RNA–Protein interactions for RNA: ENST00000551642.1

DEPDC4-210, Transcript of DEP domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene DEPDC4, Length 1,033 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-210ENST00000551642 TUBA1BP68363 451 aa5.45□□□□□ -1.54
DEPDC4-210ENST00000551642 ST3GAL4Q11206 333 aa5.45□□□□□ -1.54
DEPDC4-210ENST00000551642 EIF2B1Q14232 305 aaKnown RBP5.45□□□□□ -1.54
DEPDC4-210ENST00000551642 GALEQ14376 348 aa5.45□□□□□ -1.54
DEPDC4-210ENST00000551642 KRTAP27-1Q3LI81 207 aa5.45□□□□□ -1.54
DEPDC4-210ENST00000551642 ELFN2Q5R3F8 820 aa5.45□□□□□ -1.54
DEPDC4-210ENST00000551642 ZNF684Q5T5D7 378 aa5.45□□□□□ -1.54
DEPDC4-210ENST00000551642 RNLSQ5VYX0 342 aa5.45□□□□□ -1.54
DEPDC4-210ENST00000551642 OTPQ5XKR4 325 aa5.45□□□□□ -1.54
DEPDC4-210ENST00000551642 KCTD18Q6PI47 426 aaPredicted RBP5.45□□□□□ -1.54
DEPDC4-210ENST00000551642 CORO6Q6QEF8 472 aa5.45□□□□□ -1.54
DEPDC4-210ENST00000551642 USP43Q70EL4 1123 aa5.45□□□□□ -1.54
DEPDC4-210ENST00000551642 TUBA1AQ71U36 451 aa5.45□□□□□ -1.54
DEPDC4-210ENST00000551642 ZSCAN2Q7Z7L9 614 aaPredicted RBP5.45□□□□□ -1.54
DEPDC4-210ENST00000551642 ZNF584Q8IVC4 421 aa5.45□□□□□ -1.54
DEPDC4-210ENST00000551642 LINC00346Q8IVM7 164 aa5.45□□□□□ -1.54
DEPDC4-210ENST00000551642 SLC35F2Q8IXU6 374 aa5.45□□□□□ -1.54
DEPDC4-210ENST00000551642 ZNF679Q8IYX0 411 aa5.45□□□□□ -1.54
DEPDC4-210ENST00000551642 ZNF786Q8N393 782 aa5.45□□□□□ -1.54
DEPDC4-210ENST00000551642 ACBD7Q8N6N7 88 aa5.45□□□□□ -1.54
DEPDC4-210ENST00000551642 ZNF540Q8NDQ6 660 aa5.45□□□□□ -1.54
DEPDC4-210ENST00000551642 BPIFB6Q8NFQ5 453 aa5.45□□□□□ -1.54
DEPDC4-210ENST00000551642 OR4F15Q8NGB8 312 aa5.45□□□□□ -1.54
DEPDC4-210ENST00000551642 OR52I1Q8NGK6 324 aa5.45□□□□□ -1.54
DEPDC4-210ENST00000551642 OR10S1Q8NGN2 331 aa5.45□□□□□ -1.54
DEPDC4-210ENST00000551642 OR1F12Q8NHA8 337 aa5.45□□□□□ -1.54
DEPDC4-210ENST00000551642 AKR7LQ8NHP1 331 aa5.45□□□□□ -1.54
DEPDC4-210ENST00000551642 THEM6Q8WUY1 208 aa5.45□□□□□ -1.54
DEPDC4-210ENST00000551642 RNF133Q8WVZ7 376 aa5.45□□□□□ -1.54
DEPDC4-210ENST00000551642 SLAMF6Q96DU3 332 aa5.45□□□□□ -1.54
DEPDC4-210ENST00000551642 TMEM80Q96HE8 168 aa5.45□□□□□ -1.54
DEPDC4-210ENST00000551642 AMELYQ99218 206 aa5.45□□□□□ -1.54
DEPDC4-210ENST00000551642 COQ7Q99807 217 aa5.45□□□□□ -1.54
DEPDC4-210ENST00000551642 ATF6BQ99941 703 aa5.45□□□□□ -1.54
DEPDC4-210ENST00000551642 ZNF649Q9BS31 505 aa5.45□□□□□ -1.54
DEPDC4-210ENST00000551642 C1QTNF5Q9BXJ0 243 aa5.45□□□□□ -1.54
DEPDC4-210ENST00000551642 WNT5BQ9H1J7 359 aa5.45□□□□□ -1.54
DEPDC4-210ENST00000551642 MMP27Q9H306 513 aa5.45□□□□□ -1.54
DEPDC4-210ENST00000551642 PLEK2Q9NYT0 353 aa5.45□□□□□ -1.54
DEPDC4-210ENST00000551642 NPAP1Q9NZP6 1156 aa5.45□□□□□ -1.54
DEPDC4-210ENST00000551642 LAMP5Q9UJQ1 280 aa5.45□□□□□ -1.54
DEPDC4-210ENST00000551642 DIMT1Q9UNQ2 313 aaKnown RBP5.45□□□□□ -1.54
DEPDC4-210ENST00000551642 COPS3Q9UNS2 423 aa5.45□□□□□ -1.54
DEPDC4-210ENST00000551642 KLHDC2Q9Y2U9 406 aa5.45□□□□□ -1.54
DEPDC4-210ENST00000551642 TPRKBQ9Y3C4 175 aa5.45□□□□□ -1.54
DEPDC4-210ENST00000551642 HERC1Q15751 4861 aa5.44□□□□□ -1.54
DEPDC4-210ENST00000551642 LOC100509620A0A075B734 347 aa5.44□□□□□ -1.54
DEPDC4-210ENST00000551642 DAPL1A0PJW8 107 aa5.44□□□□□ -1.54
DEPDC4-210ENST00000551642 ZNF670-ZNF695F2Z2N8 137 aa5.44□□□□□ -1.54
DEPDC4-210ENST00000551642 MRPS14O60783 128 aaKnown RBP5.44□□□□□ -1.54
DEPDC4-210ENST00000551642 SULT1C4O75897 302 aa5.44□□□□□ -1.54
DEPDC4-210ENST00000551642 LY6HO94772 140 aa5.44□□□□□ -1.54
DEPDC4-210ENST00000551642 APOC1P02654 83 aa5.44□□□□□ -1.54
DEPDC4-210ENST00000551642 CDK1P06493 297 aa5.44□□□□□ -1.54
DEPDC4-210ENST00000551642 CECR9P0C854 216 aa5.44□□□□□ -1.54
DEPDC4-210ENST00000551642 ZNF35P13682 527 aa5.44□□□□□ -1.54
DEPDC4-210ENST00000551642 STOMP27105 288 aa5.44□□□□□ -1.54
DEPDC4-210ENST00000551642 IL2RGP31785 369 aa5.44□□□□□ -1.54
DEPDC4-210ENST00000551642 OTX1P32242 354 aaPredicted RBP5.44□□□□□ -1.54
DEPDC4-210ENST00000551642 APLNRP35414 380 aa5.44□□□□□ -1.54
DEPDC4-210ENST00000551642 HTR5AP47898 357 aa5.44□□□□□ -1.54
DEPDC4-210ENST00000551642 GDI2P50395 445 aaKnown RBP5.44□□□□□ -1.54
DEPDC4-210ENST00000551642 ZNF83P51522 516 aa5.44□□□□□ -1.54
DEPDC4-210ENST00000551642 IDH3GP51553 393 aaPredicted RBP5.44□□□□□ -1.54
DEPDC4-210ENST00000551642 ACTA2P62736 377 aa5.44□□□□□ -1.54
DEPDC4-210ENST00000551642 GRB2P62993 217 aaKnown RBP5.44□□□□□ -1.54
DEPDC4-210ENST00000551642 ACTG2P63267 376 aa5.44□□□□□ -1.54
DEPDC4-210ENST00000551642 ZNF85Q03923 595 aa5.44□□□□□ -1.54
DEPDC4-210ENST00000551642 RBMS2Q15434 407 aaKnown RBP5.44□□□□□ -1.54
DEPDC4-210ENST00000551642 TBC1D28Q2M2D7 210 aa5.44□□□□□ -1.54
DEPDC4-210ENST00000551642 RSPO1Q2MKA7 263 aaPredicted RBP5.44□□□□□ -1.54
DEPDC4-210ENST00000551642 KCTD21Q4G0X4 260 aa5.44□□□□□ -1.54
DEPDC4-210ENST00000551642 CDONQ4KMG0 1287 aa5.44□□□□□ -1.54
DEPDC4-210ENST00000551642 NCMAPQ5T1S8 102 aa5.44□□□□□ -1.54
DEPDC4-210ENST00000551642 KPRPQ5T749 579 aaPredicted RBP5.44□□□□□ -1.54
DEPDC4-210ENST00000551642 ZNF774Q6NX45 483 aa5.44□□□□□ -1.54
DEPDC4-210ENST00000551642 ZNF322Q6U7Q0 402 aaPredicted RBP5.44□□□□□ -1.54
DEPDC4-210ENST00000551642 PLEKHG7Q6ZR37 379 aa5.44□□□□□ -1.54
DEPDC4-210ENST00000551642 AHSA2Q719I0 299 aa5.44□□□□□ -1.54
DEPDC4-210ENST00000551642 SSX6Q7RTT6 188 aa5.44□□□□□ -1.54
DEPDC4-210ENST00000551642 MYPOPQ86VE0 399 aaPredicted RBP5.44□□□□□ -1.54
DEPDC4-210ENST00000551642 C1orf174Q8IYL3 243 aa5.44□□□□□ -1.54
DEPDC4-210ENST00000551642 SYS1Q8N2H4 156 aa5.44□□□□□ -1.54
DEPDC4-210ENST00000551642 STX19Q8N4C7 294 aa5.44□□□□□ -1.54
DEPDC4-210ENST00000551642 SLC30A7Q8NEW0 376 aa5.44□□□□□ -1.54
DEPDC4-210ENST00000551642 OR10H4Q8NGA5 316 aa5.44□□□□□ -1.54
DEPDC4-210ENST00000551642 OR1J2Q8NGS2 313 aa5.44□□□□□ -1.54
DEPDC4-210ENST00000551642 ZNF418Q8TF45 676 aaPredicted RBP5.44□□□□□ -1.54
DEPDC4-210ENST00000551642 MYDGFQ969H8 173 aa5.44□□□□□ -1.54
DEPDC4-210ENST00000551642 SPTSSAQ969W0 71 aa5.44□□□□□ -1.54
DEPDC4-210ENST00000551642 MRPL48Q96GC5 212 aaKnown RBP5.44□□□□□ -1.54
DEPDC4-210ENST00000551642 POM121L2Q96KW2 1035 aa5.44□□□□□ -1.54
DEPDC4-210ENST00000551642 OR8B4Q96RC9 309 aa5.44□□□□□ -1.54
DEPDC4-210ENST00000551642 NR1H4Q96RI1 486 aaPredicted RBP5.44□□□□□ -1.54
DEPDC4-210ENST00000551642 COPS4Q9BT78 406 aa5.44□□□□□ -1.54
DEPDC4-210ENST00000551642 CDCA4Q9BXL8 241 aa5.44□□□□□ -1.54
DEPDC4-210ENST00000551642 MROQ9BYG7 248 aa5.44□□□□□ -1.54
DEPDC4-210ENST00000551642 SLITRK2Q9H156 845 aa5.44□□□□□ -1.54
DEPDC4-210ENST00000551642 NIPAL2Q9H841 368 aa5.44□□□□□ -1.54
DEPDC4-210ENST00000551642 PAK1IP1Q9NWT1 392 aaPredicted RBP5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms