RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 ZNF732B4DXR9 585 aa11.47□□□□□ -0.57
CHMP1A-210ENST00000551981 SLC1A7O00341 560 aa11.47□□□□□ -0.57
CHMP1A-210ENST00000551981 RHBDL1O75783 438 aa11.47□□□□□ -0.57
CHMP1A-210ENST00000551981 IGLL1P15814 213 aa11.47□□□□□ -0.57
CHMP1A-210ENST00000551981 GSTT1P30711 240 aa11.47□□□□□ -0.57
CHMP1A-210ENST00000551981 GNG3P63215 75 aa11.47□□□□□ -0.57
CHMP1A-210ENST00000551981 SMIM21Q3B7S5 101 aa11.47□□□□□ -0.57
CHMP1A-210ENST00000551981 PLA1AQ53H76 456 aa11.47□□□□□ -0.57
CHMP1A-210ENST00000551981 LINC01590Q5TEZ4 76 aa11.47□□□□□ -0.57
CHMP1A-210ENST00000551981 WFDC9Q8NEX5 89 aa11.47□□□□□ -0.57
CHMP1A-210ENST00000551981 FAM81AQ8TBF8 368 aa11.47□□□□□ -0.57
CHMP1A-210ENST00000551981 NSMCE2Q96MF7 247 aa11.47□□□□□ -0.57
CHMP1A-210ENST00000551981 BTBD10Q9BSF8 475 aa11.47□□□□□ -0.57
CHMP1A-210ENST00000551981 FGF23Q9GZV9 251 aaPredicted RBP11.47□□□□□ -0.57
CHMP1A-210ENST00000551981 OR51I2Q9H344 312 aa11.47□□□□□ -0.57
CHMP1A-210ENST00000551981 LYVE1Q9Y5Y7 322 aa11.47□□□□□ -0.57
CHMP1A-210ENST00000551981 TNFRSF11BO00300 401 aa11.46□□□□□ -0.57
CHMP1A-210ENST00000551981 MTRF1O75570 445 aaKnown RBP11.46□□□□□ -0.57
CHMP1A-210ENST00000551981 CCNB2O95067 398 aa11.46□□□□□ -0.57
CHMP1A-210ENST00000551981 GASTP01350 101 aa11.46□□□□□ -0.57
CHMP1A-210ENST00000551981 PF4V1P10720 104 aa11.46□□□□□ -0.57
CHMP1A-210ENST00000551981 HMGA2P52926 109 aa11.46□□□□□ -0.57
CHMP1A-210ENST00000551981 TMEM200BQ69YZ2 307 aa11.46□□□□□ -0.57
CHMP1A-210ENST00000551981 TMEM219Q86XT9 240 aa11.46□□□□□ -0.57
CHMP1A-210ENST00000551981 ZNF561Q8N587 486 aa11.46□□□□□ -0.57
CHMP1A-210ENST00000551981 WIPF2Q8TF74 440 aaPredicted RBP11.46□□□□□ -0.57
CHMP1A-210ENST00000551981 OTULINQ96BN8 352 aa11.46□□□□□ -0.57
CHMP1A-210ENST00000551981 OR5M11Q96RB7 305 aa11.46□□□□□ -0.57
CHMP1A-210ENST00000551981 AMELYQ99218 206 aa11.46□□□□□ -0.57
CHMP1A-210ENST00000551981 WNT10AQ9GZT5 417 aa11.46□□□□□ -0.57
CHMP1A-210ENST00000551981 C1orf21Q9H246 121 aa11.46□□□□□ -0.57
CHMP1A-210ENST00000551981 TBL2Q9Y4P3 447 aaKnown RBP11.46□□□□□ -0.57
CHMP1A-210ENST00000551981 DNAH9Q9NYC9 4486 aa11.45□□□□□ -0.58
CHMP1A-210ENST00000551981 A6NDX4 124 aa11.45□□□□□ -0.58
CHMP1A-210ENST00000551981 FAM90A8PA6NJQ4 464 aa11.45□□□□□ -0.58
CHMP1A-210ENST00000551981 OR5B21A6NL26 309 aa11.45□□□□□ -0.58
CHMP1A-210ENST00000551981 H3BUI4 141 aa11.45□□□□□ -0.58
CHMP1A-210ENST00000551981 K7EIL1 84 aa11.45□□□□□ -0.58
CHMP1A-210ENST00000551981 ARPC2O15144 300 aa11.45□□□□□ -0.58
CHMP1A-210ENST00000551981 SOX14O95416 240 aa11.45□□□□□ -0.58
CHMP1A-210ENST00000551981 LYNP07948 512 aa11.45□□□□□ -0.58
CHMP1A-210ENST00000551981 VDAC2P45880 294 aaPredicted RBP11.45□□□□□ -0.58
CHMP1A-210ENST00000551981 MAP2K3P46734 347 aa11.45□□□□□ -0.58
CHMP1A-210ENST00000551981 RAB13P51153 203 aa11.45□□□□□ -0.58
CHMP1A-210ENST00000551981 SLC35A2P78381 396 aa11.45□□□□□ -0.58
CHMP1A-210ENST00000551981 CEACAM21Q3KPI0 293 aa11.45□□□□□ -0.58
CHMP1A-210ENST00000551981 ZNF770Q6IQ21 691 aaPredicted RBP11.45□□□□□ -0.58
CHMP1A-210ENST00000551981 ZNF782Q6ZMW2 699 aaPredicted RBP11.45□□□□□ -0.58
CHMP1A-210ENST00000551981 LHFPL4Q7Z7J7 247 aa11.45□□□□□ -0.58
CHMP1A-210ENST00000551981 CALHM1Q8IU99 346 aa11.45□□□□□ -0.58
CHMP1A-210ENST00000551981 C11orf42Q8N5U0 333 aa11.45□□□□□ -0.58
CHMP1A-210ENST00000551981 ZNF454Q8N9F8 522 aa11.45□□□□□ -0.58
CHMP1A-210ENST00000551981 AQP11Q8NBQ7 271 aa11.45□□□□□ -0.58
CHMP1A-210ENST00000551981 OR13D1Q8NGV5 346 aa11.45□□□□□ -0.58
CHMP1A-210ENST00000551981 OR2T27Q8NH04 317 aa11.45□□□□□ -0.58
CHMP1A-210ENST00000551981 OR4Q3Q8NH05 313 aa11.45□□□□□ -0.58
CHMP1A-210ENST00000551981 AQP3Q92482 292 aa11.45□□□□□ -0.58
CHMP1A-210ENST00000551981 MALSU1Q96EH3 234 aa11.45□□□□□ -0.58
CHMP1A-210ENST00000551981 LYZL4Q96KX0 146 aa11.45□□□□□ -0.58
CHMP1A-210ENST00000551981 NIPAL2Q9H841 368 aa11.45□□□□□ -0.58
CHMP1A-210ENST00000551981 CMC2Q9NRP2 79 aa11.45□□□□□ -0.58
CHMP1A-210ENST00000551981 ARMC1Q9NVT9 282 aa11.45□□□□□ -0.58
CHMP1A-210ENST00000551981 A0A1W2PRX2 142 aa11.44□□□□□ -0.58
CHMP1A-210ENST00000551981 RFPL4AA6NLU0 287 aa11.44□□□□□ -0.58
CHMP1A-210ENST00000551981 RFPL4AL1F8VTS6 287 aa11.44□□□□□ -0.58
CHMP1A-210ENST00000551981 PF4P02776 101 aa11.44□□□□□ -0.58
CHMP1A-210ENST00000551981 ARG1P05089 322 aa11.44□□□□□ -0.58
CHMP1A-210ENST00000551981 HSD17B1P14061 328 aa11.44□□□□□ -0.58
CHMP1A-210ENST00000551981 CCL3L1P16619 93 aa11.44□□□□□ -0.58
CHMP1A-210ENST00000551981 PSMA6P60900 246 aaKnown RBP11.44□□□□□ -0.58
CHMP1A-210ENST00000551981 DEFB121Q5J5C9 76 aa11.44□□□□□ -0.58
CHMP1A-210ENST00000551981 CEP78Q5JTW2 689 aa11.44□□□□□ -0.58
CHMP1A-210ENST00000551981 C11orf87Q6NUJ2 197 aa11.44□□□□□ -0.58
CHMP1A-210ENST00000551981 HAGHLQ6PII5 290 aaPredicted RBP11.44□□□□□ -0.58
CHMP1A-210ENST00000551981 CCBE1Q6UXH8 406 aaPredicted RBP11.44□□□□□ -0.58
CHMP1A-210ENST00000551981 ACP7Q6ZNF0 438 aa11.44□□□□□ -0.58
CHMP1A-210ENST00000551981 OR4M1Q8NGD0 313 aa11.44□□□□□ -0.58
CHMP1A-210ENST00000551981 OR8B12Q8NGG6 310 aa11.44□□□□□ -0.58
CHMP1A-210ENST00000551981 OR5A2Q8NGI9 324 aa11.44□□□□□ -0.58
CHMP1A-210ENST00000551981 OTOSQ8NHW6 89 aa11.44□□□□□ -0.58
CHMP1A-210ENST00000551981 THEM6Q8WUY1 208 aa11.44□□□□□ -0.58
CHMP1A-210ENST00000551981 ITFG2Q969R8 447 aa11.44□□□□□ -0.58
CHMP1A-210ENST00000551981 OCSTAMPQ9BR26 566 aa11.44□□□□□ -0.58
CHMP1A-210ENST00000551981 CCDC134Q9H6E4 229 aa11.44□□□□□ -0.58
CHMP1A-210ENST00000551981 MED20Q9H944 212 aa11.44□□□□□ -0.58
CHMP1A-210ENST00000551981 FAM183AA6NL82 134 aa11.43□□□□□ -0.58
CHMP1A-210ENST00000551981 F2RL2O00254 374 aa11.43□□□□□ -0.58
CHMP1A-210ENST00000551981 DUS4LO95620 317 aaKnown RBP11.43□□□□□ -0.58
CHMP1A-210ENST00000551981 VSIG8P0DPA2 414 aa11.43□□□□□ -0.58
CHMP1A-210ENST00000551981 PRDX6P30041 224 aa11.43□□□□□ -0.58
CHMP1A-210ENST00000551981 PRDX2P32119 198 aa11.43□□□□□ -0.58
CHMP1A-210ENST00000551981 SSX2Q16385 188 aa11.43□□□□□ -0.58
CHMP1A-210ENST00000551981 KRT74Q7RTS7 529 aa11.43□□□□□ -0.58
CHMP1A-210ENST00000551981 COMMD2Q86X83 199 aa11.43□□□□□ -0.58
CHMP1A-210ENST00000551981 DYNAPQ8N1N2 210 aa11.43□□□□□ -0.58
CHMP1A-210ENST00000551981 CD177Q8N6Q3 437 aa11.43□□□□□ -0.58
CHMP1A-210ENST00000551981 POC1AQ8NBT0 407 aa11.43□□□□□ -0.58
CHMP1A-210ENST00000551981 OR5AU1Q8NGC0 362 aa11.43□□□□□ -0.58
CHMP1A-210ENST00000551981 RCC1LQ96I51 464 aaKnown RBP11.43□□□□□ -0.58
CHMP1A-210ENST00000551981 ODF3BA8MYP8 253 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms