RNA–Protein interactions for RNA: ENST00000552130.6

VPS29-210, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 1,057 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-210ENST00000552130 OR4F15Q8NGB8 312 aa5.02□□□□□ -1.61
VPS29-210ENST00000552130 AGAP11Q8TF27 550 aa5.02□□□□□ -1.61
VPS29-210ENST00000552130 TNFAIP8L1Q8WVP5 186 aa5.02□□□□□ -1.61
VPS29-210ENST00000552130 RDH5Q92781 318 aa5.02□□□□□ -1.61
VPS29-210ENST00000552130 UCN3Q969E3 161 aa5.02□□□□□ -1.61
VPS29-210ENST00000552130 TAPBPLQ9BX59 468 aa5.02□□□□□ -1.61
VPS29-210ENST00000552130 MIXL1Q9H2W2 232 aa5.02□□□□□ -1.61
VPS29-210ENST00000552130 VSIRQ9H7M9 311 aa5.02□□□□□ -1.61
VPS29-210ENST00000552130 NMNAT1Q9HAN9 279 aaPredicted RBP5.02□□□□□ -1.61
VPS29-210ENST00000552130 SIX2Q9NPC8 291 aa5.02□□□□□ -1.61
VPS29-210ENST00000552130 SLC7A10Q9NS82 523 aa5.02□□□□□ -1.61
VPS29-210ENST00000552130 DNAJC27Q9NZQ0 273 aa5.02□□□□□ -1.61
VPS29-210ENST00000552130 OR1A1Q9P1Q5 309 aa5.02□□□□□ -1.61
VPS29-210ENST00000552130 OR52A1Q9UKL2 312 aa5.02□□□□□ -1.61
VPS29-210ENST00000552130 TP53TG5Q9Y2B4 290 aa5.02□□□□□ -1.61
VPS29-210ENST00000552130 PRELID3BQ9Y3B1 194 aa5.02□□□□□ -1.61
VPS29-210ENST00000552130 SLC22A7Q9Y694 548 aa5.02□□□□□ -1.61
VPS29-210ENST00000552130 PHF3Q92576 2039 aaKnown RBP5.02□□□□□ -1.61
VPS29-210ENST00000552130 A0A1W2PP64 1363 aa5.02□□□□□ -1.61
VPS29-210ENST00000552130 RFX7Q2KHR2 1363 aa5.02□□□□□ -1.61
VPS29-210ENST00000552130 PLEKHG1Q9ULL1 1385 aa5.02□□□□□ -1.61
VPS29-210ENST00000552130 SCRIBQ14160 1630 aa5.01□□□□□ -1.61
VPS29-210ENST00000552130 K7ENP7 123 aa5.01□□□□□ -1.61
VPS29-210ENST00000552130 K7EQD1 137 aa5.01□□□□□ -1.61
VPS29-210ENST00000552130 TCAPO15273 167 aa5.01□□□□□ -1.61
VPS29-210ENST00000552130 S1PR2O95136 353 aa5.01□□□□□ -1.61
VPS29-210ENST00000552130 SEMA4FO95754 770 aa5.01□□□□□ -1.61
VPS29-210ENST00000552130 GLUD1P00367 558 aa5.01□□□□□ -1.61
VPS29-210ENST00000552130 CYB5R3P00387 301 aaPredicted RBP5.01□□□□□ -1.61
VPS29-210ENST00000552130 MRPL3P09001 348 aaKnown RBP5.01□□□□□ -1.61
VPS29-210ENST00000552130 GIPP09681 153 aaPredicted RBP5.01□□□□□ -1.61
VPS29-210ENST00000552130 FAM228BP0C875 321 aa5.01□□□□□ -1.61
VPS29-210ENST00000552130 SNHG28P0DPA3 235 aa5.01□□□□□ -1.61
VPS29-210ENST00000552130 PSG1P11464 419 aa5.01□□□□□ -1.61
VPS29-210ENST00000552130 ADRB3P13945 408 aa5.01□□□□□ -1.61
VPS29-210ENST00000552130 MPGP29372 298 aa5.01□□□□□ -1.61
VPS29-210ENST00000552130 TSPOP30536 169 aa5.01□□□□□ -1.61
VPS29-210ENST00000552130 ESRRGP62508 458 aa5.01□□□□□ -1.61
VPS29-210ENST00000552130 GNG3P63215 75 aa5.01□□□□□ -1.61
VPS29-210ENST00000552130 ZNF266Q14584 549 aa5.01□□□□□ -1.61
VPS29-210ENST00000552130 DEFB115Q30KQ5 88 aa5.01□□□□□ -1.61
VPS29-210ENST00000552130 ACSBG2Q5FVE4 666 aa5.01□□□□□ -1.61
VPS29-210ENST00000552130 KCTD16Q68DU8 428 aa5.01□□□□□ -1.61
VPS29-210ENST00000552130 PTAR1Q7Z6K3 402 aaPredicted RBP5.01□□□□□ -1.61
VPS29-210ENST00000552130 SMIM20Q8N5G0 67 aa5.01□□□□□ -1.61
VPS29-210ENST00000552130 WDSUB1Q8N9V3 476 aa5.01□□□□□ -1.61
VPS29-210ENST00000552130 OR6N1Q8NGY5 312 aa5.01□□□□□ -1.61
VPS29-210ENST00000552130 OR13G1Q8NGZ3 307 aa5.01□□□□□ -1.61
VPS29-210ENST00000552130 SLC37A2Q8TED4 501 aa5.01□□□□□ -1.61
VPS29-210ENST00000552130 DDB2Q92466 427 aa5.01□□□□□ -1.61
VPS29-210ENST00000552130 NABP1Q96AH0 204 aa5.01□□□□□ -1.61
VPS29-210ENST00000552130 CLDN23Q96B33 292 aa5.01□□□□□ -1.61
VPS29-210ENST00000552130 C12orf43Q96C57 262 aaKnown RBP5.01□□□□□ -1.61
VPS29-210ENST00000552130 QKIQ96PU8 341 aaKnown RBP eCLIP5.01□□□□□ -1.611e-6■■■■■ 30.1
VPS29-210ENST00000552130 ZNF300Q96RE9 604 aaPredicted RBP5.01□□□□□ -1.61
VPS29-210ENST00000552130 RBM38Q9H0Z9 239 aaKnown RBP5.01□□□□□ -1.61
VPS29-210ENST00000552130 TXNIPQ9H3M7 391 aa5.01□□□□□ -1.61
VPS29-210ENST00000552130 FBXL15Q9H469 300 aa5.01□□□□□ -1.61
VPS29-210ENST00000552130 EBF2Q9HAK2 575 aa5.01□□□□□ -1.61
VPS29-210ENST00000552130 MIEF1Q9NQG6 463 aa5.01□□□□□ -1.61
VPS29-210ENST00000552130 ARMCX1Q9P291 453 aa5.01□□□□□ -1.61
VPS29-210ENST00000552130 ZNF257Q9Y2Q1 563 aa5.01□□□□□ -1.61
VPS29-210ENST00000552130 FAM32AQ9Y421 112 aaKnown RBP5.01□□□□□ -1.61
VPS29-210ENST00000552130 V9GY05 133 aa5.01□□□□□ -1.61
VPS29-210ENST00000552130 MTCL1Q9Y4B5 1905 aaKnown RBP5.01□□□□□ -1.61
VPS29-210ENST00000552130 UPK1BO75841 260 aa5□□□□□ -1.61
VPS29-210ENST00000552130 CCNKO75909 580 aa5□□□□□ -1.61
VPS29-210ENST00000552130 HPNP05981 417 aa5□□□□□ -1.61
VPS29-210ENST00000552130 PRSS1P07477 247 aa5□□□□□ -1.61
VPS29-210ENST00000552130 PRSS2P07478 247 aa5□□□□□ -1.61
VPS29-210ENST00000552130 H2AFZP0C0S5 128 aa5□□□□□ -1.61
VPS29-210ENST00000552130 RCC1P18754 421 aaPredicted RBP5□□□□□ -1.61
VPS29-210ENST00000552130 PSMB9P28065 219 aa5□□□□□ -1.61
VPS29-210ENST00000552130 GCKP35557 465 aa5□□□□□ -1.61
VPS29-210ENST00000552130 TAS2R43P59537 309 aa5□□□□□ -1.61
VPS29-210ENST00000552130 PRSS8Q16651 343 aa5□□□□□ -1.61
VPS29-210ENST00000552130 C14orf28Q4W4Y0 310 aa5□□□□□ -1.61
VPS29-210ENST00000552130 TMEM215Q68D42 235 aa5□□□□□ -1.61
VPS29-210ENST00000552130 C11orf87Q6NUJ2 197 aa5□□□□□ -1.61
VPS29-210ENST00000552130 C5orf46Q6UWT4 87 aa5□□□□□ -1.61
VPS29-210ENST00000552130 CARM1Q86X55 608 aa5□□□□□ -1.61
VPS29-210ENST00000552130 HOGA1Q86XE5 327 aa5□□□□□ -1.61
VPS29-210ENST00000552130 OR10G7Q8NGN6 311 aa5□□□□□ -1.61
VPS29-210ENST00000552130 OR1P1Q8NH06 330 aa5□□□□□ -1.61
VPS29-210ENST00000552130 C11orf40Q8WZ69 217 aa5□□□□□ -1.61
VPS29-210ENST00000552130 CMSS1Q9BQ75 279 aaKnown RBP5□□□□□ -1.61
VPS29-210ENST00000552130 FAAP24Q9BTP7 215 aa5□□□□□ -1.61
VPS29-210ENST00000552130 KIFC1Q9BW19 673 aa5□□□□□ -1.61
VPS29-210ENST00000552130 SRXN1Q9BYN0 137 aa5□□□□□ -1.61
VPS29-210ENST00000552130 GSKIPQ9P0R6 139 aa5□□□□□ -1.61
VPS29-210ENST00000552130 VSIG4Q9Y279 399 aa5□□□□□ -1.61
VPS29-210ENST00000552130 SIGLEC9Q9Y336 463 aa5□□□□□ -1.61
VPS29-210ENST00000552130 KCNE3Q9Y6H6 103 aa5□□□□□ -1.61
VPS29-210ENST00000552130 IGHV4OR15-8A0A075B7B6 117 aa4.99□□□□□ -1.61
VPS29-210ENST00000552130 IGHV3OR16-12A0A075B7B8 117 aa4.99□□□□□ -1.61
VPS29-210ENST00000552130 ZNF98A6NK75 572 aa4.99□□□□□ -1.61
VPS29-210ENST00000552130 TRIM49D1C9J1S8 452 aa4.99□□□□□ -1.61
VPS29-210ENST00000552130 LINC01619G3V211 115 aa4.99□□□□□ -1.61
VPS29-210ENST00000552130 G3V2L1 256 aa4.99□□□□□ -1.61
VPS29-210ENST00000552130 GPR31O00270 319 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms