RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 ANKRA2Q9H9E1 313 aa0.66□□□□□ -2.3
SNX6-204ENST00000555541 UBN2Q6ZU65 1347 aa0.65□□□□□ -2.3
SNX6-204ENST00000555541 ADGRB3O60242 1522 aa0.65□□□□□ -2.31
SNX6-204ENST00000555541 OTOFQ9HC10 1997 aa0.65□□□□□ -2.31
SNX6-204ENST00000555541 A0A0B4J2C4 111 aa0.65□□□□□ -2.31
SNX6-204ENST00000555541 FFAR1O14842 300 aa0.65□□□□□ -2.31
SNX6-204ENST00000555541 PTHP01270 115 aa0.65□□□□□ -2.31
SNX6-204ENST00000555541 FTH1P02794 183 aa0.65□□□□□ -2.31
SNX6-204ENST00000555541 PTHLHP12272 177 aa0.65□□□□□ -2.31
SNX6-204ENST00000555541 NUDT2P50583 147 aa0.65□□□□□ -2.31
SNX6-204ENST00000555541 AP1S2P56377 157 aa0.65□□□□□ -2.31
SNX6-204ENST00000555541 ADIGQ0VDE8 80 aa0.65□□□□□ -2.31
SNX6-204ENST00000555541 TRMT5Q32P41 509 aaKnown RBP0.65□□□□□ -2.31
SNX6-204ENST00000555541 OR2T5Q6IEZ7 315 aa0.65□□□□□ -2.31
SNX6-204ENST00000555541 NAA40Q86UY6 237 aa0.65□□□□□ -2.31
SNX6-204ENST00000555541 VKORC1L1Q8N0U8 176 aa0.65□□□□□ -2.31
SNX6-204ENST00000555541 DEFB119Q8N690 84 aa0.65□□□□□ -2.31
SNX6-204ENST00000555541 ZDHHC22Q8N966 263 aa0.65□□□□□ -2.31
SNX6-204ENST00000555541 OR2T29Q8NH02 315 aa0.65□□□□□ -2.31
SNX6-204ENST00000555541 OR4K13Q8NH42 304 aa0.65□□□□□ -2.31
SNX6-204ENST00000555541 ASZ1Q8WWH4 475 aa0.65□□□□□ -2.31
SNX6-204ENST00000555541 RXFP2Q8WXD0 754 aa0.65□□□□□ -2.31
SNX6-204ENST00000555541 RNF170Q96K19 258 aa0.65□□□□□ -2.31
SNX6-204ENST00000555541 PPP1R36Q96LQ0 422 aa0.65□□□□□ -2.31
SNX6-204ENST00000555541 TTTY12Q9BZ98 90 aa0.65□□□□□ -2.31
SNX6-204ENST00000555541 ABCB9Q9NP78 766 aa0.65□□□□□ -2.31
SNX6-204ENST00000555541 ASB3Q9Y575 518 aa0.65□□□□□ -2.31
SNX6-204ENST00000555541 PLXNB3Q9ULL4 1909 aa0.65□□□□□ -2.31
SNX6-204ENST00000555541 COL4A1P02462 1669 aa0.65□□□□□ -2.31
SNX6-204ENST00000555541 ZNF608Q9ULD9 1512 aaPredicted RBP0.64□□□□□ -2.31
SNX6-204ENST00000555541 C19orf71A6NCJ1 209 aa0.64□□□□□ -2.31
SNX6-204ENST00000555541 LINC01619G3V211 115 aa0.64□□□□□ -2.31
SNX6-204ENST00000555541 LY6LH3BQJ8 138 aa0.64□□□□□ -2.31
SNX6-204ENST00000555541 MYL12BO14950 172 aa0.64□□□□□ -2.31
SNX6-204ENST00000555541 RNF13O43567 381 aa0.64□□□□□ -2.31
SNX6-204ENST00000555541 CCNB2O95067 398 aa0.64□□□□□ -2.31
SNX6-204ENST00000555541 ANGP03950 147 aaKnown RBP0.64□□□□□ -2.31
SNX6-204ENST00000555541 GTF2E2P29084 291 aaKnown RBP0.64□□□□□ -2.31
SNX6-204ENST00000555541 ZNF140P52738 457 aaPredicted RBP0.64□□□□□ -2.31
SNX6-204ENST00000555541 ATP5IP56385 69 aaPredicted RBP0.64□□□□□ -2.31
SNX6-204ENST00000555541 FOXF1Q12946 379 aa0.64□□□□□ -2.31
SNX6-204ENST00000555541 PRDX4Q13162 271 aa0.64□□□□□ -2.31
SNX6-204ENST00000555541 TFDP2Q14188 446 aa0.64□□□□□ -2.31
SNX6-204ENST00000555541 RWDD4Q6NW29 188 aaKnown RBP0.64□□□□□ -2.31
SNX6-204ENST00000555541 SLC22A9Q8IVM8 553 aa0.64□□□□□ -2.31
SNX6-204ENST00000555541 OR8K1Q8NGG5 319 aa0.64□□□□□ -2.31
SNX6-204ENST00000555541 ORAOV1Q8WV07 137 aa0.64□□□□□ -2.31
SNX6-204ENST00000555541 Q96MT0 163 aa0.64□□□□□ -2.31
SNX6-204ENST00000555541 NAPGQ99747 312 aaPredicted RBP0.64□□□□□ -2.31
SNX6-204ENST00000555541 C20orf24Q9BUV8 137 aa0.64□□□□□ -2.31
SNX6-204ENST00000555541 NDRG2Q9UN36 371 aaKnown RBP0.64□□□□□ -2.31
SNX6-204ENST00000555541 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP0.64□□□□□ -2.31
SNX6-204ENST00000555541 GMNCA6NCL1 334 aa0.63□□□□□ -2.31
SNX6-204ENST00000555541 H0Y8G0 127 aa0.63□□□□□ -2.31
SNX6-204ENST00000555541 SULT1E1P49888 294 aa0.63□□□□□ -2.31
SNX6-204ENST00000555541 AMN1Q8IY45 258 aa0.63□□□□□ -2.31
SNX6-204ENST00000555541 OR56A4Q8NGH8 313 aa0.63□□□□□ -2.31
SNX6-204ENST00000555541 OR51F2Q8NH61 342 aa0.63□□□□□ -2.31
SNX6-204ENST00000555541 APOBEC3DQ96AK3 386 aaPredicted RBP0.63□□□□□ -2.31
SNX6-204ENST00000555541 APH1AQ96BI3 265 aa0.63□□□□□ -2.31
SNX6-204ENST00000555541 C8orf44Q96CB5 159 aa0.63□□□□□ -2.31
SNX6-204ENST00000555541 OR8B2Q96RD0 313 aa0.63□□□□□ -2.31
SNX6-204ENST00000555541 TGS1Q96RS0 853 aaKnown RBP0.63□□□□□ -2.31
SNX6-204ENST00000555541 NUP58Q9BVL2 599 aa0.63□□□□□ -2.31
SNX6-204ENST00000555541 EXTL2Q9UBQ6 330 aa0.63□□□□□ -2.31
SNX6-204ENST00000555541 PPIL1Q9Y3C6 166 aa0.63□□□□□ -2.31
SNX6-204ENST00000555541 ENPP4Q9Y6X5 453 aa0.63□□□□□ -2.31
SNX6-204ENST00000555541 MDC1Q14676 2089 aaKnown RBP0.63□□□□□ -2.31
SNX6-204ENST00000555541 ADAMTS7Q9UKP4 1686 aa0.62□□□□□ -2.31
SNX6-204ENST00000555541 ZNF860A6NHJ4 632 aa0.62□□□□□ -2.31
SNX6-204ENST00000555541 LSM1O15116 133 aaKnown RBP0.62□□□□□ -2.31
SNX6-204ENST00000555541 CTAG2O75638 210 aa0.62□□□□□ -2.31
SNX6-204ENST00000555541 OR2F2O95006 317 aa0.62□□□□□ -2.31
SNX6-204ENST00000555541 IGKV1D-33P01593 117 aa0.62□□□□□ -2.31
SNX6-204ENST00000555541 IGKV1-33P01594 117 aa0.62□□□□□ -2.31
SNX6-204ENST00000555541 FBXL19-AS1Q494R0 122 aa0.62□□□□□ -2.31
SNX6-204ENST00000555541 N4BP2L1Q5TBK1 243 aaPredicted RBP0.62□□□□□ -2.31
SNX6-204ENST00000555541 PRAMEF20Q5VT98 475 aa0.62□□□□□ -2.31
SNX6-204ENST00000555541 CLEC18BQ6UXF7 455 aa0.62□□□□□ -2.31
SNX6-204ENST00000555541 TCF23Q7RTU1 214 aa0.62□□□□□ -2.31
SNX6-204ENST00000555541 SLC30A8Q8IWU4 369 aa0.62□□□□□ -2.31
SNX6-204ENST00000555541 MSRB3Q8IXL7 192 aa0.62□□□□□ -2.31
SNX6-204ENST00000555541 ZCCHC24Q8N2G6 241 aaKnown RBP0.62□□□□□ -2.31
SNX6-204ENST00000555541 OR5H2Q8NGV7 314 aa0.62□□□□□ -2.31
SNX6-204ENST00000555541 OR8S1Q8NH09 359 aa0.62□□□□□ -2.31
SNX6-204ENST00000555541 THTPAQ9BU02 230 aa0.62□□□□□ -2.31
SNX6-204ENST00000555541 KIR3DX1Q9H7L2 352 aa0.62□□□□□ -2.31
SNX6-204ENST00000555541 LYARQ9NX58 379 aaKnown RBP0.62□□□□□ -2.31
SNX6-204ENST00000555541 C9JQL5 133 aa0.61□□□□□ -2.31
SNX6-204ENST00000555541 CDK1P06493 297 aa0.61□□□□□ -2.31
SNX6-204ENST00000555541 OR4Q2P0C623 313 aa0.61□□□□□ -2.31
SNX6-204ENST00000555541 ZNF22P17026 224 aaPredicted RBP0.61□□□□□ -2.31
SNX6-204ENST00000555541 HOXB8P17481 243 aaPredicted RBP0.61□□□□□ -2.31
SNX6-204ENST00000555541 HLA-GP17693 338 aa0.61□□□□□ -2.31
SNX6-204ENST00000555541 NBL1P41271 181 aa0.61□□□□□ -2.31
SNX6-204ENST00000555541 SLC1A2P43004 574 aa0.61□□□□□ -2.31
SNX6-204ENST00000555541 UBE2MP61081 183 aaKnown RBP0.61□□□□□ -2.31
SNX6-204ENST00000555541 CYHR1Q6ZMK1 362 aa0.61□□□□□ -2.31
SNX6-204ENST00000555541 ZNF767PQ75MW2 155 aa0.61□□□□□ -2.31
SNX6-204ENST00000555541 UNC93AQ86WB7 457 aa0.61□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms