RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 SNCBQ16143 134 aa10.3□□□□□ -0.76
SYNE2-214ENST00000554928 HAGHLQ6PII5 290 aaPredicted RBP10.3□□□□□ -0.76
SYNE2-214ENST00000554928 ZNF841Q6ZN19 808 aa10.3□□□□□ -0.76
SYNE2-214ENST00000554928 AHSA2Q719I0 299 aa10.3□□□□□ -0.76
SYNE2-214ENST00000554928 ANGPTL5Q86XS5 388 aa10.3□□□□□ -0.76
SYNE2-214ENST00000554928 MUC20Q8N307 709 aaPredicted RBP10.3□□□□□ -0.76
SYNE2-214ENST00000554928 ZNF485Q8NCK3 441 aa10.3□□□□□ -0.76
SYNE2-214ENST00000554928 OR5T2Q8NGG2 359 aa10.3□□□□□ -0.76
SYNE2-214ENST00000554928 OR5A2Q8NGI9 324 aa10.3□□□□□ -0.76
SYNE2-214ENST00000554928 TMPRSS13Q9BYE2 586 aa10.3□□□□□ -0.76
SYNE2-214ENST00000554928 VCXQ9H320 206 aa10.3□□□□□ -0.76
SYNE2-214ENST00000554928 SMURF1Q9HCE7 757 aa10.3□□□□□ -0.76
SYNE2-214ENST00000554928 FKBP14Q9NWM8 211 aa10.3□□□□□ -0.76
SYNE2-214ENST00000554928 PAK1IP1Q9NWT1 392 aaPredicted RBP10.3□□□□□ -0.76
SYNE2-214ENST00000554928 TMEM160Q9NX00 188 aa10.3□□□□□ -0.76
SYNE2-214ENST00000554928 IGKV1-9A0A0C4DH69 117 aa10.29□□□□□ -0.76
SYNE2-214ENST00000554928 ANKRD61A6NGH8 418 aa10.29□□□□□ -0.76
SYNE2-214ENST00000554928 SRRM5B3KS81 715 aa10.29□□□□□ -0.76
SYNE2-214ENST00000554928 H0YJX3 145 aa10.29□□□□□ -0.76
SYNE2-214ENST00000554928 FSTL3O95633 263 aa10.29□□□□□ -0.76
SYNE2-214ENST00000554928 CFHR2P36980 270 aa10.29□□□□□ -0.76
SYNE2-214ENST00000554928 CCR9P51686 369 aa10.29□□□□□ -0.76
SYNE2-214ENST00000554928 PAX2Q02962 417 aa10.29□□□□□ -0.76
SYNE2-214ENST00000554928 RIPK1Q13546 671 aa10.29□□□□□ -0.76
SYNE2-214ENST00000554928 C6orf141Q5SZD1 244 aa10.29□□□□□ -0.76
SYNE2-214ENST00000554928 TMEM244Q5VVB8 128 aa10.29□□□□□ -0.76
SYNE2-214ENST00000554928 TEX36Q5VZQ5 186 aa10.29□□□□□ -0.76
SYNE2-214ENST00000554928 FAHD2BQ6P2I3 314 aaPredicted RBP10.29□□□□□ -0.76
SYNE2-214ENST00000554928 DCDC5Q6ZRR9 648 aa10.29□□□□□ -0.76
SYNE2-214ENST00000554928 CALHM1Q8IU99 346 aa10.29□□□□□ -0.76
SYNE2-214ENST00000554928 ZFP41Q8N8Y5 198 aa10.29□□□□□ -0.76
SYNE2-214ENST00000554928 GATAD2BQ8WXI9 593 aa10.29□□□□□ -0.76
SYNE2-214ENST00000554928 AQP3Q92482 292 aa10.29□□□□□ -0.76
SYNE2-214ENST00000554928 FGGYQ96C11 551 aa10.29□□□□□ -0.76
SYNE2-214ENST00000554928 NEIL1Q96FI4 390 aaPredicted RBP10.29□□□□□ -0.76
SYNE2-214ENST00000554928 FAHD2AQ96GK7 314 aa10.29□□□□□ -0.76
SYNE2-214ENST00000554928 TMEM80Q96HE8 168 aa10.29□□□□□ -0.76
SYNE2-214ENST00000554928 HIST1H2AAQ96QV6 131 aa10.29□□□□□ -0.76
SYNE2-214ENST00000554928 CCL13Q99616 98 aa10.29□□□□□ -0.76
SYNE2-214ENST00000554928 ABCB9Q9NP78 766 aa10.29□□□□□ -0.76
SYNE2-214ENST00000554928 PLCXD1Q9NUJ7 323 aa10.29□□□□□ -0.76
SYNE2-214ENST00000554928 OPN4Q9UHM6 478 aa10.29□□□□□ -0.76
SYNE2-214ENST00000554928 TRAV20A0A0B4J274 112 aa10.28□□□□□ -0.76
SYNE2-214ENST00000554928 FAM230AA0A1W2PPH8 454 aa10.28□□□□□ -0.76
SYNE2-214ENST00000554928 OR5B21A6NL26 309 aa10.28□□□□□ -0.76
SYNE2-214ENST00000554928 DHRS7CA6NNS2 312 aa10.28□□□□□ -0.76
SYNE2-214ENST00000554928 A8MXK9 166 aa10.28□□□□□ -0.76
SYNE2-214ENST00000554928 C22orf46C9J442 243 aa10.28□□□□□ -0.76
SYNE2-214ENST00000554928 ADAM20O43506 726 aa10.28□□□□□ -0.76
SYNE2-214ENST00000554928 ISG15P05161 165 aa10.28□□□□□ -0.76
SYNE2-214ENST00000554928 PIPP12273 146 aaPredicted RBP10.28□□□□□ -0.76
SYNE2-214ENST00000554928 ADRA2CP18825 462 aa10.28□□□□□ -0.76
SYNE2-214ENST00000554928 PITPNBP48739 271 aa10.28□□□□□ -0.76
SYNE2-214ENST00000554928 GBX2P52951 348 aaPredicted RBP10.28□□□□□ -0.76
SYNE2-214ENST00000554928 CDK5R1Q15078 307 aa10.28□□□□□ -0.76
SYNE2-214ENST00000554928 CHRFAM7AQ494W8 412 aa10.28□□□□□ -0.76
SYNE2-214ENST00000554928 WDR25Q64LD2 544 aaPredicted RBP10.28□□□□□ -0.76
SYNE2-214ENST00000554928 ASPHD2Q6ICH7 369 aa10.28□□□□□ -0.76
SYNE2-214ENST00000554928 FAM216BQ8N7L0 139 aa10.28□□□□□ -0.76
SYNE2-214ENST00000554928 ZNF676Q8N7Q3 588 aa10.28□□□□□ -0.76
SYNE2-214ENST00000554928 OR13C5Q8NGS8 318 aa10.28□□□□□ -0.76
SYNE2-214ENST00000554928 OR10Z1Q8NGY1 313 aa10.28□□□□□ -0.76
SYNE2-214ENST00000554928 RPS4Y2Q8TD47 263 aa10.28□□□□□ -0.76
SYNE2-214ENST00000554928 DACT3Q96B18 629 aaPredicted RBP10.28□□□□□ -0.76
SYNE2-214ENST00000554928 SSBP3Q9BWW4 388 aaPredicted RBP10.28□□□□□ -0.76
SYNE2-214ENST00000554928 BEX2Q9BXY8 128 aa10.28□□□□□ -0.76
SYNE2-214ENST00000554928 CHST5Q9GZS9 411 aa10.28□□□□□ -0.76
SYNE2-214ENST00000554928 SHARPINQ9H0F6 387 aa10.28□□□□□ -0.76
SYNE2-214ENST00000554928 PLEKHA1Q9HB21 404 aa10.28□□□□□ -0.76
SYNE2-214ENST00000554928 MIOXQ9UGB7 285 aa10.28□□□□□ -0.76
SYNE2-214ENST00000554928 CAB39Q9Y376 341 aaPredicted RBP10.28□□□□□ -0.76
SYNE2-214ENST00000554928 EXOSC1Q9Y3B2 195 aaKnown RBP10.28□□□□□ -0.76
SYNE2-214ENST00000554928 JMJD1CQ15652 2540 aa10.28□□□□□ -0.76
SYNE2-214ENST00000554928 DNHD1Q96M86 4753 aa10.27□□□□□ -0.76
SYNE2-214ENST00000554928 LOC105371242A0A075B767 164 aa10.27□□□□□ -0.77
SYNE2-214ENST00000554928 TRAV38-1A0A0B4J264 116 aa10.27□□□□□ -0.77
SYNE2-214ENST00000554928 EFCAB10A6NFE3 127 aa10.27□□□□□ -0.77
SYNE2-214ENST00000554928 F8VVB4 439 aa10.27□□□□□ -0.77
SYNE2-214ENST00000554928 F8VWA3 439 aa10.27□□□□□ -0.77
SYNE2-214ENST00000554928 J3QT63 122 aa10.27□□□□□ -0.77
SYNE2-214ENST00000554928 SLC1A7O00341 560 aa10.27□□□□□ -0.77
SYNE2-214ENST00000554928 FOXH1O75593 365 aa10.27□□□□□ -0.77
SYNE2-214ENST00000554928 INMTO95050 263 aa10.27□□□□□ -0.77
SYNE2-214ENST00000554928 PLATP00750 562 aa10.27□□□□□ -0.77
SYNE2-214ENST00000554928 MYF6P23409 242 aa10.27□□□□□ -0.77
SYNE2-214ENST00000554928 HAAOP46952 286 aa10.27□□□□□ -0.77
SYNE2-214ENST00000554928 TGM4P49221 684 aa10.27□□□□□ -0.77
SYNE2-214ENST00000554928 SRSF2Q01130 221 aaKnown RBP10.27□□□□□ -0.77
SYNE2-214ENST00000554928 ESCO2Q56NI9 601 aa10.27□□□□□ -0.77
SYNE2-214ENST00000554928 STUMQ69YW2 141 aa10.27□□□□□ -0.77
SYNE2-214ENST00000554928 CRIP3Q6Q6R5 217 aa10.27□□□□□ -0.77
SYNE2-214ENST00000554928 OR8B3Q8NGG8 313 aa10.27□□□□□ -0.77
SYNE2-214ENST00000554928 OR13C3Q8NGS6 347 aa10.27□□□□□ -0.77
SYNE2-214ENST00000554928 ITFG2Q969R8 447 aa10.27□□□□□ -0.77
SYNE2-214ENST00000554928 ORAI1Q96D31 301 aa10.27□□□□□ -0.77
SYNE2-214ENST00000554928 MRPL48Q96GC5 212 aaKnown RBP10.27□□□□□ -0.77
SYNE2-214ENST00000554928 SPACA5Q96QH8 159 aa10.27□□□□□ -0.77
SYNE2-214ENST00000554928 OR8B2Q96RD0 313 aa10.27□□□□□ -0.77
SYNE2-214ENST00000554928 ANKRD60Q9BZ19 345 aa10.27□□□□□ -0.77
SYNE2-214ENST00000554928 CNOT2Q9NZN8 540 aaKnown RBP10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms