RNA–Protein interactions for RNA: ENST00000553544.1

SRP54-203, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 491 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-203ENST00000553544 TMED1Q13445 227 aa9.72□□□□□ -0.85
SRP54-203ENST00000553544 SAMD5Q5TGI4 173 aa9.72□□□□□ -0.85
SRP54-203ENST00000553544 DHRS7BQ6IAN0 325 aaPredicted RBP9.72□□□□□ -0.85
SRP54-203ENST00000553544 ZBTB49Q6ZSB9 765 aa9.72□□□□□ -0.85
SRP54-203ENST00000553544 LDLRAD3Q86YD5 345 aa9.72□□□□□ -0.85
SRP54-203ENST00000553544 FTMTQ8N4E7 242 aa9.72□□□□□ -0.85
SRP54-203ENST00000553544 BOLLQ8N9W6 283 aaKnown RBP9.72□□□□□ -0.85
SRP54-203ENST00000553544 OR8J1Q8NGP2 316 aa9.72□□□□□ -0.85
SRP54-203ENST00000553544 MRAPQ8TCY5 172 aa9.72□□□□□ -0.85
SRP54-203ENST00000553544 TRUB1Q8WWH5 349 aaKnown RBP9.72□□□□□ -0.85
SRP54-203ENST00000553544 HPSE2Q8WWQ2 592 aa9.72□□□□□ -0.85
SRP54-203ENST00000553544 ASB17Q8WXJ9 295 aa9.72□□□□□ -0.85
SRP54-203ENST00000553544 OR5P3Q8WZ94 311 aa9.72□□□□□ -0.85
SRP54-203ENST00000553544 TECTBQ96PL2 329 aa9.72□□□□□ -0.85
SRP54-203ENST00000553544 CNN2Q99439 309 aaKnown RBP9.72□□□□□ -0.85
SRP54-203ENST00000553544 PAPOLGQ9BWT3 736 aaKnown RBP9.72□□□□□ -0.85
SRP54-203ENST00000553544 VCXQ9H320 206 aa9.72□□□□□ -0.85
SRP54-203ENST00000553544 ADGRL4Q9HBW9 690 aa9.72□□□□□ -0.85
SRP54-203ENST00000553544 SMURF1Q9HCE7 757 aa9.72□□□□□ -0.85
SRP54-203ENST00000553544 ABCB9Q9NP78 766 aa9.72□□□□□ -0.85
SRP54-203ENST00000553544 A0A0U1RQK1 487 aa9.71□□□□□ -0.86
SRP54-203ENST00000553544 hCG_1807616A0A1W2PRN6 198 aa9.71□□□□□ -0.86
SRP54-203ENST00000553544 BTBD17A6NE02 478 aa9.71□□□□□ -0.86
SRP54-203ENST00000553544 TMEM210A6NLX4 147 aa9.71□□□□□ -0.86
SRP54-203ENST00000553544 ANXA2P2A6NMY6 339 aa9.71□□□□□ -0.86
SRP54-203ENST00000553544 ZNF850A8MQ14 1090 aa9.71□□□□□ -0.86
SRP54-203ENST00000553544 EI24O14681 340 aa9.71□□□□□ -0.86
SRP54-203ENST00000553544 CDIPTO14735 213 aa9.71□□□□□ -0.86
SRP54-203ENST00000553544 ADAM20O43506 726 aa9.71□□□□□ -0.86
SRP54-203ENST00000553544 MPZL2O60487 215 aa9.71□□□□□ -0.86
SRP54-203ENST00000553544 BAG2O95816 211 aa9.71□□□□□ -0.86
SRP54-203ENST00000553544 GYPAP02724 150 aa9.71□□□□□ -0.86
SRP54-203ENST00000553544 ATP6V1B1P15313 513 aa9.71□□□□□ -0.86
SRP54-203ENST00000553544 GNALP38405 381 aa9.71□□□□□ -0.86
SRP54-203ENST00000553544 EGR3Q06889 387 aa9.71□□□□□ -0.86
SRP54-203ENST00000553544 C11orf91Q3C1V1 193 aa9.71□□□□□ -0.86
SRP54-203ENST00000553544 Q6ZTK2 550 aa9.71□□□□□ -0.86
SRP54-203ENST00000553544 LRRC29Q8WV35 223 aa9.71□□□□□ -0.86
SRP54-203ENST00000553544 IL4I1Q96RQ9 567 aa9.71□□□□□ -0.86
SRP54-203ENST00000553544 MICU1Q9BPX6 476 aa9.71□□□□□ -0.86
SRP54-203ENST00000553544 RTL8AQ9BWD3 113 aa9.71□□□□□ -0.86
SRP54-203ENST00000553544 PBOV1Q9GZY1 135 aa9.71□□□□□ -0.86
SRP54-203ENST00000553544 NUFIP1Q9UHK0 495 aaKnown RBP9.71□□□□□ -0.86
SRP54-203ENST00000553544 GPR37O15354 613 aa9.7□□□□□ -0.86
SRP54-203ENST00000553544 TTRP02766 147 aa9.7□□□□□ -0.86
SRP54-203ENST00000553544 AMY2BP19961 511 aa9.7□□□□□ -0.86
SRP54-203ENST00000553544 MAP2K3P46734 347 aa9.7□□□□□ -0.86
SRP54-203ENST00000553544 RIDAP52758 137 aaKnown RBP9.7□□□□□ -0.86
SRP54-203ENST00000553544 CXCR4P61073 352 aa9.7□□□□□ -0.86
SRP54-203ENST00000553544 ARF6P62330 175 aa9.7□□□□□ -0.86
SRP54-203ENST00000553544 MFGE8Q08431 387 aaPredicted RBP9.7□□□□□ -0.86
SRP54-203ENST00000553544 HERPUD1Q15011 391 aa9.7□□□□□ -0.86
SRP54-203ENST00000553544 MICBQ29980 383 aa9.7□□□□□ -0.86
SRP54-203ENST00000553544 VAX1Q5SQQ9 334 aa9.7□□□□□ -0.86
SRP54-203ENST00000553544 ATPAF1Q5TC12 328 aaPredicted RBP9.7□□□□□ -0.86
SRP54-203ENST00000553544 MEDAGQ5VYS4 303 aa9.7□□□□□ -0.86
SRP54-203ENST00000553544 SLC35E4Q6ICL7 350 aa9.7□□□□□ -0.86
SRP54-203ENST00000553544 ZNF322Q6U7Q0 402 aaPredicted RBP9.7□□□□□ -0.86
SRP54-203ENST00000553544 SLC35F2Q8IXU6 374 aa9.7□□□□□ -0.86
SRP54-203ENST00000553544 CBR4Q8N4T8 237 aa9.7□□□□□ -0.86
SRP54-203ENST00000553544 OR10Z1Q8NGY1 313 aa9.7□□□□□ -0.86
SRP54-203ENST00000553544 NPRL2Q8WTW4 380 aa9.7□□□□□ -0.86
SRP54-203ENST00000553544 PIGCQ92535 297 aa9.7□□□□□ -0.86
SRP54-203ENST00000553544 C12orf43Q96C57 262 aaKnown RBP9.7□□□□□ -0.86
SRP54-203ENST00000553544 RNF170Q96K19 258 aa9.7□□□□□ -0.86
SRP54-203ENST00000553544 RASSF4Q9H2L5 321 aa9.7□□□□□ -0.86
SRP54-203ENST00000553544 CLN6Q9NWW5 311 aa9.7□□□□□ -0.86
SRP54-203ENST00000553544 WARS2Q9UGM6 360 aaKnown RBP9.7□□□□□ -0.86
SRP54-203ENST00000553544 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.7□□□□□ -0.86
SRP54-203ENST00000553544 CAB39Q9Y376 341 aaPredicted RBP9.7□□□□□ -0.86
SRP54-203ENST00000553544 KMT2CQ8NEZ4 4911 aaKnown RBP9.7□□□□□ -0.86
SRP54-203ENST00000553544 IGHV3OR15-7A0A075B7D8 119 aa9.69□□□□□ -0.86
SRP54-203ENST00000553544 ANKRD61A6NGH8 418 aa9.69□□□□□ -0.86
SRP54-203ENST00000553544 E9PQ18 207 aa9.69□□□□□ -0.86
SRP54-203ENST00000553544 DVL1O14640 695 aa9.69□□□□□ -0.86
SRP54-203ENST00000553544 MAGEB4O15481 346 aaPredicted RBP9.69□□□□□ -0.86
SRP54-203ENST00000553544 ECDO95905 644 aaPredicted RBP9.69□□□□□ -0.86
SRP54-203ENST00000553544 HTR1FP30939 366 aa9.69□□□□□ -0.86
SRP54-203ENST00000553544 TGM4P49221 684 aa9.69□□□□□ -0.86
SRP54-203ENST00000553544 ELF3P78545 371 aaPredicted RBP9.69□□□□□ -0.86
SRP54-203ENST00000553544 ZNF829Q3KNS6 432 aaPredicted RBP9.69□□□□□ -0.86
SRP54-203ENST00000553544 CEACAM21Q3KPI0 293 aa9.69□□□□□ -0.86
SRP54-203ENST00000553544 WDR38Q5JTN6 314 aa9.69□□□□□ -0.86
SRP54-203ENST00000553544 ZBTB37Q5TC79 503 aa9.69□□□□□ -0.86
SRP54-203ENST00000553544 STUMQ69YW2 141 aa9.69□□□□□ -0.86
SRP54-203ENST00000553544 Q6ZSR3 168 aa9.69□□□□□ -0.86
SRP54-203ENST00000553544 PDZD9Q8IXQ8 264 aa9.69□□□□□ -0.86
SRP54-203ENST00000553544 ZDHHC23Q8IYP9 409 aa9.69□□□□□ -0.86
SRP54-203ENST00000553544 PACRGLQ8N7B6 248 aa9.69□□□□□ -0.86
SRP54-203ENST00000553544 ZNF555Q8NEP9 628 aa9.69□□□□□ -0.86
SRP54-203ENST00000553544 FAM81AQ8TBF8 368 aa9.69□□□□□ -0.86
SRP54-203ENST00000553544 OR51E1Q8TCB6 317 aa9.69□□□□□ -0.86
SRP54-203ENST00000553544 DSCAML1Q8TD84 2053 aa9.69□□□□□ -0.86
SRP54-203ENST00000553544 RPL3LQ92901 407 aaKnown RBP9.69□□□□□ -0.86
SRP54-203ENST00000553544 SEH1LQ96EE3 360 aa9.69□□□□□ -0.86
SRP54-203ENST00000553544 MRPL48Q96GC5 212 aaKnown RBP9.69□□□□□ -0.86
SRP54-203ENST00000553544 HRASLS5Q96KN8 279 aa9.69□□□□□ -0.86
SRP54-203ENST00000553544 Q96MT0 163 aa9.69□□□□□ -0.86
SRP54-203ENST00000553544 CCL13Q99616 98 aa9.69□□□□□ -0.86
SRP54-203ENST00000553544 APOL4Q9BPW4 351 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms