RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 MAGEB3O15480 346 aa9.15□□□□□ -0.94
TDP1-211ENST00000555178 CTAG2O75638 210 aa9.15□□□□□ -0.94
TDP1-211ENST00000555178 IGHV3-13P01766 116 aa9.15□□□□□ -0.94
TDP1-211ENST00000555178 ERCC1P07992 297 aaPredicted RBP9.15□□□□□ -0.94
TDP1-211ENST00000555178 ELK1P19419 428 aa9.15□□□□□ -0.94
TDP1-211ENST00000555178 ZP1P60852 638 aa9.15□□□□□ -0.94
TDP1-211ENST00000555178 CEACAM21Q3KPI0 293 aa9.15□□□□□ -0.94
TDP1-211ENST00000555178 C1orf100Q5SVJ3 147 aa9.15□□□□□ -0.94
TDP1-211ENST00000555178 AWAT2Q6E213 333 aa9.15□□□□□ -0.94
TDP1-211ENST00000555178 SSX8Q7RTT4 187 aa9.15□□□□□ -0.94
TDP1-211ENST00000555178 FTMTQ8N4E7 242 aa9.15□□□□□ -0.94
TDP1-211ENST00000555178 OR8G5Q8NG78 346 aa9.15□□□□□ -0.94
TDP1-211ENST00000555178 OR6M1Q8NGM8 313 aa9.15□□□□□ -0.94
TDP1-211ENST00000555178 SPSB1Q96BD6 273 aa9.15□□□□□ -0.94
TDP1-211ENST00000555178 FAM3DQ96BQ1 224 aa9.15□□□□□ -0.94
TDP1-211ENST00000555178 SORCS2Q96PQ0 1159 aa9.15□□□□□ -0.94
TDP1-211ENST00000555178 CMAHPQ9Y471 501 aa9.15□□□□□ -0.94
TDP1-211ENST00000555178 LOC100289279A0A1B0GTE1 492 aa9.15□□□□□ -0.95
TDP1-211ENST00000555178 TMEM272A0A1B0GTI8 110 aa9.15□□□□□ -0.95
TDP1-211ENST00000555178 PQLC2LA1A4F0 135 aa9.15□□□□□ -0.95
TDP1-211ENST00000555178 ALX3O95076 343 aa9.15□□□□□ -0.95
TDP1-211ENST00000555178 ALDOBP05062 364 aa9.15□□□□□ -0.95
TDP1-211ENST00000555178 CALCBP10092 127 aa9.15□□□□□ -0.95
TDP1-211ENST00000555178 CFPP27918 469 aa9.15□□□□□ -0.95
TDP1-211ENST00000555178 TNFSF8P32971 234 aa9.15□□□□□ -0.95
TDP1-211ENST00000555178 RBP2P50120 134 aa9.15□□□□□ -0.95
TDP1-211ENST00000555178 C2orf76Q3KRA6 126 aa9.15□□□□□ -0.95
TDP1-211ENST00000555178 GLIPR1L1Q6UWM5 242 aa9.15□□□□□ -0.95
TDP1-211ENST00000555178 KRT74Q7RTS7 529 aa9.15□□□□□ -0.95
TDP1-211ENST00000555178 RTN4RL2Q86UN3 420 aa9.15□□□□□ -0.95
TDP1-211ENST00000555178 TMEM104Q8NE00 496 aa9.15□□□□□ -0.95
TDP1-211ENST00000555178 TNFAIP8L1Q8WVP5 186 aa9.15□□□□□ -0.95
TDP1-211ENST00000555178 RNF170Q96K19 258 aa9.15□□□□□ -0.95
TDP1-211ENST00000555178 ZNF442Q9H7R0 627 aa9.15□□□□□ -0.95
TDP1-211ENST00000555178 UBTD1Q9HAC8 227 aa9.15□□□□□ -0.95
TDP1-211ENST00000555178 MRPS28Q9Y2Q9 187 aaKnown RBP9.15□□□□□ -0.95
TDP1-211ENST00000555178 A3GALT2U3KPV4 340 aa9.15□□□□□ -0.95
TDP1-211ENST00000555178 ANKRD17O75179 2603 aaKnown RBP9.14□□□□□ -0.95
TDP1-211ENST00000555178 UNC79Q9P2D8 2635 aa9.14□□□□□ -0.95
TDP1-211ENST00000555178 PDZD2O15018 2839 aa9.14□□□□□ -0.95
TDP1-211ENST00000555178 IGKV1-12A0A0C4DH73 117 aa9.14□□□□□ -0.95
TDP1-211ENST00000555178 IGKV1D-12P01611 117 aa9.14□□□□□ -0.95
TDP1-211ENST00000555178 INHBBP09529 407 aa9.14□□□□□ -0.95
TDP1-211ENST00000555178 ARSBP15848 533 aa9.14□□□□□ -0.95
TDP1-211ENST00000555178 SERPINF1P36955 418 aa9.14□□□□□ -0.95
TDP1-211ENST00000555178 HAAOP46952 286 aa9.14□□□□□ -0.95
TDP1-211ENST00000555178 FUT6P51993 359 aa9.14□□□□□ -0.95
TDP1-211ENST00000555178 RPS23P62266 143 aaKnown RBP9.14□□□□□ -0.95
TDP1-211ENST00000555178 UNC119Q13432 240 aa9.14□□□□□ -0.95
TDP1-211ENST00000555178 OR8G1Q15617 311 aa9.14□□□□□ -0.95
TDP1-211ENST00000555178 CROCCP3Q8IVE0 287 aa9.14□□□□□ -0.95
TDP1-211ENST00000555178 IZUMO1Q8IYV9 350 aa9.14□□□□□ -0.95
TDP1-211ENST00000555178 MFSD4AQ8N468 514 aa9.14□□□□□ -0.95
TDP1-211ENST00000555178 OR8S1Q8NH09 359 aa9.14□□□□□ -0.95
TDP1-211ENST00000555178 UQCC2Q9BRT2 126 aa9.14□□□□□ -0.95
TDP1-211ENST00000555178 PLK3Q9H4B4 646 aa9.14□□□□□ -0.95
TDP1-211ENST00000555178 AKIP1Q9NQ31 210 aa9.14□□□□□ -0.95
TDP1-211ENST00000555178 TMEM100Q9NV29 134 aa9.14□□□□□ -0.95
TDP1-211ENST00000555178 SLC7A11Q9UPY5 501 aa9.14□□□□□ -0.95
TDP1-211ENST00000555178 MPC1Q9Y5U8 109 aa9.14□□□□□ -0.95
TDP1-211ENST00000555178 SPRY3O43610 288 aa9.13□□□□□ -0.95
TDP1-211ENST00000555178 SYNGR1O43759 233 aa9.13□□□□□ -0.95
TDP1-211ENST00000555178 LY6HO94772 140 aa9.13□□□□□ -0.95
TDP1-211ENST00000555178 DANCRP0C864 163 aa9.13□□□□□ -0.95
TDP1-211ENST00000555178 VSIG8P0DPA2 414 aa9.13□□□□□ -0.95
TDP1-211ENST00000555178 COX6B1P14854 86 aa9.13□□□□□ -0.95
TDP1-211ENST00000555178 PRKACBP22694 351 aa9.13□□□□□ -0.95
TDP1-211ENST00000555178 PTGFRP43088 359 aa9.13□□□□□ -0.95
TDP1-211ENST00000555178 PSMD7P51665 324 aa9.13□□□□□ -0.95
TDP1-211ENST00000555178 MAB21L1Q13394 359 aa9.13□□□□□ -0.95
TDP1-211ENST00000555178 SWI5Q1ZZU3 235 aa9.13□□□□□ -0.95
TDP1-211ENST00000555178 SLC22A6Q4U2R8 563 aa9.13□□□□□ -0.95
TDP1-211ENST00000555178 PRAMEF6Q5VXH4 476 aa9.13□□□□□ -0.95
TDP1-211ENST00000555178 CNIH2Q6PI25 160 aa9.13□□□□□ -0.95
TDP1-211ENST00000555178 LHFPL2Q6ZUX7 228 aa9.13□□□□□ -0.95
TDP1-211ENST00000555178 OR2Z1Q8NG97 314 aa9.13□□□□□ -0.95
TDP1-211ENST00000555178 KCTD12Q96CX2 325 aaKnown RBP9.13□□□□□ -0.95
TDP1-211ENST00000555178 ZNF488Q96MN9 340 aa9.13□□□□□ -0.95
TDP1-211ENST00000555178 BANF2Q9H503 90 aa9.13□□□□□ -0.95
TDP1-211ENST00000555178 PLEKHF2Q9H8W4 249 aa9.13□□□□□ -0.95
TDP1-211ENST00000555178 NEK6Q9HC98 313 aa9.13□□□□□ -0.95
TDP1-211ENST00000555178 TREM2Q9NZC2 230 aa9.13□□□□□ -0.95
TDP1-211ENST00000555178 ABRACLQ9P1F3 81 aa9.13□□□□□ -0.95
TDP1-211ENST00000555178 SPATA2Q9UM82 520 aa9.13□□□□□ -0.95
TDP1-211ENST00000555178 PEX16Q9Y5Y5 336 aa9.13□□□□□ -0.95
TDP1-211ENST00000555178 TANC2Q9HCD6 1990 aa9.13□□□□□ -0.95
TDP1-211ENST00000555178 F8VVB4 439 aa9.13□□□□□ -0.95
TDP1-211ENST00000555178 F8VWA3 439 aa9.13□□□□□ -0.95
TDP1-211ENST00000555178 J3QRK9 145 aa9.13□□□□□ -0.95
TDP1-211ENST00000555178 HS3ST1O14792 307 aa9.13□□□□□ -0.95
TDP1-211ENST00000555178 RHBDL1O75783 438 aa9.13□□□□□ -0.95
TDP1-211ENST00000555178 KDM4BO94953 1096 aa9.13□□□□□ -0.95
TDP1-211ENST00000555178 TMEM225BP0DP42 221 aa9.13□□□□□ -0.95
TDP1-211ENST00000555178 TUBG1P23258 451 aa9.13□□□□□ -0.95
TDP1-211ENST00000555178 APOBEC3AP31941 199 aaPredicted RBP9.13□□□□□ -0.95
TDP1-211ENST00000555178 S100A5P33763 92 aa9.13□□□□□ -0.95
TDP1-211ENST00000555178 PEX19P40855 299 aa9.13□□□□□ -0.95
TDP1-211ENST00000555178 QRFPP83859 136 aa9.13□□□□□ -0.95
TDP1-211ENST00000555178 MPPED2Q15777 294 aa9.13□□□□□ -0.95
TDP1-211ENST00000555178 NKPD1Q17RQ9 610 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms