RNA–Protein interactions for RNA: ENST00000554607.1

FOXA1-204, Transcript of forkhead box A1, humanhuman

TSL 3

Gene FOXA1, Length 789 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-204ENST00000554607 Q8N2B8 174 aa19.62■□□□□ 0.73
FOXA1-204ENST00000554607 OTOSQ8NHW6 89 aa19.62■□□□□ 0.73
FOXA1-204ENST00000554607 FAM81AQ8TBF8 368 aa19.62■□□□□ 0.73
FOXA1-204ENST00000554607 THEM6Q8WUY1 208 aa19.62■□□□□ 0.73
FOXA1-204ENST00000554607 LYZL4Q96KX0 146 aa19.62■□□□□ 0.73
FOXA1-204ENST00000554607 MMP28Q9H239 520 aa19.62■□□□□ 0.73
FOXA1-204ENST00000554607 NIPAL2Q9H841 368 aa19.62■□□□□ 0.73
FOXA1-204ENST00000554607 MED20Q9H944 212 aa19.62■□□□□ 0.73
FOXA1-204ENST00000554607 ZNF702PQ9H963 129 aa19.62■□□□□ 0.73
FOXA1-204ENST00000554607 SERTAD4Q9NUC0 356 aa19.62■□□□□ 0.73
FOXA1-204ENST00000554607 AURKAIP1Q9NWT8 199 aaPredicted RBP19.62■□□□□ 0.73
FOXA1-204ENST00000554607 FAM183AA6NL82 134 aa19.61■□□□□ 0.73
FOXA1-204ENST00000554607 VGLL3A8MV65 326 aa19.61■□□□□ 0.73
FOXA1-204ENST00000554607 CD28P10747 220 aa19.61■□□□□ 0.73
FOXA1-204ENST00000554607 FAHP16930 419 aa19.61■□□□□ 0.73
FOXA1-204ENST00000554607 PAX6P26367 422 aa19.61■□□□□ 0.73
FOXA1-204ENST00000554607 SPATS1Q496A3 300 aa19.61■□□□□ 0.73
FOXA1-204ENST00000554607 USE1Q9NZ43 259 aa19.61■□□□□ 0.73
FOXA1-204ENST00000554607 DNAH3Q8TD57 4116 aa19.61■□□□□ 0.73
FOXA1-204ENST00000554607 PEX14O75381 377 aa19.6■□□□□ 0.73
FOXA1-204ENST00000554607 MTRF1O75570 445 aaKnown RBP19.6■□□□□ 0.73
FOXA1-204ENST00000554607 ERVFRD-1P60508 538 aa19.6■□□□□ 0.73
FOXA1-204ENST00000554607 PSMA6P60900 246 aaKnown RBP19.6■□□□□ 0.73
FOXA1-204ENST00000554607 MICAQ29983 383 aa19.6■□□□□ 0.73
FOXA1-204ENST00000554607 TMEM200BQ69YZ2 307 aa19.6■□□□□ 0.73
FOXA1-204ENST00000554607 ZNF561Q8N587 486 aa19.6■□□□□ 0.73
FOXA1-204ENST00000554607 OR8B12Q8NGG6 310 aa19.6■□□□□ 0.73
FOXA1-204ENST00000554607 OR5A2Q8NGI9 324 aa19.6■□□□□ 0.73
FOXA1-204ENST00000554607 TEX47Q8TBZ9 253 aa19.6■□□□□ 0.73
FOXA1-204ENST00000554607 PHF21AQ96BD5 680 aa19.6■□□□□ 0.73
FOXA1-204ENST00000554607 ELAC2Q9BQ52 826 aaKnown RBP19.6■□□□□ 0.73
FOXA1-204ENST00000554607 OR51V1Q9H2C8 321 aa19.6■□□□□ 0.73
FOXA1-204ENST00000554607 MEGF11A6BM72 1044 aa19.59■□□□□ 0.73
FOXA1-204ENST00000554607 OR5B21A6NL26 309 aa19.59■□□□□ 0.73
FOXA1-204ENST00000554607 SLC1A7O00341 560 aa19.59■□□□□ 0.73
FOXA1-204ENST00000554607 COX7A1P24310 79 aa19.59■□□□□ 0.73
FOXA1-204ENST00000554607 MAGEA2P43356 314 aa19.59■□□□□ 0.73
FOXA1-204ENST00000554607 PPP1R8Q12972 351 aaKnown RBP19.59■□□□□ 0.73
FOXA1-204ENST00000554607 SMIM21Q3B7S5 101 aa19.59■□□□□ 0.73
FOXA1-204ENST00000554607 CEP78Q5JTW2 689 aa19.59■□□□□ 0.73
FOXA1-204ENST00000554607 C11orf42Q8N5U0 333 aa19.59■□□□□ 0.73
FOXA1-204ENST00000554607 AQP3Q92482 292 aa19.59■□□□□ 0.73
FOXA1-204ENST00000554607 PRSS22Q9GZN4 317 aa19.59■□□□□ 0.73
FOXA1-204ENST00000554607 ABCB10Q9NRK6 738 aa19.59■□□□□ 0.73
FOXA1-204ENST00000554607 PITPNC1Q9UKF7 332 aa19.59■□□□□ 0.73
FOXA1-204ENST00000554607 TCF19Q9Y242 345 aa19.59■□□□□ 0.73
FOXA1-204ENST00000554607 FAM90A8PA6NJQ4 464 aa19.58■□□□□ 0.72
FOXA1-204ENST00000554607 RFPL4AA6NLU0 287 aa19.58■□□□□ 0.72
FOXA1-204ENST00000554607 RFPL4AL1F8VTS6 287 aa19.58■□□□□ 0.72
FOXA1-204ENST00000554607 ATP6V1B1P15313 513 aa19.58■□□□□ 0.72
FOXA1-204ENST00000554607 HABP2Q14520 560 aaPredicted RBP19.58■□□□□ 0.72
FOXA1-204ENST00000554607 CNN3Q15417 329 aaKnown RBP19.58■□□□□ 0.72
FOXA1-204ENST00000554607 HAGHLQ6PII5 290 aaPredicted RBP19.58■□□□□ 0.72
FOXA1-204ENST00000554607 ACP7Q6ZNF0 438 aa19.58■□□□□ 0.72
FOXA1-204ENST00000554607 CALHM1Q8IU99 346 aa19.58■□□□□ 0.72
FOXA1-204ENST00000554607 OR2T27Q8NH04 317 aa19.58■□□□□ 0.72
FOXA1-204ENST00000554607 CITED2Q99967 270 aaPredicted RBP19.58■□□□□ 0.72
FOXA1-204ENST00000554607 REEP1Q9H902 201 aa19.58■□□□□ 0.72
FOXA1-204ENST00000554607 SAMHD1Q9Y3Z3 626 aaKnown RBP19.58■□□□□ 0.72
FOXA1-204ENST00000554607 ACOD1A6NK06 481 aa19.57■□□□□ 0.72
FOXA1-204ENST00000554607 PRDX2P32119 198 aa19.57■□□□□ 0.72
FOXA1-204ENST00000554607 HSP90B2PQ58FF3 399 aa19.57■□□□□ 0.72
FOXA1-204ENST00000554607 CD300LDQ6UXZ3 194 aa19.57■□□□□ 0.72
FOXA1-204ENST00000554607 CD177Q8N6Q3 437 aa19.57■□□□□ 0.72
FOXA1-204ENST00000554607 RPS4Y2Q8TD47 263 aa19.57■□□□□ 0.72
FOXA1-204ENST00000554607 FOXRED1Q96CU9 486 aaPredicted RBP19.57■□□□□ 0.72
FOXA1-204ENST00000554607 MALSU1Q96EH3 234 aa19.57■□□□□ 0.72
FOXA1-204ENST00000554607 C1orf21Q9H246 121 aa19.57■□□□□ 0.72
FOXA1-204ENST00000554607 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP19.57■□□□□ 0.72
FOXA1-204ENST00000554607 NDE1Q9NXR1 346 aa19.57■□□□□ 0.72
FOXA1-204ENST00000554607 U3KQV3 271 aa19.57■□□□□ 0.72
FOXA1-204ENST00000554607 NBEAL2Q6ZNJ1 2754 aa19.56■□□□□ 0.72
FOXA1-204ENST00000554607 A0A0U1RQV5 110 aa19.56■□□□□ 0.72
FOXA1-204ENST00000554607 PRR23D1E9PI22 279 aaPredicted RBP19.56■□□□□ 0.72
FOXA1-204ENST00000554607 H3BN98 237 aa19.56■□□□□ 0.72
FOXA1-204ENST00000554607 PRR23D2P0DMB1 279 aaPredicted RBP19.56■□□□□ 0.72
FOXA1-204ENST00000554607 RIPPLY1Q0D2K3 151 aa19.56■□□□□ 0.72
FOXA1-204ENST00000554607 VAX1Q5SQQ9 334 aa19.56■□□□□ 0.72
FOXA1-204ENST00000554607 FOXB2Q5VYV0 432 aa19.56■□□□□ 0.72
FOXA1-204ENST00000554607 C16orf89Q6UX73 402 aa19.56■□□□□ 0.72
FOXA1-204ENST00000554607 CYP2R1Q6VVX0 501 aa19.56■□□□□ 0.72
FOXA1-204ENST00000554607 MOB3CQ70IA8 216 aa19.56■□□□□ 0.72
FOXA1-204ENST00000554607 KRT77Q7Z794 578 aa19.56■□□□□ 0.72
FOXA1-204ENST00000554607 LHFPL4Q7Z7J7 247 aa19.56■□□□□ 0.72
FOXA1-204ENST00000554607 POC1AQ8NBT0 407 aa19.56■□□□□ 0.72
FOXA1-204ENST00000554607 OR4M1Q8NGD0 313 aa19.56■□□□□ 0.72
FOXA1-204ENST00000554607 WIPF2Q8TF74 440 aaPredicted RBP19.56■□□□□ 0.72
FOXA1-204ENST00000554607 MAGIXQ9H6Y5 334 aa19.56■□□□□ 0.72
FOXA1-204ENST00000554607 ACTR3BQ9P1U1 418 aa19.56■□□□□ 0.72
FOXA1-204ENST00000554607 TBL2Q9Y4P3 447 aaKnown RBP19.56■□□□□ 0.72
FOXA1-204ENST00000554607 A6NDX4 124 aa19.55■□□□□ 0.72
FOXA1-204ENST00000554607 ADARB2-AS1A8MUL3 147 aa19.55■□□□□ 0.72
FOXA1-204ENST00000554607 GSC2O15499 205 aa19.55■□□□□ 0.72
FOXA1-204ENST00000554607 SELENOFO60613 162 aa19.55■□□□□ 0.72
FOXA1-204ENST00000554607 CCL3L1P16619 93 aa19.55■□□□□ 0.72
FOXA1-204ENST00000554607 ZBTB37Q5TC79 503 aa19.55■□□□□ 0.72
FOXA1-204ENST00000554607 OR2T5Q6IEZ7 315 aa19.55■□□□□ 0.72
FOXA1-204ENST00000554607 IQCF1Q8N6M8 205 aa19.55■□□□□ 0.72
FOXA1-204ENST00000554607 OR2T29Q8NH02 315 aa19.55■□□□□ 0.72
FOXA1-204ENST00000554607 WNT10AQ9GZT5 417 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms