RNA–Protein interactions for RNA: ENST00000552162.5

RAB5C-209, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 4

Gene RAB5C, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-209ENST00000552162 HIST1H2AAQ96QV6 131 aa13.17□□□□□ -0.3
RAB5C-209ENST00000552162 TSSK6Q9BXA6 273 aa13.17□□□□□ -0.3
RAB5C-209ENST00000552162 ABCB10Q9NRK6 738 aa13.17□□□□□ -0.3
RAB5C-209ENST00000552162 USE1Q9NZ43 259 aa13.17□□□□□ -0.3
RAB5C-209ENST00000552162 A6NDX4 124 aa13.16□□□□□ -0.3
RAB5C-209ENST00000552162 FAM90A8PA6NJQ4 464 aa13.16□□□□□ -0.3
RAB5C-209ENST00000552162 CCDC22O60826 627 aa13.16□□□□□ -0.3
RAB5C-209ENST00000552162 CCL3L1P16619 93 aa13.16□□□□□ -0.3
RAB5C-209ENST00000552162 TMEM95Q3KNT9 176 aa13.16□□□□□ -0.3
RAB5C-209ENST00000552162 TMEM200BQ69YZ2 307 aa13.16□□□□□ -0.3
RAB5C-209ENST00000552162 OR51I2Q9H344 312 aa13.16□□□□□ -0.3
RAB5C-209ENST00000552162 IL1RAPQ9NPH3 570 aa13.16□□□□□ -0.3
RAB5C-209ENST00000552162 MAGEL2Q9UJ55 1249 aa13.16□□□□□ -0.3
RAB5C-209ENST00000552162 PITPNC1Q9UKF7 332 aa13.16□□□□□ -0.3
RAB5C-209ENST00000552162 BAIAP2Q9UQB8 552 aa13.16□□□□□ -0.3
RAB5C-209ENST00000552162 LYVE1Q9Y5Y7 322 aa13.16□□□□□ -0.3
RAB5C-209ENST00000552162 DNAH9Q9NYC9 4486 aa13.16□□□□□ -0.3
RAB5C-209ENST00000552162 RIIAD1A6NNX1 92 aa13.15□□□□□ -0.3
RAB5C-209ENST00000552162 ZNF732B4DXR9 585 aa13.15□□□□□ -0.3
RAB5C-209ENST00000552162 MTRF1O75570 445 aaKnown RBP13.15□□□□□ -0.3
RAB5C-209ENST00000552162 GASTP01350 101 aa13.15□□□□□ -0.3
RAB5C-209ENST00000552162 IFNGP01579 166 aa13.15□□□□□ -0.3
RAB5C-209ENST00000552162 PF4V1P10720 104 aa13.15□□□□□ -0.3
RAB5C-209ENST00000552162 ZNF3P17036 446 aa13.15□□□□□ -0.3
RAB5C-209ENST00000552162 GSTT1P30711 240 aa13.15□□□□□ -0.3
RAB5C-209ENST00000552162 VDAC2P45880 294 aaPredicted RBP13.15□□□□□ -0.3
RAB5C-209ENST00000552162 GNG3P63215 75 aa13.15□□□□□ -0.3
RAB5C-209ENST00000552162 SLC35A2P78381 396 aa13.15□□□□□ -0.3
RAB5C-209ENST00000552162 ZNF273Q14593 569 aa13.15□□□□□ -0.3
RAB5C-209ENST00000552162 DEFB121Q5J5C9 76 aa13.15□□□□□ -0.3
RAB5C-209ENST00000552162 CEP78Q5JTW2 689 aa13.15□□□□□ -0.3
RAB5C-209ENST00000552162 Q6ZS46 218 aa13.15□□□□□ -0.3
RAB5C-209ENST00000552162 SHFQ7M4L6 423 aa13.15□□□□□ -0.3
RAB5C-209ENST00000552162 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.15□□□□□ -0.3
RAB5C-209ENST00000552162 LINC00471Q8N535 108 aa13.15□□□□□ -0.3
RAB5C-209ENST00000552162 CD177Q8N6Q3 437 aa13.15□□□□□ -0.3
RAB5C-209ENST00000552162 OR2T33Q8NG76 320 aa13.15□□□□□ -0.3
RAB5C-209ENST00000552162 OR4M1Q8NGD0 313 aa13.15□□□□□ -0.3
RAB5C-209ENST00000552162 OR8B12Q8NGG6 310 aa13.15□□□□□ -0.3
RAB5C-209ENST00000552162 ZNF671Q8TAW3 534 aa13.15□□□□□ -0.3
RAB5C-209ENST00000552162 AQP3Q92482 292 aa13.15□□□□□ -0.3
RAB5C-209ENST00000552162 FOXRED1Q96CU9 486 aaPredicted RBP13.15□□□□□ -0.3
RAB5C-209ENST00000552162 MED20Q9H944 212 aa13.15□□□□□ -0.3
RAB5C-209ENST00000552162 ARMC1Q9NVT9 282 aa13.15□□□□□ -0.3
RAB5C-209ENST00000552162 FAM183AA6NL82 134 aa13.14□□□□□ -0.31
RAB5C-209ENST00000552162 RFPL4AA6NLU0 287 aa13.14□□□□□ -0.31
RAB5C-209ENST00000552162 RFPL4AL1F8VTS6 287 aa13.14□□□□□ -0.31
RAB5C-209ENST00000552162 TNFRSF11BO00300 401 aa13.14□□□□□ -0.31
RAB5C-209ENST00000552162 SLC1A7O00341 560 aa13.14□□□□□ -0.31
RAB5C-209ENST00000552162 KRT36O76013 467 aa13.14□□□□□ -0.31
RAB5C-209ENST00000552162 SOX14O95416 240 aa13.14□□□□□ -0.31
RAB5C-209ENST00000552162 ALDOBP05062 364 aa13.14□□□□□ -0.31
RAB5C-209ENST00000552162 ARG1P05089 322 aa13.14□□□□□ -0.31
RAB5C-209ENST00000552162 MSX2P35548 267 aaPredicted RBP13.14□□□□□ -0.31
RAB5C-209ENST00000552162 CD83Q01151 205 aa13.14□□□□□ -0.31
RAB5C-209ENST00000552162 SMIM21Q3B7S5 101 aa13.14□□□□□ -0.31
RAB5C-209ENST00000552162 CEACAM21Q3KPI0 293 aa13.14□□□□□ -0.31
RAB5C-209ENST00000552162 SAMD4BQ5PRF9 694 aaKnown RBP13.14□□□□□ -0.31
RAB5C-209ENST00000552162 ZNF770Q6IQ21 691 aaPredicted RBP13.14□□□□□ -0.31
RAB5C-209ENST00000552162 HAGHLQ6PII5 290 aaPredicted RBP13.14□□□□□ -0.31
RAB5C-209ENST00000552162 ACP7Q6ZNF0 438 aa13.14□□□□□ -0.31
RAB5C-209ENST00000552162 ZNF561Q8N587 486 aa13.14□□□□□ -0.31
RAB5C-209ENST00000552162 OR2T27Q8NH04 317 aa13.14□□□□□ -0.31
RAB5C-209ENST00000552162 FAM81AQ8TBF8 368 aa13.14□□□□□ -0.31
RAB5C-209ENST00000552162 NSMCE2Q96MF7 247 aa13.14□□□□□ -0.31
RAB5C-209ENST00000552162 WWC2-AS2Q96NR7 200 aa13.14□□□□□ -0.31
RAB5C-209ENST00000552162 C1orf21Q9H246 121 aa13.14□□□□□ -0.31
RAB5C-209ENST00000552162 RASL12Q9NYN1 266 aa13.14□□□□□ -0.31
RAB5C-209ENST00000552162 TBL2Q9Y4P3 447 aaKnown RBP13.14□□□□□ -0.31
RAB5C-209ENST00000552162 WI2-2373I1.2A0A1W2PRP0 233 aa13.13□□□□□ -0.31
RAB5C-209ENST00000552162 ODF3BA8MYP8 253 aa13.13□□□□□ -0.31
RAB5C-209ENST00000552162 ARPC2O15144 300 aa13.13□□□□□ -0.31
RAB5C-209ENST00000552162 PF4P02776 101 aa13.13□□□□□ -0.31
RAB5C-209ENST00000552162 LYNP07948 512 aa13.13□□□□□ -0.31
RAB5C-209ENST00000552162 CEBPDP49716 269 aaPredicted RBP13.13□□□□□ -0.31
RAB5C-209ENST00000552162 HMGA2P52926 109 aa13.13□□□□□ -0.31
RAB5C-209ENST00000552162 KRTAP10-11P60412 298 aa13.13□□□□□ -0.31
RAB5C-209ENST00000552162 PSMA6P60900 246 aaKnown RBP13.13□□□□□ -0.31
RAB5C-209ENST00000552162 BLCAPP62952 87 aa13.13□□□□□ -0.31
RAB5C-209ENST00000552162 SSX2Q16385 188 aa13.13□□□□□ -0.31
RAB5C-209ENST00000552162 DMRTC1Q5HYR2 192 aa13.13□□□□□ -0.31
RAB5C-209ENST00000552162 AQP11Q8NBQ7 271 aa13.13□□□□□ -0.31
RAB5C-209ENST00000552162 OR5AU1Q8NGC0 362 aa13.13□□□□□ -0.31
RAB5C-209ENST00000552162 OTULINQ96BN8 352 aa13.13□□□□□ -0.31
RAB5C-209ENST00000552162 CMTM5Q96DZ9 223 aa13.13□□□□□ -0.31
RAB5C-209ENST00000552162 MALSU1Q96EH3 234 aa13.13□□□□□ -0.31
RAB5C-209ENST00000552162 RCC1LQ96I51 464 aaKnown RBP13.13□□□□□ -0.31
RAB5C-209ENST00000552162 MUC13Q9H3R2 512 aa13.13□□□□□ -0.31
RAB5C-209ENST00000552162 CMC2Q9NRP2 79 aa13.13□□□□□ -0.31
RAB5C-209ENST00000552162 OR5B21A6NL26 309 aa13.12□□□□□ -0.31
RAB5C-209ENST00000552162 F2RL2O00254 374 aa13.12□□□□□ -0.31
RAB5C-209ENST00000552162 CCNB2O95067 398 aa13.12□□□□□ -0.31
RAB5C-209ENST00000552162 PIPP12273 146 aaPredicted RBP13.12□□□□□ -0.31
RAB5C-209ENST00000552162 HSD17B1P14061 328 aa13.12□□□□□ -0.31
RAB5C-209ENST00000552162 MAP2K3P46734 347 aa13.12□□□□□ -0.31
RAB5C-209ENST00000552162 CD69Q07108 199 aa13.12□□□□□ -0.31
RAB5C-209ENST00000552162 LDLRAD2Q5SZI1 272 aa13.12□□□□□ -0.31
RAB5C-209ENST00000552162 POC1AQ8NBT0 407 aa13.12□□□□□ -0.31
RAB5C-209ENST00000552162 OR13D1Q8NGV5 346 aa13.12□□□□□ -0.31
RAB5C-209ENST00000552162 OTOSQ8NHW6 89 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms