RNA–Protein interactions for RNA: ENST00000553256.5

PTCH1-227, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-227ENST00000553256 OR2G2Q8NGZ5 317 aa15.95■□□□□ 0.14
PTCH1-227ENST00000553256 ZFAND2BQ8WV99 257 aa15.95■□□□□ 0.14
PTCH1-227ENST00000553256 PELI1Q96FA3 418 aa15.95■□□□□ 0.14
PTCH1-227ENST00000553256 C1orf147Q96MC9 270 aaPredicted RBP15.95■□□□□ 0.14
PTCH1-227ENST00000553256 ZNF48Q96MX3 618 aaPredicted RBP15.95■□□□□ 0.14
PTCH1-227ENST00000553256 GAFA1Q96PS6 74 aa15.95■□□□□ 0.14
PTCH1-227ENST00000553256 MRI1Q9BV20 369 aa15.95■□□□□ 0.14
PTCH1-227ENST00000553256 FRRS1LQ9P0K9 344 aa15.95■□□□□ 0.14
PTCH1-227ENST00000553256 SOX21Q9Y651 276 aaPredicted RBP15.95■□□□□ 0.14
PTCH1-227ENST00000553256 IGKV1D-17A0A075B6S4 117 aa15.94■□□□□ 0.14
PTCH1-227ENST00000553256 A6NIN4 97 aa15.94■□□□□ 0.14
PTCH1-227ENST00000553256 TMPRSS2O15393 492 aa15.94■□□□□ 0.14
PTCH1-227ENST00000553256 ENSAO43768 121 aaKnown RBP15.94■□□□□ 0.14
PTCH1-227ENST00000553256 MPZL2O60487 215 aa15.94■□□□□ 0.14
PTCH1-227ENST00000553256 BAG2O95816 211 aa15.94■□□□□ 0.14
PTCH1-227ENST00000553256 TFF1P04155 84 aa15.94■□□□□ 0.14
PTCH1-227ENST00000553256 ISG15P05161 165 aa15.94■□□□□ 0.14
PTCH1-227ENST00000553256 SELLP14151 372 aa15.94■□□□□ 0.14
PTCH1-227ENST00000553256 ATP6V1E1P36543 226 aa15.94■□□□□ 0.14
PTCH1-227ENST00000553256 SCGB2A2Q13296 93 aa15.94■□□□□ 0.14
PTCH1-227ENST00000553256 UBE2V2Q15819 145 aa15.94■□□□□ 0.14
PTCH1-227ENST00000553256 PLCXD3Q63HM9 321 aa15.94■□□□□ 0.14
PTCH1-227ENST00000553256 BTNL3Q6UXE8 466 aa15.94■□□□□ 0.14
PTCH1-227ENST00000553256 THAP5Q7Z6K1 395 aa15.94■□□□□ 0.14
PTCH1-227ENST00000553256 COMMD2Q86X83 199 aa15.94■□□□□ 0.14
PTCH1-227ENST00000553256 EGFL6Q8IUX8 553 aa15.94■□□□□ 0.14
PTCH1-227ENST00000553256 RDH10Q8IZV5 341 aa15.94■□□□□ 0.14
PTCH1-227ENST00000553256 TECTBQ96PL2 329 aa15.94■□□□□ 0.14
PTCH1-227ENST00000553256 TBX15Q96SF7 602 aa15.94■□□□□ 0.14
PTCH1-227ENST00000553256 JAM3Q9BX67 310 aa15.94■□□□□ 0.14
PTCH1-227ENST00000553256 SIRPDQ9H106 197 aa15.94■□□□□ 0.14
PTCH1-227ENST00000553256 HES4Q9HCC6 221 aa15.94■□□□□ 0.14
PTCH1-227ENST00000553256 AMBNQ9NP70 447 aa15.94■□□□□ 0.14
PTCH1-227ENST00000553256 GPR173Q9NS66 373 aa15.94■□□□□ 0.14
PTCH1-227ENST00000553256 GNG8Q9UK08 70 aa15.94■□□□□ 0.14
PTCH1-227ENST00000553256 GTF2A1LQ9UNN4 478 aa15.94■□□□□ 0.14
PTCH1-227ENST00000553256 IGKV1-27A0A075B6S5 117 aa15.93■□□□□ 0.14
PTCH1-227ENST00000553256 OR4C45A6NMZ5 311 aa15.93■□□□□ 0.14
PTCH1-227ENST00000553256 CASQ2O14958 399 aaPredicted RBP15.93■□□□□ 0.14
PTCH1-227ENST00000553256 SYNGR1O43759 233 aa15.93■□□□□ 0.14
PTCH1-227ENST00000553256 ACAA1P09110 424 aaPredicted RBP15.93■□□□□ 0.14
PTCH1-227ENST00000553256 PGA5P0DJD9 388 aa15.93■□□□□ 0.14
PTCH1-227ENST00000553256 PEX2P28328 305 aa15.93■□□□□ 0.14
PTCH1-227ENST00000553256 CCR9P51686 369 aa15.93■□□□□ 0.14
PTCH1-227ENST00000553256 FGF12P61328 243 aa15.93■□□□□ 0.14
PTCH1-227ENST00000553256 ERVK11-1P61568 191 aa15.93■□□□□ 0.14
PTCH1-227ENST00000553256 ADARB1P78563 741 aaKnown RBP15.93■□□□□ 0.14
PTCH1-227ENST00000553256 SMN1Q16637 294 aaKnown RBP15.93■□□□□ 0.14
PTCH1-227ENST00000553256 DGUOKQ16854 277 aa15.93■□□□□ 0.14
PTCH1-227ENST00000553256 CD276Q5ZPR3 534 aa15.93■□□□□ 0.14
PTCH1-227ENST00000553256 LPCAT4Q643R3 524 aa15.93■□□□□ 0.14
PTCH1-227ENST00000553256 HAGHLQ6PII5 290 aaPredicted RBP15.93■□□□□ 0.14
PTCH1-227ENST00000553256 BTN2A1Q7KYR7 527 aa15.93■□□□□ 0.14
PTCH1-227ENST00000553256 CALHM1Q8IU99 346 aa15.93■□□□□ 0.14
PTCH1-227ENST00000553256 POC1AQ8NBT0 407 aa15.93■□□□□ 0.14
PTCH1-227ENST00000553256 CCDC54Q8NEL0 328 aa15.93■□□□□ 0.14
PTCH1-227ENST00000553256 OR5T2Q8NGG2 359 aa15.93■□□□□ 0.14
PTCH1-227ENST00000553256 C8orf46Q8TAG6 207 aa15.93■□□□□ 0.14
PTCH1-227ENST00000553256 C22orf15Q8WYQ4 148 aa15.93■□□□□ 0.14
PTCH1-227ENST00000553256 HIST1H2AAQ96QV6 131 aa15.93■□□□□ 0.14
PTCH1-227ENST00000553256 CHST5Q9GZS9 411 aa15.93■□□□□ 0.14
PTCH1-227ENST00000553256 PRDM13Q9H4Q3 707 aa15.93■□□□□ 0.14
PTCH1-227ENST00000553256 OCEL1Q9H607 264 aa15.93■□□□□ 0.14
PTCH1-227ENST00000553256 RPUSD1Q9UJJ7 312 aaKnown RBP15.93■□□□□ 0.14
PTCH1-227ENST00000553256 MAB21L2Q9Y586 359 aa15.93■□□□□ 0.14
PTCH1-227ENST00000553256 PCDHGB1Q9Y5G3 927 aa15.93■□□□□ 0.14
PTCH1-227ENST00000553256 LOC107986453A0A1B0GWG9 222 aa15.92■□□□□ 0.14
PTCH1-227ENST00000553256 DAPL1A0PJW8 107 aa15.92■□□□□ 0.14
PTCH1-227ENST00000553256 ZNF879B4DU55 563 aa15.92■□□□□ 0.14
PTCH1-227ENST00000553256 ANKRD65E5RJM6 399 aa15.92■□□□□ 0.14
PTCH1-227ENST00000553256 SIGLEC5O15389 551 aa15.92■□□□□ 0.14
PTCH1-227ENST00000553256 SYT7O43581 403 aa15.92■□□□□ 0.14
PTCH1-227ENST00000553256 LIPFP07098 398 aa15.92■□□□□ 0.14
PTCH1-227ENST00000553256 PSG2P11465 335 aa15.92■□□□□ 0.14
PTCH1-227ENST00000553256 RAB40BQ12829 278 aa15.92■□□□□ 0.14
PTCH1-227ENST00000553256 GALEQ14376 348 aa15.92■□□□□ 0.14
PTCH1-227ENST00000553256 RCN1Q15293 331 aa15.92■□□□□ 0.14
PTCH1-227ENST00000553256 ODF4Q2M2E3 257 aa15.92■□□□□ 0.14
PTCH1-227ENST00000553256 ZNF691Q5VV52 312 aa15.92■□□□□ 0.14
PTCH1-227ENST00000553256 KCTD8Q6ZWB6 473 aa15.92■□□□□ 0.14
PTCH1-227ENST00000553256 SYS1Q8N2H4 156 aa15.92■□□□□ 0.14
PTCH1-227ENST00000553256 PACRGLQ8N7B6 248 aa15.92■□□□□ 0.14
PTCH1-227ENST00000553256 OR52I1Q8NGK6 324 aa15.92■□□□□ 0.14
PTCH1-227ENST00000553256 C10orf35Q96D05 121 aa15.92■□□□□ 0.14
PTCH1-227ENST00000553256 SDSLQ96GA7 329 aa15.92■□□□□ 0.14
PTCH1-227ENST00000553256 DMRTB1Q96MA1 342 aa15.92■□□□□ 0.14
PTCH1-227ENST00000553256 NRIP2Q9BQI9 281 aa15.92■□□□□ 0.14
PTCH1-227ENST00000553256 ISG20L2Q9H9L3 353 aaKnown RBP15.92■□□□□ 0.14
PTCH1-227ENST00000553256 SNTG1Q9NSN8 517 aa15.92■□□□□ 0.14
PTCH1-227ENST00000553256 ERVK13-1Q9NX77 482 aa15.92■□□□□ 0.14
PTCH1-227ENST00000553256 NLKQ9UBE8 527 aa15.92■□□□□ 0.14
PTCH1-227ENST00000553256 IGKV1-9A0A0C4DH69 117 aa15.91■□□□□ 0.14
PTCH1-227ENST00000553256 ANKRD61A6NGH8 418 aa15.91■□□□□ 0.14
PTCH1-227ENST00000553256 J3QT63 122 aa15.91■□□□□ 0.14
PTCH1-227ENST00000553256 CLIC3O95833 236 aa15.91■□□□□ 0.14
PTCH1-227ENST00000553256 ECDO95905 644 aaPredicted RBP15.91■□□□□ 0.14
PTCH1-227ENST00000553256 SFTPBP07988 381 aa15.91■□□□□ 0.14
PTCH1-227ENST00000553256 UBCP0CG48 685 aaKnown RBP15.91■□□□□ 0.14
PTCH1-227ENST00000553256 LIMS3P0CW19 117 aa15.91■□□□□ 0.14
PTCH1-227ENST00000553256 LIMS4P0CW20 117 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms