RNA–Protein interactions for RNA: ENST00000553949.1

SHMT2-209, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-209ENST00000553949 HAGHLQ6PII5 290 aaPredicted RBP10.33□□□□□ -0.76
SHMT2-209ENST00000553949 ZNF826PQ6ZT77 177 aa10.33□□□□□ -0.76
SHMT2-209ENST00000553949 LHFPL2Q6ZUX7 228 aa10.33□□□□□ -0.76
SHMT2-209ENST00000553949 ZNF573Q86YE8 665 aa10.33□□□□□ -0.76
SHMT2-209ENST00000553949 SCCPDHQ8NBX0 429 aa10.33□□□□□ -0.76
SHMT2-209ENST00000553949 OR13F1Q8NGS4 319 aa10.33□□□□□ -0.76
SHMT2-209ENST00000553949 OR11L1Q8NGX0 322 aa10.33□□□□□ -0.76
SHMT2-209ENST00000553949 TMIGD2Q96BF3 282 aa10.33□□□□□ -0.76
SHMT2-209ENST00000553949 YIPF6Q96EC8 236 aa10.33□□□□□ -0.76
SHMT2-209ENST00000553949 OR51E2Q9H255 320 aa10.33□□□□□ -0.76
SHMT2-209ENST00000553949 TMEM138Q9NPI0 162 aa10.33□□□□□ -0.76
SHMT2-209ENST00000553949 TMEM106BQ9NUM4 274 aa10.33□□□□□ -0.76
SHMT2-209ENST00000553949 C1orf123Q9NWV4 160 aa10.33□□□□□ -0.76
SHMT2-209ENST00000553949 SCOCQ9UIL1 159 aa10.33□□□□□ -0.76
SHMT2-209ENST00000553949 hCG_1807616A0A1W2PRN6 198 aa10.32□□□□□ -0.76
SHMT2-209ENST00000553949 LRRC30A6NM36 301 aa10.32□□□□□ -0.76
SHMT2-209ENST00000553949 IFNL4K9M1U5 179 aa10.32□□□□□ -0.76
SHMT2-209ENST00000553949 MAGEB3O15480 346 aa10.32□□□□□ -0.76
SHMT2-209ENST00000553949 CYB5R3P00387 301 aaPredicted RBP10.32□□□□□ -0.76
SHMT2-209ENST00000553949 ALDOBP05062 364 aa10.32□□□□□ -0.76
SHMT2-209ENST00000553949 CSF3P09919 207 aa10.32□□□□□ -0.76
SHMT2-209ENST00000553949 IRF2P14316 349 aa10.32□□□□□ -0.76
SHMT2-209ENST00000553949 SRMP19623 302 aa10.32□□□□□ -0.76
SHMT2-209ENST00000553949 CALRP27797 417 aaKnown RBP10.32□□□□□ -0.76
SHMT2-209ENST00000553949 BDKRB2P30411 391 aa10.32□□□□□ -0.76
SHMT2-209ENST00000553949 RBMXP38159 391 aaKnown RBP10.32□□□□□ -0.76
SHMT2-209ENST00000553949 PDLIM4P50479 330 aa10.32□□□□□ -0.76
SHMT2-209ENST00000553949 ART1P52961 327 aa10.32□□□□□ -0.76
SHMT2-209ENST00000553949 ATP1B3P54709 279 aa10.32□□□□□ -0.76
SHMT2-209ENST00000553949 DSCR9P59020 149 aa10.32□□□□□ -0.76
SHMT2-209ENST00000553949 CLEC12BQ2HXU8 276 aa10.32□□□□□ -0.76
SHMT2-209ENST00000553949 ZNF181Q2M3W8 571 aa10.32□□□□□ -0.76
SHMT2-209ENST00000553949 CLEC2AQ6UVW9 174 aa10.32□□□□□ -0.76
SHMT2-209ENST00000553949 PRSS57Q6UWY2 283 aa10.32□□□□□ -0.76
SHMT2-209ENST00000553949 WDR82Q6UXN9 313 aa10.32□□□□□ -0.76
SHMT2-209ENST00000553949 DNM1P46Q6ZS02 220 aa10.32□□□□□ -0.76
SHMT2-209ENST00000553949 ANGPTL5Q86XS5 388 aa10.32□□□□□ -0.76
SHMT2-209ENST00000553949 CALHM1Q8IU99 346 aa10.32□□□□□ -0.76
SHMT2-209ENST00000553949 KRTAP1-3Q8IUG1 177 aa10.32□□□□□ -0.76
SHMT2-209ENST00000553949 OR52N4Q8NGI2 321 aa10.32□□□□□ -0.76
SHMT2-209ENST00000553949 HPS1Q92902 700 aa10.32□□□□□ -0.76
SHMT2-209ENST00000553949 SPACA5Q96QH8 159 aa10.32□□□□□ -0.76
SHMT2-209ENST00000553949 CHODLQ9H9P2 273 aa10.32□□□□□ -0.76
SHMT2-209ENST00000553949 TCF7L1Q9HCS4 588 aa10.32□□□□□ -0.76
SHMT2-209ENST00000553949 EXOSC4Q9NPD3 245 aaKnown RBP10.32□□□□□ -0.76
SHMT2-209ENST00000553949 DCAF16Q9NXF7 216 aa10.32□□□□□ -0.76
SHMT2-209ENST00000553949 SSR3Q9UNL2 185 aa10.32□□□□□ -0.76
SHMT2-209ENST00000553949 NOTCH2Q04721 2471 aa10.31□□□□□ -0.76
SHMT2-209ENST00000553949 TRIM64BA6NI03 449 aa10.31□□□□□ -0.76
SHMT2-209ENST00000553949 CYSRT1A8MQ03 144 aa10.31□□□□□ -0.76
SHMT2-209ENST00000553949 TMEM178BH3BS89 294 aa10.31□□□□□ -0.76
SHMT2-209ENST00000553949 J3QT63 122 aa10.31□□□□□ -0.76
SHMT2-209ENST00000553949 MAS1P04201 325 aa10.31□□□□□ -0.76
SHMT2-209ENST00000553949 FGF9P31371 208 aaPredicted RBP10.31□□□□□ -0.76
SHMT2-209ENST00000553949 RPL5P46777 297 aaKnown RBP10.31□□□□□ -0.76
SHMT2-209ENST00000553949 TMEM33P57088 247 aa10.31□□□□□ -0.76
SHMT2-209ENST00000553949 RIN1Q13671 783 aa10.31□□□□□ -0.76
SHMT2-209ENST00000553949 KISS1Q15726 138 aa10.31□□□□□ -0.76
SHMT2-209ENST00000553949 TIMM50Q3ZCQ8 353 aa10.31□□□□□ -0.76
SHMT2-209ENST00000553949 DDI2Q5TDH0 399 aa10.31□□□□□ -0.76
SHMT2-209ENST00000553949 C22orf42Q6IC83 251 aa10.31□□□□□ -0.76
SHMT2-209ENST00000553949 CRIP3Q6Q6R5 217 aa10.31□□□□□ -0.76
SHMT2-209ENST00000553949 RNF144BQ7Z419 303 aa10.31□□□□□ -0.76
SHMT2-209ENST00000553949 GPR141Q7Z602 305 aa10.31□□□□□ -0.76
SHMT2-209ENST00000553949 LRRTM1Q86UE6 522 aa10.31□□□□□ -0.76
SHMT2-209ENST00000553949 SATL1Q86VE3 508 aa10.31□□□□□ -0.76
SHMT2-209ENST00000553949 AQP3Q92482 292 aa10.31□□□□□ -0.76
SHMT2-209ENST00000553949 FAM168AQ92567 244 aa10.31□□□□□ -0.76
SHMT2-209ENST00000553949 RFT1Q96AA3 541 aa10.31□□□□□ -0.76
SHMT2-209ENST00000553949 CPNE2Q96FN4 548 aaPredicted RBP10.31□□□□□ -0.76
SHMT2-209ENST00000553949 CHCHD6Q9BRQ6 235 aa10.31□□□□□ -0.76
SHMT2-209ENST00000553949 PKIBQ9C010 78 aa10.31□□□□□ -0.76
SHMT2-209ENST00000553949 SLITRK2Q9H156 845 aa10.31□□□□□ -0.76
SHMT2-209ENST00000553949 SNTG1Q9NSN8 517 aa10.31□□□□□ -0.76
SHMT2-209ENST00000553949 TXNL4BQ9NX01 149 aaKnown RBP10.31□□□□□ -0.76
SHMT2-209ENST00000553949 RNF7Q9UBF6 113 aa10.31□□□□□ -0.76
SHMT2-209ENST00000553949 ANKRD17O75179 2603 aaKnown RBP10.31□□□□□ -0.76
SHMT2-209ENST00000553949 AKAP9Q99996 3911 aa10.3□□□□□ -0.76
SHMT2-209ENST00000553949 LOC100506127A0A0U1RQW1 187 aa10.3□□□□□ -0.76
SHMT2-209ENST00000553949 MEGF11A6BM72 1044 aa10.3□□□□□ -0.76
SHMT2-209ENST00000553949 CLDN25C9JDP6 229 aa10.3□□□□□ -0.76
SHMT2-209ENST00000553949 NDUFS8O00217 210 aa10.3□□□□□ -0.76
SHMT2-209ENST00000553949 PPIHO43447 177 aaKnown RBP10.3□□□□□ -0.76
SHMT2-209ENST00000553949 SYNGR1O43759 233 aa10.3□□□□□ -0.76
SHMT2-209ENST00000553949 AIREO43918 545 aa10.3□□□□□ -0.76
SHMT2-209ENST00000553949 RHBDL1O75783 438 aa10.3□□□□□ -0.76
SHMT2-209ENST00000553949 PLATP00750 562 aa10.3□□□□□ -0.76
SHMT2-209ENST00000553949 ADRA2CP18825 462 aa10.3□□□□□ -0.76
SHMT2-209ENST00000553949 MPZP25189 248 aa10.3□□□□□ -0.76
SHMT2-209ENST00000553949 GIFP27352 417 aa10.3□□□□□ -0.76
SHMT2-209ENST00000553949 ZNF93P35789 620 aaPredicted RBP10.3□□□□□ -0.76
SHMT2-209ENST00000553949 CFHR2P36980 270 aa10.3□□□□□ -0.76
SHMT2-209ENST00000553949 IL24Q13007 206 aa10.3□□□□□ -0.76
SHMT2-209ENST00000553949 PDZK1IP1Q13113 114 aa10.3□□□□□ -0.76
SHMT2-209ENST00000553949 SHEQ5VZ18 495 aa10.3□□□□□ -0.76
SHMT2-209ENST00000553949 C1orf87Q8N0U7 546 aa10.3□□□□□ -0.76
SHMT2-209ENST00000553949 NKAIN3Q8N8D7 197 aa10.3□□□□□ -0.76
SHMT2-209ENST00000553949 OR5D18Q8NGL1 313 aa10.3□□□□□ -0.76
SHMT2-209ENST00000553949 OR10Z1Q8NGY1 313 aa10.3□□□□□ -0.76
SHMT2-209ENST00000553949 ZNF671Q8TAW3 534 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms