RNA–Protein interactions for RNA: ENST00000553619.1

VTI1B-202, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-202ENST00000553619 AK6Q9Y3D8 172 aaKnown RBP4.3□□□□□ -1.72
VTI1B-202ENST00000553619 CMAHPQ9Y471 501 aa4.3□□□□□ -1.72
VTI1B-202ENST00000553619 PCNX1Q96RV3 2341 aa4.3□□□□□ -1.72
VTI1B-202ENST00000553619 IGF2RP11717 2491 aa4.3□□□□□ -1.72
VTI1B-202ENST00000553619 DIDO1Q9BTC0 2240 aaKnown RBP4.29□□□□□ -1.72
VTI1B-202ENST00000553619 FRYLO94915 3013 aa4.29□□□□□ -1.72
VTI1B-202ENST00000553619 hCG_38984A0A1B0GV85 526 aa4.29□□□□□ -1.72
VTI1B-202ENST00000553619 NKX2-6A6NCS4 301 aa4.29□□□□□ -1.72
VTI1B-202ENST00000553619 METTL21EPA6NDL7 271 aa4.29□□□□□ -1.72
VTI1B-202ENST00000553619 IFITM5A6NNB3 132 aa4.29□□□□□ -1.72
VTI1B-202ENST00000553619 CD300LBA8K4G0 201 aa4.29□□□□□ -1.72
VTI1B-202ENST00000553619 FAM25EA8MYX2 175 aa4.29□□□□□ -1.72
VTI1B-202ENST00000553619 IQCF6A8MYZ5 107 aa4.29□□□□□ -1.72
VTI1B-202ENST00000553619 PRSS44E7EML9 344 aa4.29□□□□□ -1.72
VTI1B-202ENST00000553619 H3BSH0 61 aa4.29□□□□□ -1.72
VTI1B-202ENST00000553619 H3BUI4 141 aa4.29□□□□□ -1.72
VTI1B-202ENST00000553619 AIPO00170 330 aa4.29□□□□□ -1.72
VTI1B-202ENST00000553619 PIN1P1O15428 100 aa4.29□□□□□ -1.72
VTI1B-202ENST00000553619 RGS5O15539 181 aa4.29□□□□□ -1.72
VTI1B-202ENST00000553619 SMPD2O60906 423 aa4.29□□□□□ -1.72
VTI1B-202ENST00000553619 ZNF780AO75290 641 aaPredicted RBP4.29□□□□□ -1.72
VTI1B-202ENST00000553619 CLPXO76031 633 aa4.29□□□□□ -1.72
VTI1B-202ENST00000553619 CYB5AP00167 134 aa4.29□□□□□ -1.72
VTI1B-202ENST00000553619 NGFP01138 241 aa4.29□□□□□ -1.72
VTI1B-202ENST00000553619 HCKP08631 526 aa4.29□□□□□ -1.72
VTI1B-202ENST00000553619 UBBP0CG47 229 aa4.29□□□□□ -1.72
VTI1B-202ENST00000553619 CD37P11049 281 aa4.29□□□□□ -1.72
VTI1B-202ENST00000553619 PRF1P14222 555 aa4.29□□□□□ -1.72
VTI1B-202ENST00000553619 ZNF250P15622 560 aa4.29□□□□□ -1.72
VTI1B-202ENST00000553619 KITLGP21583 273 aa4.29□□□□□ -1.72
VTI1B-202ENST00000553619 PTBP1P26599 531 aaKnown RBP eCLIP4.29□□□□□ -1.72
VTI1B-202ENST00000553619 HTR2CP28335 458 aa4.29□□□□□ -1.72
VTI1B-202ENST00000553619 ZNF93P35789 620 aaPredicted RBP4.29□□□□□ -1.72
VTI1B-202ENST00000553619 TALDO1P37837 337 aa4.29□□□□□ -1.72
VTI1B-202ENST00000553619 WNT5AP41221 380 aa4.29□□□□□ -1.72
VTI1B-202ENST00000553619 KIR2DL3P43628 341 aa4.29□□□□□ -1.72
VTI1B-202ENST00000553619 EVX1P49640 407 aa4.29□□□□□ -1.72
VTI1B-202ENST00000553619 RBP2P50120 134 aa4.29□□□□□ -1.72
VTI1B-202ENST00000553619 FABP6P51161 128 aa4.29□□□□□ -1.72
VTI1B-202ENST00000553619 MTCP1P56278 107 aa4.29□□□□□ -1.72
VTI1B-202ENST00000553619 ZNF45Q02386 682 aa4.29□□□□□ -1.72
VTI1B-202ENST00000553619 HNRNPA0Q13151 305 aaKnown RBP4.29□□□□□ -1.72
VTI1B-202ENST00000553619 GK2Q14410 553 aaPredicted RBP4.29□□□□□ -1.72
VTI1B-202ENST00000553619 NCMAPQ5T1S8 102 aa4.29□□□□□ -1.72
VTI1B-202ENST00000553619 DDI2Q5TDH0 399 aa4.29□□□□□ -1.72
VTI1B-202ENST00000553619 MBNL2Q5VZF2 373 aaKnown RBP4.29□□□□□ -1.72
VTI1B-202ENST00000553619 SFXN4Q6P4A7 337 aa4.29□□□□□ -1.72
VTI1B-202ENST00000553619 SLC22A25Q6T423 547 aa4.29□□□□□ -1.72
VTI1B-202ENST00000553619 METAP1DQ6UB28 335 aaPredicted RBP4.29□□□□□ -1.72
VTI1B-202ENST00000553619 MKXQ8IYA7 352 aa4.29□□□□□ -1.72
VTI1B-202ENST00000553619 JAGN1Q8N5M9 183 aa4.29□□□□□ -1.72
VTI1B-202ENST00000553619 NUP37Q8NFH4 326 aa4.29□□□□□ -1.72
VTI1B-202ENST00000553619 OR8G5Q8NG78 346 aa4.29□□□□□ -1.72
VTI1B-202ENST00000553619 OR6M1Q8NGM8 313 aa4.29□□□□□ -1.72
VTI1B-202ENST00000553619 OR13G1Q8NGZ3 307 aa4.29□□□□□ -1.72
VTI1B-202ENST00000553619 OR10AC1Q8NH08 325 aa4.29□□□□□ -1.72
VTI1B-202ENST00000553619 OR8S1Q8NH09 359 aa4.29□□□□□ -1.72
VTI1B-202ENST00000553619 OR2AE1Q8NHA4 323 aa4.29□□□□□ -1.72
VTI1B-202ENST00000553619 ZNF671Q8TAW3 534 aa4.29□□□□□ -1.72
VTI1B-202ENST00000553619 SLC25A40Q8TBP6 338 aa4.29□□□□□ -1.72
VTI1B-202ENST00000553619 KLF14Q8TD94 323 aaPredicted RBP4.29□□□□□ -1.72
VTI1B-202ENST00000553619 ITLN2Q8WWU7 325 aaPredicted RBP4.29□□□□□ -1.72
VTI1B-202ENST00000553619 RGP1Q92546 391 aaPredicted RBP4.29□□□□□ -1.72
VTI1B-202ENST00000553619 S100A16Q96FQ6 103 aaKnown RBP4.29□□□□□ -1.72
VTI1B-202ENST00000553619 TRMT61AQ96FX7 289 aaKnown RBP4.29□□□□□ -1.72
VTI1B-202ENST00000553619 MARS2Q96GW9 593 aaKnown RBP4.29□□□□□ -1.72
VTI1B-202ENST00000553619 LYZL4Q96KX0 146 aa4.29□□□□□ -1.72
VTI1B-202ENST00000553619 MICU1Q9BPX6 476 aa4.29□□□□□ -1.72
VTI1B-202ENST00000553619 OR2J1Q9GZK6 312 aa4.29□□□□□ -1.72
VTI1B-202ENST00000553619 CHST5Q9GZS9 411 aa4.29□□□□□ -1.72
VTI1B-202ENST00000553619 C6orf62Q9GZU0 229 aaPredicted RBP4.29□□□□□ -1.72
VTI1B-202ENST00000553619 NXF2Q9GZY0 626 aaKnown RBP4.29□□□□□ -1.72
VTI1B-202ENST00000553619 RHOFQ9HBH0 211 aa4.29□□□□□ -1.72
VTI1B-202ENST00000553619 NOX3Q9HBY0 568 aa4.29□□□□□ -1.72
VTI1B-202ENST00000553619 TMEM100Q9NV29 134 aa4.29□□□□□ -1.72
VTI1B-202ENST00000553619 C14orf119Q9NWQ9 140 aa4.29□□□□□ -1.72
VTI1B-202ENST00000553619 TAS2R4Q9NYW5 299 aa4.29□□□□□ -1.72
VTI1B-202ENST00000553619 MRPL15Q9P015 296 aaKnown RBP4.29□□□□□ -1.72
VTI1B-202ENST00000553619 POU2F3Q9UKI9 436 aa4.29□□□□□ -1.72
VTI1B-202ENST00000553619 SPATA2Q9UM82 520 aa4.29□□□□□ -1.72
VTI1B-202ENST00000553619 KLF2Q9Y5W3 355 aaPredicted RBP4.29□□□□□ -1.72
VTI1B-202ENST00000553619 ANKRD11Q6UB99 2663 aaPredicted RBP4.29□□□□□ -1.72
VTI1B-202ENST00000553619 HCFC1P51610 2035 aa4.29□□□□□ -1.72
VTI1B-202ENST00000553619 AKAP13Q12802 2813 aa4.29□□□□□ -1.72
VTI1B-202ENST00000553619 EPG5Q9HCE0 2579 aa4.28□□□□□ -1.72
VTI1B-202ENST00000553619 WDFY3Q8IZQ1 3526 aa4.28□□□□□ -1.72
VTI1B-202ENST00000553619 PLSCR5A0PG75 271 aa4.28□□□□□ -1.72
VTI1B-202ENST00000553619 DPRXA6NFQ7 191 aa4.28□□□□□ -1.72
VTI1B-202ENST00000553619 OR5B21A6NL26 309 aa4.28□□□□□ -1.72
VTI1B-202ENST00000553619 ZNF850A8MQ14 1090 aa4.28□□□□□ -1.72
VTI1B-202ENST00000553619 FAM25AB3EWG3 89 aa4.28□□□□□ -1.72
VTI1B-202ENST00000553619 FAM25CB3EWG5 89 aa4.28□□□□□ -1.72
VTI1B-202ENST00000553619 FAM25GB3EWG6 89 aa4.28□□□□□ -1.72
VTI1B-202ENST00000553619 SLC17A2O00624 439 aa4.28□□□□□ -1.72
VTI1B-202ENST00000553619 TIMM8AO60220 97 aaPredicted RBP4.28□□□□□ -1.72
VTI1B-202ENST00000553619 ZG16O60844 167 aa4.28□□□□□ -1.72
VTI1B-202ENST00000553619 SCGNO76038 276 aa4.28□□□□□ -1.72
VTI1B-202ENST00000553619 IGHV3-13P01766 116 aa4.28□□□□□ -1.72
VTI1B-202ENST00000553619 CSTBP04080 98 aaKnown RBP4.28□□□□□ -1.72
VTI1B-202ENST00000553619 CLEC2LP0C7M8 214 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms