RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 WDR12Q9GZL7 423 aaKnown RBP10.94□□□□□ -0.66
SHMT2-211ENST00000554310 NXF2Q9GZY0 626 aaKnown RBP10.94□□□□□ -0.66
SHMT2-211ENST00000554310 MMP27Q9H306 513 aa10.94□□□□□ -0.66
SHMT2-211ENST00000554310 METTL17Q9H7H0 456 aaPredicted RBP10.94□□□□□ -0.66
SHMT2-211ENST00000554310 MOB1AQ9H8S9 216 aa10.94□□□□□ -0.66
SHMT2-211ENST00000554310 HMG20AQ9NP66 347 aa10.94□□□□□ -0.66
SHMT2-211ENST00000554310 AKIP1Q9NQ31 210 aa10.94□□□□□ -0.66
SHMT2-211ENST00000554310 TRIM36Q9NQ86 728 aa10.94□□□□□ -0.66
SHMT2-211ENST00000554310 FAM206AQ9NX38 181 aa10.94□□□□□ -0.66
SHMT2-211ENST00000554310 METRNQ9UJH8 293 aa10.94□□□□□ -0.66
SHMT2-211ENST00000554310 IKZF2Q9UKS7 526 aa10.94□□□□□ -0.66
SHMT2-211ENST00000554310 STUB1Q9UNE7 303 aa10.94□□□□□ -0.66
SHMT2-211ENST00000554310 COPS3Q9UNS2 423 aa10.94□□□□□ -0.66
SHMT2-211ENST00000554310 MPC1Q9Y5U8 109 aa10.94□□□□□ -0.66
SHMT2-211ENST00000554310 DOCK11Q5JSL3 2073 aa10.94□□□□□ -0.66
SHMT2-211ENST00000554310 DNHD1Q96M86 4753 aa10.93□□□□□ -0.66
SHMT2-211ENST00000554310 LOC105371242A0A075B767 164 aa10.93□□□□□ -0.66
SHMT2-211ENST00000554310 A0A0U1RQV5 110 aa10.93□□□□□ -0.66
SHMT2-211ENST00000554310 LOC100506127A0A0U1RQW1 187 aa10.93□□□□□ -0.66
SHMT2-211ENST00000554310 TMEM269A0A1B0GVZ9 245 aa10.93□□□□□ -0.66
SHMT2-211ENST00000554310 A6NLC8 198 aa10.93□□□□□ -0.66
SHMT2-211ENST00000554310 RNF212BA8MTL3 300 aa10.93□□□□□ -0.66
SHMT2-211ENST00000554310 PRR32B1ATL7 298 aa10.93□□□□□ -0.66
SHMT2-211ENST00000554310 ZNF670-ZNF695F2Z2N8 137 aa10.93□□□□□ -0.66
SHMT2-211ENST00000554310 J3QRE1 110 aa10.93□□□□□ -0.66
SHMT2-211ENST00000554310 GPX5O75715 221 aa10.93□□□□□ -0.66
SHMT2-211ENST00000554310 ZNF205O95201 554 aa10.93□□□□□ -0.66
SHMT2-211ENST00000554310 WNT2P09544 360 aa10.93□□□□□ -0.66
SHMT2-211ENST00000554310 PSMA1P25786 263 aaKnown RBP10.93□□□□□ -0.66
SHMT2-211ENST00000554310 HCCSP53701 268 aa10.93□□□□□ -0.66
SHMT2-211ENST00000554310 SEC61A1P61619 476 aaKnown RBP10.93□□□□□ -0.66
SHMT2-211ENST00000554310 POU4F2Q12837 409 aa10.93□□□□□ -0.66
SHMT2-211ENST00000554310 TPBGQ13641 420 aa10.93□□□□□ -0.66
SHMT2-211ENST00000554310 FAM201AQ5SY85 155 aa10.93□□□□□ -0.66
SHMT2-211ENST00000554310 ZNF322Q6U7Q0 402 aaPredicted RBP10.93□□□□□ -0.66
SHMT2-211ENST00000554310 PHC2Q8IXK0 858 aa10.93□□□□□ -0.66
SHMT2-211ENST00000554310 ZNF485Q8NCK3 441 aa10.93□□□□□ -0.66
SHMT2-211ENST00000554310 OR8B3Q8NGG8 313 aa10.93□□□□□ -0.66
SHMT2-211ENST00000554310 OR52N1Q8NH53 320 aa10.93□□□□□ -0.66
SHMT2-211ENST00000554310 OR8B2Q96RD0 313 aa10.93□□□□□ -0.66
SHMT2-211ENST00000554310 CENPOQ9BU64 300 aa10.93□□□□□ -0.66
SHMT2-211ENST00000554310 C7orf69Q9H7B7 122 aa10.93□□□□□ -0.66
SHMT2-211ENST00000554310 INPP5EQ9NRR6 644 aa10.93□□□□□ -0.66
SHMT2-211ENST00000554310 C1orf123Q9NWV4 160 aa10.93□□□□□ -0.66
SHMT2-211ENST00000554310 RHBDD3Q9Y3P4 386 aa10.93□□□□□ -0.66
SHMT2-211ENST00000554310 LGALS8O00214 317 aa10.92□□□□□ -0.66
SHMT2-211ENST00000554310 PSMD9O00233 223 aa10.92□□□□□ -0.66
SHMT2-211ENST00000554310 TCF21O43680 179 aa10.92□□□□□ -0.66
SHMT2-211ENST00000554310 CST4P01036 141 aa10.92□□□□□ -0.66
SHMT2-211ENST00000554310 GRPP07492 148 aa10.92□□□□□ -0.66
SHMT2-211ENST00000554310 ZNF12P17014 697 aa10.92□□□□□ -0.66
SHMT2-211ENST00000554310 ACKR3P25106 362 aa10.92□□□□□ -0.66
SHMT2-211ENST00000554310 TGFBR1P36897 503 aa10.92□□□□□ -0.66
SHMT2-211ENST00000554310 PITPNBP48739 271 aa10.92□□□□□ -0.66
SHMT2-211ENST00000554310 GNB2P62879 340 aa10.92□□□□□ -0.66
SHMT2-211ENST00000554310 EGR3Q06889 387 aa10.92□□□□□ -0.66
SHMT2-211ENST00000554310 C1orf229Q6ZS94 237 aaPredicted RBP10.92□□□□□ -0.66
SHMT2-211ENST00000554310 WDR86Q86TI4 376 aa10.92□□□□□ -0.66
SHMT2-211ENST00000554310 DEFB108BQ8NET1 73 aa10.92□□□□□ -0.66
SHMT2-211ENST00000554310 OR51G2Q8NGK0 314 aa10.92□□□□□ -0.66
SHMT2-211ENST00000554310 MCFD2Q8NI22 146 aa10.92□□□□□ -0.66
SHMT2-211ENST00000554310 NANPQ8TBE9 248 aa10.92□□□□□ -0.66
SHMT2-211ENST00000554310 ITPKCQ96DU7 683 aa10.92□□□□□ -0.66
SHMT2-211ENST00000554310 LYZL4Q96KX0 146 aa10.92□□□□□ -0.66
SHMT2-211ENST00000554310 MICU1Q9BPX6 476 aa10.92□□□□□ -0.66
SHMT2-211ENST00000554310 ZNF649Q9BS31 505 aa10.92□□□□□ -0.66
SHMT2-211ENST00000554310 RTL8AQ9BWD3 113 aa10.92□□□□□ -0.66
SHMT2-211ENST00000554310 TTTY10Q9BZA0 68 aa10.92□□□□□ -0.66
SHMT2-211ENST00000554310 ERVK13-1Q9NX77 482 aa10.92□□□□□ -0.66
SHMT2-211ENST00000554310 NUFIP1Q9UHK0 495 aaKnown RBP10.92□□□□□ -0.66
SHMT2-211ENST00000554310 hCG_1807616A0A1W2PRN6 198 aa10.91□□□□□ -0.66
SHMT2-211ENST00000554310 OOEPA6NGQ2 149 aa10.91□□□□□ -0.66
SHMT2-211ENST00000554310 TMEM210A6NLX4 147 aa10.91□□□□□ -0.66
SHMT2-211ENST00000554310 NDUFA2O43678 99 aa10.91□□□□□ -0.66
SHMT2-211ENST00000554310 AVPP01185 164 aa10.91□□□□□ -0.66
SHMT2-211ENST00000554310 EPHA1P21709 976 aa10.91□□□□□ -0.66
SHMT2-211ENST00000554310 CD80P33681 288 aa10.91□□□□□ -0.66
SHMT2-211ENST00000554310 PSMB10P40306 273 aa10.91□□□□□ -0.66
SHMT2-211ENST00000554310 MAP2K3P46734 347 aa10.91□□□□□ -0.66
SHMT2-211ENST00000554310 BDH1Q02338 343 aa10.91□□□□□ -0.66
SHMT2-211ENST00000554310 ZNF154Q13106 437 aa10.91□□□□□ -0.66
SHMT2-211ENST00000554310 PRDX4Q13162 271 aa10.91□□□□□ -0.66
SHMT2-211ENST00000554310 OR2G6Q5TZ20 316 aa10.91□□□□□ -0.66
SHMT2-211ENST00000554310 LIPNQ5VXI9 398 aa10.91□□□□□ -0.66
SHMT2-211ENST00000554310 KRT74Q7RTS7 529 aa10.91□□□□□ -0.66
SHMT2-211ENST00000554310 COMMD2Q86X83 199 aa10.91□□□□□ -0.66
SHMT2-211ENST00000554310 GCSAMQ8N6F7 178 aa10.91□□□□□ -0.66
SHMT2-211ENST00000554310 ACBD7Q8N6N7 88 aa10.91□□□□□ -0.66
SHMT2-211ENST00000554310 OR1M1Q8NGA1 313 aa10.91□□□□□ -0.66
SHMT2-211ENST00000554310 SPATA3Q8NHX4 192 aa10.91□□□□□ -0.66
SHMT2-211ENST00000554310 UFD1Q92890 307 aa10.91□□□□□ -0.66
SHMT2-211ENST00000554310 MRI1Q9BV20 369 aa10.91□□□□□ -0.66
SHMT2-211ENST00000554310 PBOV1Q9GZY1 135 aa10.91□□□□□ -0.66
SHMT2-211ENST00000554310 TLNRD1Q9H1K6 362 aa10.91□□□□□ -0.66
SHMT2-211ENST00000554310 MMP26Q9NRE1 261 aa10.91□□□□□ -0.66
SHMT2-211ENST00000554310 CLN8Q9UBY8 286 aa10.91□□□□□ -0.66
SHMT2-211ENST00000554310 OPN4Q9UHM6 478 aa10.91□□□□□ -0.66
SHMT2-211ENST00000554310 SSR3Q9UNL2 185 aa10.91□□□□□ -0.66
SHMT2-211ENST00000554310 CAB39Q9Y376 341 aaPredicted RBP10.91□□□□□ -0.66
SHMT2-211ENST00000554310 SF3B6Q9Y3B4 125 aaKnown RBP10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms