□□ -2.23
SCFD1-216ENST00000555550 ZNF160Q9HCG1 818 aa1.09□□□□□ -2.23
SCFD1-216ENST00000555550 TREX1Q9NSU2 369 aa1.09□□□□□ -2.23
SCFD1-216ENST00000555550 ZNF257Q9Y2Q1 563 aa1.09□□□□□ -2.23
SCFD1-216ENST00000555550 SAR1BQ9Y6B6 198 aa1.09□□□□□ -2.23
SCFD1-216ENST00000555550 ELP1O95163 1332 aa1.09□□□□□ -2.24
SCFD1-216ENST00000555550 MROH7Q68CQ1 1323 aa1.09□□□□□ -2.24
SCFD1-216ENST00000555550 ICE1Q9Y2F5 2266 aa1.08□□□□□ -2.24
SCFD1-216ENST00000555550 TRAV25A0A0B4J276 109 aa1.08□□□□□ -2.24
SCFD1-216ENST00000555550 SLC31A1O15431 190 aa1.08□□□□□ -2.24
SCFD1-216ENST00000555550 CTNSO60931 367 aa1.08□□□□□ -2.24
SCFD1-216ENST00000555550 SLC6A1P30531 599 aa1.08□□□□□ -2.24
SCFD1-216ENST00000555550 RPS5P46782 204 aaKnown RBP1.08□□□□□ -2.24
SCFD1-216ENST00000555550 CLDN8P56748 225 aa1.08□□□□□ -2.24
SCFD1-216ENST00000555550 OR2B8PP59922 312 aa1.08□□□□□ -2.24
SCFD1-216ENST00000555550 ZNF33AQ06730 810 aa1.08□□□□□ -2.24
SCFD1-216ENST00000555550 STEAP4Q687X5 459 aa1.08□□□□□ -2.24
SCFD1-216ENST00000555550 KRTAP5-10Q6L8G5 202 aa1.08□□□□□ -2.24
SCFD1-216ENST00000555550 CLEC2AQ6UVW9 174 aa1.08□□□□□ -2.24
SCFD1-216ENST00000555550 COMTD1Q86VU5 262 aa1.08□□□□□ -2.24
SCFD1-216ENST00000555550 OFCC1Q8IZS5 231 aa1.08□□□□□ -2.24
SCFD1-216ENST00000555550 BBS5Q8N3I7 341 aa1.08□□□□□ -2.24
SCFD1-216ENST00000555550 ZDHHC22Q8N966 263 aa1.08□□□□□ -2.24
SCFD1-216ENST00000555550 OR2M7Q8NG81 312 aa1.08□□□□□ -2.24
SCFD1-216ENST00000555550 OR4K13Q8NH42 304 aa1.08□□□□□ -2.24
SCFD1-216ENST00000555550 OR51F2Q8NH61 342 aa1.08□□□□□ -2.24
SCFD1-216ENST00000555550 FAM57AQ8TBR7 257 aa1.08□□□□□ -2.24
SCFD1-216ENST00000555550 TSEN15Q8WW01 171 aaKnown RBP1.08□□□□□ -2.24
SCFD1-216ENST00000555550 FXYD5Q96DB9 178 aa1.08□□□□□ -2.24
SCFD1-216ENST00000555550 NAPGQ99747 312 aaPredicted RBP1.08□□□□□ -2.24
SCFD1-216ENST00000555550 TMEM185BQ9H7F4 350 aa1.08□□□□□ -2.24
SCFD1-216ENST00000555550 AUNIPQ9H7T9 357 aa1.08□□□□□ -2.24
SCFD1-216ENST00000555550 GEMIN7Q9H840 131 aaKnown RBP1.08□□□□□ -2.24
SCFD1-216ENST00000555550 ABCB9Q9NP78 766 aa1.08□□□□□ -2.24
SCFD1-216ENST00000555550 MRPS30Q9NP92 439 aaKnown RBP1.08□□□□□ -2.24
SCFD1-216ENST00000555550 PRSS16Q9NQE7 514 aa1.08□□□□□ -2.24
SCFD1-216ENST00000555550 TMEM100Q9NV29 134 aa1.08□□□□□ -2.24
SCFD1-216ENST00000555550 DDX18Q9NVP1 670 aaKnown RBP1.08□□□□□ -2.24
SCFD1-216ENST00000555550 AHNAKQ09666 5890 aaKnown RBP1.08□□□□□ -2.24
SCFD1-216ENST00000555550 TTC41PQ6P2S7 1318 aa1.08□□□□□ -2.24
SCFD1-216ENST00000555550 WDR19Q8NEZ3 1342 aa1.08□□□□□ -2.24
SCFD1-216ENST00000555550 BRD4O60885 1362 aaPredicted RBP1.08□□□□□ -2.24
SCFD1-216ENST00000555550 A0A0B4J2C4 111 aa1.07□□□□□ -2.24
SCFD1-216ENST00000555550 CTAGE15A4D2H0 777 aa1.07□□□□□ -2.24
SCFD1-216ENST00000555550 H0YIV9 168 aa1.07□□□□□ -2.24
SCFD1-216ENST00000555550 MPHOSPH10O00566 681 aaKnown RBP1.07□□□□□ -2.24
SCFD1-216ENST00000555550 ERI3O43414 337 aaKnown RBP1.07□□□□□ -2.24
SCFD1-216ENST00000555550 TDP2O95551 362 aa1.07□□□□□ -2.24
SCFD1-216ENST00000555550 KRT14P02533 472 aa1.07□□□□□ -2.24
SCFD1-216ENST00000555550 OR8G3PP0DMU2 310 aa1.07□□□□□ -2.24
SCFD1-216ENST00000555550 NBL1P41271 181 aa1.07□□□□□ -2.24
SCFD1-216ENST00000555550 CCL23P55773 120 aa1.07□□□□□ -2.24
SCFD1-216ENST00000555550 C21orf59P57076 290 aa1.07□□□□□ -2.24
SCFD1-216ENST00000555550 TWF2Q6IBS0 349 aaKnown RBP1.07□□□□□ -2.24
SCFD1-216ENST00000555550 ASCL4Q6XD76 172 aa1.07□□□□□ -2.24
SCFD1-216ENST00000555550 Q6ZQT7 251 aa1.07□□□□□ -2.24
SCFD1-216ENST00000555550 CTAGE6Q86UF2 777 aa1.07□□□□□ -2.24
SCFD1-216ENST00000555550 FAM81AQ8TBF8 368 aa1.07□□□□□ -2.24
SCFD1-216ENST00000555550 ORAOV1Q8WV07 137 aa1.07□□□□□ -2.24
SCFD1-216ENST00000555550 RCN3Q96D15 328 aa1.07□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms