RNA–Protein interactions for RNA: ENST00000554514.1

ARHGEF40-203, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 2,928 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-203ENST00000554514 SGK3Q96BR1 496 aa13.71□□□□□ -0.21
ARHGEF40-203ENST00000554514 FAAP24Q9BTP7 215 aa13.71□□□□□ -0.21
ARHGEF40-203ENST00000554514 FAM117AQ9C073 453 aa13.71□□□□□ -0.21
ARHGEF40-203ENST00000554514 OSGIN2Q9Y236 505 aa13.71□□□□□ -0.21
ARHGEF40-203ENST00000554514 A0A087WZY1 265 aa13.71□□□□□ -0.21
ARHGEF40-203ENST00000554514 TRAPPC6AO75865 159 aa13.71□□□□□ -0.21
ARHGEF40-203ENST00000554514 LCATP04180 440 aa13.71□□□□□ -0.21
ARHGEF40-203ENST00000554514 GLI4P10075 376 aa13.71□□□□□ -0.21
ARHGEF40-203ENST00000554514 TAS2R46P59540 309 aa13.71□□□□□ -0.21
ARHGEF40-203ENST00000554514 CYCSP99999 105 aaKnown RBP13.71□□□□□ -0.21
ARHGEF40-203ENST00000554514 C10orf128Q5T292 105 aa13.71□□□□□ -0.21
ARHGEF40-203ENST00000554514 ZIC4Q8N9L1 334 aa13.71□□□□□ -0.21
ARHGEF40-203ENST00000554514 AGBL5Q8NDL9 886 aa13.71□□□□□ -0.21
ARHGEF40-203ENST00000554514 HAS2Q92819 552 aa13.71□□□□□ -0.21
ARHGEF40-203ENST00000554514 TOMM40LQ969M1 308 aa13.71□□□□□ -0.21
ARHGEF40-203ENST00000554514 PHYHIPLQ96FC7 376 aa13.71□□□□□ -0.21
ARHGEF40-203ENST00000554514 WDR54Q9H977 334 aa13.71□□□□□ -0.21
ARHGEF40-203ENST00000554514 NXT1Q9UKK6 140 aaKnown RBP13.71□□□□□ -0.21
ARHGEF40-203ENST00000554514 ANAPC10Q9UM13 185 aa13.71□□□□□ -0.21
ARHGEF40-203ENST00000554514 V9GYS6 101 aa13.71□□□□□ -0.21
ARHGEF40-203ENST00000554514 LOC102725191A0A1B0GVB3 256 aa13.7□□□□□ -0.22
ARHGEF40-203ENST00000554514 GPR31O00270 319 aa13.7□□□□□ -0.22
ARHGEF40-203ENST00000554514 CSTBP04080 98 aaKnown RBP13.7□□□□□ -0.22
ARHGEF40-203ENST00000554514 CPT2P23786 658 aa13.7□□□□□ -0.22
ARHGEF40-203ENST00000554514 NTF4P34130 210 aa13.7□□□□□ -0.22
ARHGEF40-203ENST00000554514 CBX5P45973 191 aa13.7□□□□□ -0.22
ARHGEF40-203ENST00000554514 SRSF3P84103 164 aaKnown RBP13.7□□□□□ -0.22
ARHGEF40-203ENST00000554514 IL11RAQ14626 422 aa13.7□□□□□ -0.22
ARHGEF40-203ENST00000554514 BAP18Q8IXM2 172 aa13.7□□□□□ -0.22
ARHGEF40-203ENST00000554514 FAM89BQ8N5H3 189 aa13.7□□□□□ -0.22
ARHGEF40-203ENST00000554514 SEMA6DQ8NFY4 1073 aa13.7□□□□□ -0.22
ARHGEF40-203ENST00000554514 GLS2Q9UI32 602 aa13.7□□□□□ -0.22
ARHGEF40-203ENST00000554514 C14orf166Q9Y224 244 aaKnown RBP13.7□□□□□ -0.22
ARHGEF40-203ENST00000554514 LOC102723996A0A087X1L8 192 aa13.7□□□□□ -0.22
ARHGEF40-203ENST00000554514 CCDC187A0A096LP49 1063 aa13.7□□□□□ -0.22
ARHGEF40-203ENST00000554514 TEX13DA0A0J9YY54 714 aaPredicted RBP13.7□□□□□ -0.22
ARHGEF40-203ENST00000554514 SGCEO43556 437 aa13.7□□□□□ -0.22
ARHGEF40-203ENST00000554514 ONECUT2O95948 504 aa13.7□□□□□ -0.22
ARHGEF40-203ENST00000554514 IGHV3-9P01782 118 aa13.7□□□□□ -0.22
ARHGEF40-203ENST00000554514 HGFACQ04756 655 aa13.7□□□□□ -0.22
ARHGEF40-203ENST00000554514 RSU1Q15404 277 aa13.7□□□□□ -0.22
ARHGEF40-203ENST00000554514 EXT1Q16394 746 aa13.7□□□□□ -0.22
ARHGEF40-203ENST00000554514 ZNF239Q16600 458 aaKnown RBP13.7□□□□□ -0.22
ARHGEF40-203ENST00000554514 LPAL2Q16609 132 aa13.7□□□□□ -0.22
ARHGEF40-203ENST00000554514 Q7L0L9 218 aa13.7□□□□□ -0.22
ARHGEF40-203ENST00000554514 PP6455Q8WZ26 134 aa13.7□□□□□ -0.22
ARHGEF40-203ENST00000554514 REEP6Q96HR9 211 aa13.7□□□□□ -0.22
ARHGEF40-203ENST00000554514 SCGB3A2Q96PL1 93 aa13.7□□□□□ -0.22
ARHGEF40-203ENST00000554514 SMOC1Q9H4F8 434 aa13.7□□□□□ -0.22
ARHGEF40-203ENST00000554514 RAB18Q9NP72 206 aa13.7□□□□□ -0.22
ARHGEF40-203ENST00000554514 A0A0U1RQV5 110 aa13.7□□□□□ -0.22
ARHGEF40-203ENST00000554514 PCP4L1A6NKN8 68 aa13.7□□□□□ -0.22
ARHGEF40-203ENST00000554514 BET1O15155 118 aa13.7□□□□□ -0.22
ARHGEF40-203ENST00000554514 SCGB1D2O95969 90 aa13.7□□□□□ -0.22
ARHGEF40-203ENST00000554514 FKBP2P26885 142 aaKnown RBP13.7□□□□□ -0.22
ARHGEF40-203ENST00000554514 PTGER4P35408 488 aa13.7□□□□□ -0.22
ARHGEF40-203ENST00000554514 FAM189A2Q15884 450 aa13.7□□□□□ -0.22
ARHGEF40-203ENST00000554514 PLEKHN1Q494U1 663 aaPredicted RBP13.7□□□□□ -0.22
ARHGEF40-203ENST00000554514 LHFPL1Q86WI0 220 aa13.7□□□□□ -0.22
ARHGEF40-203ENST00000554514 LINC00469Q8N7U9 141 aa13.7□□□□□ -0.22
ARHGEF40-203ENST00000554514 TSNAXQ99598 290 aaKnown RBP13.7□□□□□ -0.22
ARHGEF40-203ENST00000554514 ZNF700Q9H0M5 742 aa13.7□□□□□ -0.22
ARHGEF40-203ENST00000554514 ZDBF2Q9HCK1 2354 aa13.69□□□□□ -0.22
ARHGEF40-203ENST00000554514 ZNF169Q14929 603 aaPredicted RBP13.69□□□□□ -0.22
ARHGEF40-203ENST00000554514 TMEM88Q6PEY1 159 aa13.69□□□□□ -0.22
ARHGEF40-203ENST00000554514 PLXDC2Q6UX71 529 aa13.69□□□□□ -0.22
ARHGEF40-203ENST00000554514 PEG10Q86TG7 708 aaKnown RBP13.69□□□□□ -0.22
ARHGEF40-203ENST00000554514 CCDC36Q8IYA8 594 aa13.69□□□□□ -0.22
ARHGEF40-203ENST00000554514 NKX6-2Q9C056 277 aaPredicted RBP13.69□□□□□ -0.22
ARHGEF40-203ENST00000554514 PIGMQ9H3S5 423 aa13.69□□□□□ -0.22
ARHGEF40-203ENST00000554514 PRDM6Q9NQX0 595 aa13.69□□□□□ -0.22
ARHGEF40-203ENST00000554514 CYTL1Q9NRR1 136 aa13.69□□□□□ -0.22
ARHGEF40-203ENST00000554514 ZNF705EA8MWA4 302 aaPredicted RBP13.69□□□□□ -0.22
ARHGEF40-203ENST00000554514 CXCL13O43927 109 aa13.69□□□□□ -0.22
ARHGEF40-203ENST00000554514 VAMP5O95183 116 aa13.69□□□□□ -0.22
ARHGEF40-203ENST00000554514 F12P00748 615 aaPredicted RBP13.69□□□□□ -0.22
ARHGEF40-203ENST00000554514 IGLV3-1P01715 115 aa13.69□□□□□ -0.22
ARHGEF40-203ENST00000554514 CTSSP25774 331 aa13.69□□□□□ -0.22
ARHGEF40-203ENST00000554514 RBMXP38159 391 aaKnown RBP13.69□□□□□ -0.22
ARHGEF40-203ENST00000554514 FOLR3P41439 243 aa13.69□□□□□ -0.22
ARHGEF40-203ENST00000554514 FXYD4P59646 89 aa13.69□□□□□ -0.22
ARHGEF40-203ENST00000554514 DNTTIP1Q9H147 329 aa13.69□□□□□ -0.22
ARHGEF40-203ENST00000554514 DNASE2O00115 360 aaPredicted RBP13.68□□□□□ -0.22
ARHGEF40-203ENST00000554514 ACTL6AO96019 429 aa13.68□□□□□ -0.22
ARHGEF40-203ENST00000554514 RFPL3SP0C7P2 107 aa13.68□□□□□ -0.22
ARHGEF40-203ENST00000554514 RCC1P18754 421 aaPredicted RBP13.68□□□□□ -0.22
ARHGEF40-203ENST00000554514 HTR5AP47898 357 aa13.68□□□□□ -0.22
ARHGEF40-203ENST00000554514 PRSS54Q6PEW0 395 aa13.68□□□□□ -0.22
ARHGEF40-203ENST00000554514 CPNE2Q96FN4 548 aaPredicted RBP13.68□□□□□ -0.22
ARHGEF40-203ENST00000554514 C2orf50Q96LR7 162 aa13.68□□□□□ -0.22
ARHGEF40-203ENST00000554514 SMIM3Q9BZL3 60 aa13.68□□□□□ -0.22
ARHGEF40-203ENST00000554514 SLC6A15Q9H2J7 730 aa13.68□□□□□ -0.22
ARHGEF40-203ENST00000554514 HRH4Q9H3N8 390 aa13.68□□□□□ -0.22
ARHGEF40-203ENST00000554514 TREM1Q9NP99 234 aa13.68□□□□□ -0.22
ARHGEF40-203ENST00000554514 FOXD3Q9UJU5 478 aaPredicted RBP13.68□□□□□ -0.22
ARHGEF40-203ENST00000554514 ZNF850A8MQ14 1090 aa13.68□□□□□ -0.22
ARHGEF40-203ENST00000554514 FOXI3A8MTJ6 420 aaPredicted RBP13.68□□□□□ -0.22
ARHGEF40-203ENST00000554514 SERPINE3A8MV23 424 aa13.68□□□□□ -0.22
ARHGEF40-203ENST00000554514 ABCD4O14678 606 aa13.68□□□□□ -0.22
ARHGEF40-203ENST00000554514 CARD18P57730 90 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms