RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 ARV1Q9H2C2 271 aa3.3□□□□□ -1.88
SCFD1-211ENST00000554437 OR51B5Q9H339 312 aa3.3□□□□□ -1.88
SCFD1-211ENST00000554437 THSD7BQ9C0I4 1608 aa3.3□□□□□ -1.88
SCFD1-211ENST00000554437 PFDN6O15212 129 aa3.29□□□□□ -1.88
SCFD1-211ENST00000554437 BIRC5O15392 142 aa3.29□□□□□ -1.88
SCFD1-211ENST00000554437 SYNGR1O43759 233 aa3.29□□□□□ -1.88
SCFD1-211ENST00000554437 CTNSO60931 367 aa3.29□□□□□ -1.88
SCFD1-211ENST00000554437 SNAPINO95295 136 aa3.29□□□□□ -1.88
SCFD1-211ENST00000554437 EIF4EP06730 217 aaKnown RBP3.29□□□□□ -1.88
SCFD1-211ENST00000554437 C8orf88P0DMB2 117 aa3.29□□□□□ -1.88
SCFD1-211ENST00000554437 THRAP10827 490 aa3.29□□□□□ -1.88
SCFD1-211ENST00000554437 PRPS1L1P21108 318 aa3.29□□□□□ -1.88
SCFD1-211ENST00000554437 MYL9P24844 172 aa3.29□□□□□ -1.88
SCFD1-211ENST00000554437 HTR1EP28566 365 aa3.29□□□□□ -1.88
SCFD1-211ENST00000554437 FMO3P31513 532 aa3.29□□□□□ -1.88
SCFD1-211ENST00000554437 GNG10P50151 68 aa3.29□□□□□ -1.88
SCFD1-211ENST00000554437 DLX6P56179 175 aa3.29□□□□□ -1.88
SCFD1-211ENST00000554437 RAB38P57729 211 aa3.29□□□□□ -1.88
SCFD1-211ENST00000554437 ERVS71-1P61550 626 aa3.29□□□□□ -1.88
SCFD1-211ENST00000554437 CCL7P80098 99 aa3.29□□□□□ -1.88
SCFD1-211ENST00000554437 DAZ2Q13117 558 aaKnown RBP3.29□□□□□ -1.88
SCFD1-211ENST00000554437 AQP6Q13520 282 aa3.29□□□□□ -1.88
SCFD1-211ENST00000554437 EIF4EBP2Q13542 120 aaPredicted RBP3.29□□□□□ -1.88
SCFD1-211ENST00000554437 QPRTQ15274 297 aa3.29□□□□□ -1.88
SCFD1-211ENST00000554437 SGCAQ16586 387 aa3.29□□□□□ -1.88
SCFD1-211ENST00000554437 ZSCAN26Q16670 478 aa3.29□□□□□ -1.88
SCFD1-211ENST00000554437 TBC1D28Q2M2D7 210 aa3.29□□□□□ -1.88
SCFD1-211ENST00000554437 CEACAM21Q3KPI0 293 aa3.29□□□□□ -1.88
SCFD1-211ENST00000554437 TTLL9Q3SXZ7 439 aa3.29□□□□□ -1.88
SCFD1-211ENST00000554437 ACSM3Q53FZ2 586 aa3.29□□□□□ -1.88
SCFD1-211ENST00000554437 LCE3AQ5TA76 89 aa3.29□□□□□ -1.88
SCFD1-211ENST00000554437 SPOPLQ6IQ16 392 aa3.29□□□□□ -1.88
SCFD1-211ENST00000554437 DNM1P34Q6PK57 102 aa3.29□□□□□ -1.88
SCFD1-211ENST00000554437 AKAP14Q86UN6 197 aa3.29□□□□□ -1.88
SCFD1-211ENST00000554437 THOC6Q86W42 341 aaKnown RBP3.29□□□□□ -1.88
SCFD1-211ENST00000554437 TRAPPC5Q8IUR0 188 aa3.29□□□□□ -1.88
SCFD1-211ENST00000554437 BLIDQ8IZY5 108 aa3.29□□□□□ -1.88
SCFD1-211ENST00000554437 C20orf203Q8NBC4 194 aa3.29□□□□□ -1.88
SCFD1-211ENST00000554437 CCDC54Q8NEL0 328 aa3.29□□□□□ -1.88
SCFD1-211ENST00000554437 OR51Q1Q8NH59 317 aa3.29□□□□□ -1.88
SCFD1-211ENST00000554437 PIGXQ8TBF5 258 aa3.29□□□□□ -1.88
SCFD1-211ENST00000554437 BLOC1S5Q8TDH9 187 aa3.29□□□□□ -1.88
SCFD1-211ENST00000554437 MRAP2Q96G30 205 aa3.29□□□□□ -1.88
SCFD1-211ENST00000554437 SLC35E1Q96K37 410 aa3.29□□□□□ -1.88
SCFD1-211ENST00000554437 BTN2A3PQ96KV6 586 aa3.29□□□□□ -1.88
SCFD1-211ENST00000554437 KCTD7Q96MP8 289 aa3.29□□□□□ -1.88
SCFD1-211ENST00000554437 RNF145Q96MT1 663 aa3.29□□□□□ -1.88
SCFD1-211ENST00000554437 RBP7Q96R05 134 aa3.29□□□□□ -1.88
SCFD1-211ENST00000554437 SRMSQ9H3Y6 488 aa3.29□□□□□ -1.88
SCFD1-211ENST00000554437 UGT1A7Q9HAW7 530 aa3.29□□□□□ -1.88
SCFD1-211ENST00000554437 UGT1A8Q9HAW9 530 aa3.29□□□□□ -1.88
SCFD1-211ENST00000554437 PLGRKTQ9HBL7 147 aa3.29□□□□□ -1.88
SCFD1-211ENST00000554437 ABCB9Q9NP78 766 aa3.29□□□□□ -1.88
SCFD1-211ENST00000554437 EXOSC4Q9NPD3 245 aaKnown RBP3.29□□□□□ -1.88
SCFD1-211ENST00000554437 MRPL40Q9NQ50 206 aaKnown RBP3.29□□□□□ -1.88
SCFD1-211ENST00000554437 DAZ3Q9NR90 486 aaKnown RBP3.29□□□□□ -1.88
SCFD1-211ENST00000554437 FBXO6Q9NRD1 293 aaPredicted RBP3.29□□□□□ -1.88
SCFD1-211ENST00000554437 PAQR5Q9NXK6 330 aaPredicted RBP3.29□□□□□ -1.88
SCFD1-211ENST00000554437 SLC7A11Q9UPY5 501 aa3.29□□□□□ -1.88
SCFD1-211ENST00000554437 GTF3C1Q12789 2109 aa3.29□□□□□ -1.88
SCFD1-211ENST00000554437 C9orf84Q5VXU9 1444 aa3.28□□□□□ -1.88
SCFD1-211ENST00000554437 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.28□□□□□ -1.88
SCFD1-211ENST00000554437 TRAV8-4A0A0B4J246 113 aa3.28□□□□□ -1.88
SCFD1-211ENST00000554437 OR5K4A6NMS3 321 aa3.28□□□□□ -1.88
SCFD1-211ENST00000554437 F5H5T6 163 aa3.28□□□□□ -1.88
SCFD1-211ENST00000554437 H3BQV1 296 aa3.28□□□□□ -1.88
SCFD1-211ENST00000554437 CCRL2O00421 344 aa3.28□□□□□ -1.88
SCFD1-211ENST00000554437 UBDO15205 165 aa3.28□□□□□ -1.88
SCFD1-211ENST00000554437 ACOX3O15254 700 aa3.28□□□□□ -1.88
SCFD1-211ENST00000554437 RTL8CO15255 209 aa3.28□□□□□ -1.88
SCFD1-211ENST00000554437 RDH16O75452 317 aa3.28□□□□□ -1.88
SCFD1-211ENST00000554437 CA11O75493 328 aa3.28□□□□□ -1.88
SCFD1-211ENST00000554437 UPK1BO75841 260 aa3.28□□□□□ -1.88
SCFD1-211ENST00000554437 C6orf47O95873 294 aa3.28□□□□□ -1.88
SCFD1-211ENST00000554437 PTHP01270 115 aa3.28□□□□□ -1.88
SCFD1-211ENST00000554437 P01737 135 aa3.28□□□□□ -1.88
SCFD1-211ENST00000554437 ISG15P05161 165 aa3.28□□□□□ -1.88
SCFD1-211ENST00000554437 CDK1P06493 297 aa3.28□□□□□ -1.88
SCFD1-211ENST00000554437 SLC35G6P0C7Q6 338 aa3.28□□□□□ -1.88
SCFD1-211ENST00000554437 GKN3PP0CG01 181 aa3.28□□□□□ -1.88
SCFD1-211ENST00000554437 OR5H8P0DN80 308 aa3.28□□□□□ -1.88
SCFD1-211ENST00000554437 SLC2A1P11166 492 aa3.28□□□□□ -1.88
SCFD1-211ENST00000554437 BTCP35070 178 aa3.28□□□□□ -1.88
SCFD1-211ENST00000554437 KIR3DL2P43630 455 aa3.28□□□□□ -1.88
SCFD1-211ENST00000554437 IDH2P48735 452 aaKnown RBP3.28□□□□□ -1.88
SCFD1-211ENST00000554437 IL5RAQ01344 420 aa3.28□□□□□ -1.88
SCFD1-211ENST00000554437 ARFRP1Q13795 201 aa3.28□□□□□ -1.88
SCFD1-211ENST00000554437 PDK2Q15119 407 aa3.28□□□□□ -1.88
SCFD1-211ENST00000554437 MPPED2Q15777 294 aa3.28□□□□□ -1.88
SCFD1-211ENST00000554437 SYT6Q5T7P8 510 aaPredicted RBP3.28□□□□□ -1.88
SCFD1-211ENST00000554437 ACBD4Q8NC06 268 aa3.28□□□□□ -1.88
SCFD1-211ENST00000554437 OR1N2Q8NGR9 330 aa3.28□□□□□ -1.88
SCFD1-211ENST00000554437 GEMIN6Q8WXD5 167 aaKnown RBP3.28□□□□□ -1.88
SCFD1-211ENST00000554437 CREB3L1Q96BA8 519 aa3.28□□□□□ -1.88
SCFD1-211ENST00000554437 FAM3DQ96BQ1 224 aa3.28□□□□□ -1.88
SCFD1-211ENST00000554437 DGCR14Q96DF8 476 aaKnown RBP3.28□□□□□ -1.88
SCFD1-211ENST00000554437 RILPQ96NA2 401 aa3.28□□□□□ -1.88
SCFD1-211ENST00000554437 NUDT9Q9BW91 350 aa3.28□□□□□ -1.88
SCFD1-211ENST00000554437 BCL2L14Q9BZR8 327 aa3.28□□□□□ -1.88
SCFD1-211ENST00000554437 RGS18Q9NS28 235 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms