RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 PPWD1Q96BP3 646 aaKnown RBP3.75□□□□□ -1.81
VRK1-203ENST00000555067 DNAJC19Q96DA6 116 aa3.75□□□□□ -1.81
VRK1-203ENST00000555067 GALNT14Q96FL9 552 aa3.75□□□□□ -1.81
VRK1-203ENST00000555067 PPP1R36Q96LQ0 422 aa3.75□□□□□ -1.81
VRK1-203ENST00000555067 Q96MT0 163 aa3.75□□□□□ -1.81
VRK1-203ENST00000555067 TOLLIPQ9H0E2 274 aa3.75□□□□□ -1.81
VRK1-203ENST00000555067 METTL17Q9H7H0 456 aaPredicted RBP3.75□□□□□ -1.81
VRK1-203ENST00000555067 TRIM45Q9H8W5 580 aaPredicted RBP3.75□□□□□ -1.81
VRK1-203ENST00000555067 FGFR1OP2Q9NVK5 253 aa3.75□□□□□ -1.81
VRK1-203ENST00000555067 BABAM2Q9NXR7 383 aa3.75□□□□□ -1.81
VRK1-203ENST00000555067 CLEC4EQ9ULY5 219 aa3.75□□□□□ -1.81
VRK1-203ENST00000555067 NDRG2Q9UN36 371 aaKnown RBP3.75□□□□□ -1.81
VRK1-203ENST00000555067 PRELID1Q9Y255 219 aa3.75□□□□□ -1.81
VRK1-203ENST00000555067 NEUROG3Q9Y4Z2 214 aa3.75□□□□□ -1.81
VRK1-203ENST00000555067 HEBP2Q9Y5Z4 205 aa3.75□□□□□ -1.81
VRK1-203ENST00000555067 ZNF608Q9ULD9 1512 aaPredicted RBP3.75□□□□□ -1.81
VRK1-203ENST00000555067 CHD4Q14839 1912 aa3.74□□□□□ -1.81
VRK1-203ENST00000555067 SMIM26A0A096LP01 95 aa3.74□□□□□ -1.81
VRK1-203ENST00000555067 MAGEB4O15481 346 aaPredicted RBP3.74□□□□□ -1.81
VRK1-203ENST00000555067 TGOLN2O43493 480 aa3.74□□□□□ -1.81
VRK1-203ENST00000555067 KLF8O95600 359 aaPredicted RBP3.74□□□□□ -1.81
VRK1-203ENST00000555067 SLC25A27O95847 323 aa3.74□□□□□ -1.81
VRK1-203ENST00000555067 IGKV5-2P06315 115 aa3.74□□□□□ -1.81
VRK1-203ENST00000555067 TDGF1P13385 188 aa3.74□□□□□ -1.81
VRK1-203ENST00000555067 UGT2B7P16662 529 aa3.74□□□□□ -1.81
VRK1-203ENST00000555067 HTR1DP28221 377 aa3.74□□□□□ -1.81
VRK1-203ENST00000555067 TDGF1P3P51864 188 aa3.74□□□□□ -1.81
VRK1-203ENST00000555067 NUP107P57740 925 aa3.74□□□□□ -1.81
VRK1-203ENST00000555067 TAS2R46P59540 309 aa3.74□□□□□ -1.81
VRK1-203ENST00000555067 VBP1P61758 197 aa3.74□□□□□ -1.81
VRK1-203ENST00000555067 NSDHLQ15738 373 aa3.74□□□□□ -1.81
VRK1-203ENST00000555067 DNAL1Q4LDG9 190 aa3.74□□□□□ -1.81
VRK1-203ENST00000555067 COA6Q5JTJ3 125 aaKnown RBP3.74□□□□□ -1.81
VRK1-203ENST00000555067 POGZQ7Z3K3 1410 aa3.74□□□□□ -1.81
VRK1-203ENST00000555067 CCDC112Q8NEF3 446 aa3.74□□□□□ -1.81
VRK1-203ENST00000555067 UCN3Q969E3 161 aa3.74□□□□□ -1.81
VRK1-203ENST00000555067 OTUB2Q96DC9 234 aa3.74□□□□□ -1.81
VRK1-203ENST00000555067 SMIM19Q96E16 107 aa3.74□□□□□ -1.81
VRK1-203ENST00000555067 SEH1LQ96EE3 360 aa3.74□□□□□ -1.81
VRK1-203ENST00000555067 PGLYRP3Q96LB9 341 aa3.74□□□□□ -1.81
VRK1-203ENST00000555067 ARL6Q9H0F7 186 aa3.74□□□□□ -1.81
VRK1-203ENST00000555067 TMEM131Q92545 1883 aa3.73□□□□□ -1.81
VRK1-203ENST00000555067 IGKV1-8A0A0C4DH67 115 aa3.73□□□□□ -1.81
VRK1-203ENST00000555067 A0A1W2PQL4 384 aaPredicted RBP3.73□□□□□ -1.81
VRK1-203ENST00000555067 A0A1W2PRG6 482 aa3.73□□□□□ -1.81
VRK1-203ENST00000555067 PEX7O00628 323 aa3.73□□□□□ -1.81
VRK1-203ENST00000555067 FAM189A1O60320 539 aa3.73□□□□□ -1.81
VRK1-203ENST00000555067 GLSO94925 669 aaPredicted RBP3.73□□□□□ -1.81
VRK1-203ENST00000555067 SEMA3DO95025 777 aa3.73□□□□□ -1.81
VRK1-203ENST00000555067 FABP3P05413 133 aa3.73□□□□□ -1.81
VRK1-203ENST00000555067 MMP7P09237 267 aaPredicted RBP3.73□□□□□ -1.81
VRK1-203ENST00000555067 ZNF30P17039 623 aa3.73□□□□□ -1.81
VRK1-203ENST00000555067 RAB3AP20336 220 aa3.73□□□□□ -1.81
VRK1-203ENST00000555067 SLC7A9P82251 487 aa3.73□□□□□ -1.81
VRK1-203ENST00000555067 CDC20Q12834 499 aa3.73□□□□□ -1.81
VRK1-203ENST00000555067 SHHQ15465 462 aa3.73□□□□□ -1.81
VRK1-203ENST00000555067 TOMM34Q15785 309 aaPredicted RBP3.73□□□□□ -1.81
VRK1-203ENST00000555067 CEACAM16Q2WEN9 425 aa3.73□□□□□ -1.81
VRK1-203ENST00000555067 TTC32Q5I0X7 151 aa3.73□□□□□ -1.81
VRK1-203ENST00000555067 METTL21CQ5VZV1 264 aa3.73□□□□□ -1.81
VRK1-203ENST00000555067 FBXW9Q5XUX1 488 aa3.73□□□□□ -1.81
VRK1-203ENST00000555067 KDM4DQ6B0I6 523 aa3.73□□□□□ -1.81
VRK1-203ENST00000555067 LGI3Q8N145 548 aa3.73□□□□□ -1.81
VRK1-203ENST00000555067 RIBC1Q8N443 379 aaPredicted RBP3.73□□□□□ -1.81
VRK1-203ENST00000555067 COX18Q8N8Q8 333 aa3.73□□□□□ -1.81
VRK1-203ENST00000555067 OR6N1Q8NGY5 312 aa3.73□□□□□ -1.81
VRK1-203ENST00000555067 FAM45AQ8TCE6 357 aa3.73□□□□□ -1.81
VRK1-203ENST00000555067 BLOC1S5Q8TDH9 187 aa3.73□□□□□ -1.81
VRK1-203ENST00000555067 DDIT4LQ96D03 193 aa3.73□□□□□ -1.81
VRK1-203ENST00000555067 CCDC42Q96M95 316 aa3.73□□□□□ -1.81
VRK1-203ENST00000555067 KCTD7Q96MP8 289 aa3.73□□□□□ -1.81
VRK1-203ENST00000555067 TEAD3Q99594 435 aa3.73□□□□□ -1.81
VRK1-203ENST00000555067 NUDT9Q9BW91 350 aa3.73□□□□□ -1.81
VRK1-203ENST00000555067 LHX5Q9H2C1 402 aa3.73□□□□□ -1.81
VRK1-203ENST00000555067 EXOSC4Q9NPD3 245 aaKnown RBP3.73□□□□□ -1.81
VRK1-203ENST00000555067 TNFRSF19Q9NS68 423 aa3.73□□□□□ -1.81
VRK1-203ENST00000555067 RBFOX1Q9NWB1 397 aaKnown RBP3.73□□□□□ -1.81
VRK1-203ENST00000555067 GUCA1BQ9UMX6 200 aa3.73□□□□□ -1.81
VRK1-203ENST00000555067 PSG8Q9UQ74 426 aa3.73□□□□□ -1.81
VRK1-203ENST00000555067 RAB3GAP2Q9H2M9 1393 aa3.73□□□□□ -1.81
VRK1-203ENST00000555067 C2orf16Q68DN1 1984 aa3.72□□□□□ -1.81
VRK1-203ENST00000555067 NFASCO94856 1347 aa3.72□□□□□ -1.81
VRK1-203ENST00000555067 TINCRA0A1B0GVN0 87 aa3.72□□□□□ -1.81
VRK1-203ENST00000555067 C21orf140B9A014 251 aa3.72□□□□□ -1.81
VRK1-203ENST00000555067 UBDO15205 165 aa3.72□□□□□ -1.81
VRK1-203ENST00000555067 RAD1O60671 282 aa3.72□□□□□ -1.81
VRK1-203ENST00000555067 RP2O75695 350 aa3.72□□□□□ -1.81
VRK1-203ENST00000555067 CTDNEP1O95476 244 aa3.72□□□□□ -1.81
VRK1-203ENST00000555067 MOSP00540 346 aa3.72□□□□□ -1.81
VRK1-203ENST00000555067 APOEP02649 317 aa3.72□□□□□ -1.81
VRK1-203ENST00000555067 BGLAPP02818 100 aa3.72□□□□□ -1.81
VRK1-203ENST00000555067 RLN2P04090 185 aa3.72□□□□□ -1.81
VRK1-203ENST00000555067 C8orf88P0DMB2 117 aa3.72□□□□□ -1.81
VRK1-203ENST00000555067 SLC2A1P11166 492 aa3.72□□□□□ -1.81
VRK1-203ENST00000555067 CELP19835 753 aa3.72□□□□□ -1.81
VRK1-203ENST00000555067 F8A1P23610 371 aa3.72□□□□□ -1.81
VRK1-203ENST00000555067 HSD11B1P28845 292 aa3.72□□□□□ -1.81
VRK1-203ENST00000555067 IDH2P48735 452 aaKnown RBP3.72□□□□□ -1.81
VRK1-203ENST00000555067 GDI2P50395 445 aaKnown RBP3.72□□□□□ -1.81
VRK1-203ENST00000555067 P2RY4P51582 365 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms