RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 TMA7Q9Y2S6 64 aaKnown RBP11.3□□□□□ -0.6
SHMT2-205ENST00000553474 SPTBN2O15020 2390 aa11.3□□□□□ -0.6
SHMT2-205ENST00000553474 MED12Q93074 2177 aa11.29□□□□□ -0.6
SHMT2-205ENST00000553474 OR5H15A6NDH6 313 aa11.29□□□□□ -0.6
SHMT2-205ENST00000553474 FAM25EA8MYX2 175 aa11.29□□□□□ -0.6
SHMT2-205ENST00000553474 E9PLN8 166 aa11.29□□□□□ -0.6
SHMT2-205ENST00000553474 TM4SF5O14894 197 aa11.29□□□□□ -0.6
SHMT2-205ENST00000553474 SYNGR3O43761 229 aa11.29□□□□□ -0.6
SHMT2-205ENST00000553474 ATP1B3P54709 279 aa11.29□□□□□ -0.6
SHMT2-205ENST00000553474 SNU13P55769 128 aaKnown RBP11.29□□□□□ -0.6
SHMT2-205ENST00000553474 CARD18P57730 90 aa11.29□□□□□ -0.6
SHMT2-205ENST00000553474 HYAL4Q2M3T9 481 aa11.29□□□□□ -0.6
SHMT2-205ENST00000553474 KRTAP27-1Q3LI81 207 aa11.29□□□□□ -0.6
SHMT2-205ENST00000553474 ABLIM2Q6H8Q1 611 aa11.29□□□□□ -0.6
SHMT2-205ENST00000553474 CCDC36Q8IYA8 594 aa11.29□□□□□ -0.6
SHMT2-205ENST00000553474 LRRC18Q8N456 261 aa11.29□□□□□ -0.6
SHMT2-205ENST00000553474 CASTOR1Q8WTX7 329 aa11.29□□□□□ -0.6
SHMT2-205ENST00000553474 FBXO17Q96EF6 278 aa11.29□□□□□ -0.6
SHMT2-205ENST00000553474 CXorf58Q96LI9 332 aa11.29□□□□□ -0.6
SHMT2-205ENST00000553474 PECRQ9BY49 303 aa11.29□□□□□ -0.6
SHMT2-205ENST00000553474 ATPIF1Q9UII2 106 aa11.29□□□□□ -0.6
SHMT2-205ENST00000553474 TCFL5Q9UL49 500 aa11.29□□□□□ -0.6
SHMT2-205ENST00000553474 OSGIN2Q9Y236 505 aa11.29□□□□□ -0.6
SHMT2-205ENST00000553474 IGHV3-15A0A0B4J1V0 119 aa11.28□□□□□ -0.6
SHMT2-205ENST00000553474 TEX13DA0A0J9YY54 714 aaPredicted RBP11.28□□□□□ -0.6
SHMT2-205ENST00000553474 C5orf51A6NDU8 294 aa11.28□□□□□ -0.6
SHMT2-205ENST00000553474 ZNF716A6NP11 495 aa11.28□□□□□ -0.6
SHMT2-205ENST00000553474 CCSO14618 274 aa11.28□□□□□ -0.6
SHMT2-205ENST00000553474 RAD51DO75771 328 aa11.28□□□□□ -0.6
SHMT2-205ENST00000553474 LYL1P12980 280 aa11.28□□□□□ -0.6
SHMT2-205ENST00000553474 FAHP16930 419 aa11.28□□□□□ -0.6
SHMT2-205ENST00000553474 STK11Q15831 433 aa11.28□□□□□ -0.6
SHMT2-205ENST00000553474 PAN3Q58A45 887 aaKnown RBP11.28□□□□□ -0.6
SHMT2-205ENST00000553474 PDSS1Q5T2R2 415 aa11.28□□□□□ -0.6
SHMT2-205ENST00000553474 PLXDC2Q6UX71 529 aa11.28□□□□□ -0.6
SHMT2-205ENST00000553474 RNF144BQ7Z419 303 aa11.28□□□□□ -0.6
SHMT2-205ENST00000553474 PPP1R32Q7Z5V6 425 aa11.28□□□□□ -0.6
SHMT2-205ENST00000553474 OR14L1PQ8NHC6 308 aa11.28□□□□□ -0.6
SHMT2-205ENST00000553474 CPNE4Q96A23 557 aaPredicted RBP11.28□□□□□ -0.6
SHMT2-205ENST00000553474 MRPS24Q96EL2 167 aaKnown RBP11.28□□□□□ -0.6
SHMT2-205ENST00000553474 SEC22AQ96IW7 307 aa11.28□□□□□ -0.6
SHMT2-205ENST00000553474 Q96M66 194 aa11.28□□□□□ -0.6
SHMT2-205ENST00000553474 SRXN1Q9BYN0 137 aa11.28□□□□□ -0.6
SHMT2-205ENST00000553474 FAM117AQ9C073 453 aa11.28□□□□□ -0.6
SHMT2-205ENST00000553474 METTL9Q9H1A3 318 aa11.28□□□□□ -0.6
SHMT2-205ENST00000553474 PCDHB16Q9NRJ7 776 aa11.28□□□□□ -0.6
SHMT2-205ENST00000553474 TMEM38BQ9NVV0 291 aa11.28□□□□□ -0.6
SHMT2-205ENST00000553474 A0A1W2PP11 408 aa11.28□□□□□ -0.6
SHMT2-205ENST00000553474 OR6C6A6NF89 314 aa11.28□□□□□ -0.6
SHMT2-205ENST00000553474 SERPINA7P05543 415 aa11.28□□□□□ -0.6
SHMT2-205ENST00000553474 LIPCP11150 499 aa11.28□□□□□ -0.6
SHMT2-205ENST00000553474 TAGLNQ01995 201 aaKnown RBP11.28□□□□□ -0.6
SHMT2-205ENST00000553474 CHRFAM7AQ494W8 412 aa11.28□□□□□ -0.6
SHMT2-205ENST00000553474 AADACL3Q5VUY0 350 aa11.28□□□□□ -0.6
SHMT2-205ENST00000553474 C6orf15Q6UXA7 325 aaPredicted RBP11.28□□□□□ -0.6
SHMT2-205ENST00000553474 CLEC18BQ6UXF7 455 aa11.28□□□□□ -0.6
SHMT2-205ENST00000553474 LHFPL2Q6ZUX7 228 aa11.28□□□□□ -0.6
SHMT2-205ENST00000553474 KCTD9Q7L273 389 aa11.28□□□□□ -0.6
SHMT2-205ENST00000553474 GGNQ86UU5 652 aa11.28□□□□□ -0.6
SHMT2-205ENST00000553474 STPG2Q8N412 459 aa11.28□□□□□ -0.6
SHMT2-205ENST00000553474 GALNT11Q8NCW6 608 aa11.28□□□□□ -0.6
SHMT2-205ENST00000553474 CSNK2A3Q8NEV1 391 aa11.28□□□□□ -0.6
SHMT2-205ENST00000553474 OR1F12Q8NHA8 337 aa11.28□□□□□ -0.6
SHMT2-205ENST00000553474 TMEM230Q96A57 120 aa11.28□□□□□ -0.6
SHMT2-205ENST00000553474 SGK3Q96BR1 496 aa11.28□□□□□ -0.6
SHMT2-205ENST00000553474 CCDC120Q96HB5 630 aa11.28□□□□□ -0.6
SHMT2-205ENST00000553474 ADGRG7Q96K78 797 aa11.28□□□□□ -0.6
SHMT2-205ENST00000553474 ZNF471Q9BX82 626 aaPredicted RBP11.28□□□□□ -0.6
SHMT2-205ENST00000553474 SHARPINQ9H0F6 387 aa11.28□□□□□ -0.6
SHMT2-205ENST00000553474 DECR2Q9NUI1 292 aa11.28□□□□□ -0.6
SHMT2-205ENST00000553474 MEMO1Q9Y316 297 aa11.28□□□□□ -0.6
SHMT2-205ENST00000553474 SPEF1Q9Y4P9 236 aa11.28□□□□□ -0.6
SHMT2-205ENST00000553474 TIMM10BQ9Y5J6 103 aa11.28□□□□□ -0.6
SHMT2-205ENST00000553474 F8VVB4 439 aa11.27□□□□□ -0.61
SHMT2-205ENST00000553474 F8VWA3 439 aa11.27□□□□□ -0.61
SHMT2-205ENST00000553474 MT-CO3P00414 261 aa11.27□□□□□ -0.61
SHMT2-205ENST00000553474 HPNP05981 417 aa11.27□□□□□ -0.61
SHMT2-205ENST00000553474 SERPINA2P20848 420 aa11.27□□□□□ -0.61
SHMT2-205ENST00000553474 ANOS1P23352 680 aa11.27□□□□□ -0.61
SHMT2-205ENST00000553474 DTYMKP23919 212 aa11.27□□□□□ -0.61
SHMT2-205ENST00000553474 SERPINF1P36955 418 aa11.27□□□□□ -0.61
SHMT2-205ENST00000553474 LUMP51884 338 aaPredicted RBP11.27□□□□□ -0.61
SHMT2-205ENST00000553474 SNTB1Q13884 538 aaKnown RBP11.27□□□□□ -0.61
SHMT2-205ENST00000553474 LRRC37A5PQ49AS3 106 aa11.27□□□□□ -0.61
SHMT2-205ENST00000553474 ACER2Q5QJU3 275 aa11.27□□□□□ -0.61
SHMT2-205ENST00000553474 TMEM42Q69YG0 159 aa11.27□□□□□ -0.61
SHMT2-205ENST00000553474 UQCC3Q6UW78 93 aa11.27□□□□□ -0.61
SHMT2-205ENST00000553474 ASCL4Q6XD76 172 aa11.27□□□□□ -0.61
SHMT2-205ENST00000553474 AAED1Q7RTV5 226 aa11.27□□□□□ -0.61
SHMT2-205ENST00000553474 OR10K1Q8NGX5 313 aa11.27□□□□□ -0.61
SHMT2-205ENST00000553474 OR2V1Q8NHB1 315 aa11.27□□□□□ -0.61
SHMT2-205ENST00000553474 RTBDNQ9BSG5 229 aaPredicted RBP11.27□□□□□ -0.61
SHMT2-205ENST00000553474 ST6GALNAC5Q9BVH7 336 aa11.27□□□□□ -0.61
SHMT2-205ENST00000553474 DDA1Q9BW61 102 aa11.27□□□□□ -0.61
SHMT2-205ENST00000553474 STRADBQ9C0K7 418 aa11.27□□□□□ -0.61
SHMT2-205ENST00000553474 PLEKHJ1Q9NW61 149 aa11.27□□□□□ -0.61
SHMT2-205ENST00000553474 EHFQ9NZC4 300 aa11.27□□□□□ -0.61
SHMT2-205ENST00000553474 IL36GQ9NZH8 169 aa11.27□□□□□ -0.61
SHMT2-205ENST00000553474 MBD2Q9UBB5 411 aa11.27□□□□□ -0.61
SHMT2-205ENST00000553474 DNAJB11Q9UBS4 358 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms