RNA–Protein interactions for RNA: ENST00000550220.1

VTI1BP3-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 3, humanhuman

BASIC

Gene VTI1BP3, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP3-201ENST00000550220 SMIM21Q3B7S5 101 aa8.95□□□□□ -0.98
VTI1BP3-201ENST00000550220 ZNF684Q5T5D7 378 aa8.95□□□□□ -0.98
VTI1BP3-201ENST00000550220 ZNF322Q6U7Q0 402 aaPredicted RBP8.95□□□□□ -0.98
VTI1BP3-201ENST00000550220 TREML4Q6UXN2 200 aa8.95□□□□□ -0.98
VTI1BP3-201ENST00000550220 MOB3CQ70IA8 216 aa8.95□□□□□ -0.98
VTI1BP3-201ENST00000550220 GID4Q8IVV7 300 aa8.95□□□□□ -0.98
VTI1BP3-201ENST00000550220 DTX3Q8N9I9 347 aa8.95□□□□□ -0.98
VTI1BP3-201ENST00000550220 OR5R1Q8NH85 324 aa8.95□□□□□ -0.98
VTI1BP3-201ENST00000550220 OR51E1Q8TCB6 317 aa8.95□□□□□ -0.98
VTI1BP3-201ENST00000550220 SDSLQ96GA7 329 aa8.95□□□□□ -0.98
VTI1BP3-201ENST00000550220 GAFA1Q96PS6 74 aa8.95□□□□□ -0.98
VTI1BP3-201ENST00000550220 OSBPL10Q9BXB5 764 aa8.95□□□□□ -0.98
VTI1BP3-201ENST00000550220 FAM234AQ9H0X4 552 aa8.95□□□□□ -0.98
VTI1BP3-201ENST00000550220 WDR13Q9H1Z4 485 aa8.95□□□□□ -0.98
VTI1BP3-201ENST00000550220 PPP1R3EQ9H7J1 279 aa8.95□□□□□ -0.98
VTI1BP3-201ENST00000550220 TNFRSF19Q9NS68 423 aa8.95□□□□□ -0.98
VTI1BP3-201ENST00000550220 SNTG1Q9NSN8 517 aa8.95□□□□□ -0.98
VTI1BP3-201ENST00000550220 PIGLQ9Y2B2 252 aa8.95□□□□□ -0.98
VTI1BP3-201ENST00000550220 POLDIP2Q9Y2S7 368 aa8.95□□□□□ -0.98
VTI1BP3-201ENST00000550220 SF3B6Q9Y3B4 125 aaKnown RBP8.95□□□□□ -0.98
VTI1BP3-201ENST00000550220 SNX5Q9Y5X3 404 aa8.95□□□□□ -0.98
VTI1BP3-201ENST00000550220 A0A1W2PQ09 198 aa8.94□□□□□ -0.98
VTI1BP3-201ENST00000550220 ZNF670-ZNF695F2Z2N8 137 aa8.94□□□□□ -0.98
VTI1BP3-201ENST00000550220 LOC110117498-PIK3R3F6TDL0 507 aa8.94□□□□□ -0.98
VTI1BP3-201ENST00000550220 SLC1A7O00341 560 aa8.94□□□□□ -0.98
VTI1BP3-201ENST00000550220 TIMM23O14925 209 aa8.94□□□□□ -0.98
VTI1BP3-201ENST00000550220 NPFFO15130 113 aa8.94□□□□□ -0.98
VTI1BP3-201ENST00000550220 PRKYO43930 277 aa8.94□□□□□ -0.98
VTI1BP3-201ENST00000550220 GPR137BO60478 399 aa8.94□□□□□ -0.98
VTI1BP3-201ENST00000550220 FCN3O75636 299 aa8.94□□□□□ -0.98
VTI1BP3-201ENST00000550220 IGLV3-1P01715 115 aa8.94□□□□□ -0.98
VTI1BP3-201ENST00000550220 MRPL3P09001 348 aaKnown RBP8.94□□□□□ -0.98
VTI1BP3-201ENST00000550220 TGFBR2P37173 567 aa8.94□□□□□ -0.98
VTI1BP3-201ENST00000550220 GMFBP60983 142 aa8.94□□□□□ -0.98
VTI1BP3-201ENST00000550220 CXCR4P61073 352 aa8.94□□□□□ -0.98
VTI1BP3-201ENST00000550220 EFNB1P98172 346 aa8.94□□□□□ -0.98
VTI1BP3-201ENST00000550220 BNIP1Q12981 228 aa8.94□□□□□ -0.98
VTI1BP3-201ENST00000550220 DGUOKQ16854 277 aa8.94□□□□□ -0.98
VTI1BP3-201ENST00000550220 CLVS2Q5SYC1 327 aa8.94□□□□□ -0.98
VTI1BP3-201ENST00000550220 BCL2L15Q5TBC7 163 aa8.94□□□□□ -0.98
VTI1BP3-201ENST00000550220 AADACL4Q5VUY2 407 aa8.94□□□□□ -0.98
VTI1BP3-201ENST00000550220 SLX4IPQ5VYV7 408 aa8.94□□□□□ -0.98
VTI1BP3-201ENST00000550220 PLCXD3Q63HM9 321 aa8.94□□□□□ -0.98
VTI1BP3-201ENST00000550220 SLC35F2Q8IXU6 374 aa8.94□□□□□ -0.98
VTI1BP3-201ENST00000550220 ELMOD2Q8IZ81 293 aa8.94□□□□□ -0.98
VTI1BP3-201ENST00000550220 CCDC54Q8NEL0 328 aa8.94□□□□□ -0.98
VTI1BP3-201ENST00000550220 TMEM163Q8TC26 289 aa8.94□□□□□ -0.98
VTI1BP3-201ENST00000550220 AQP3Q92482 292 aa8.94□□□□□ -0.98
VTI1BP3-201ENST00000550220 SEH1LQ96EE3 360 aa8.94□□□□□ -0.98
VTI1BP3-201ENST00000550220 CADM1Q9BY67 442 aaKnown RBP8.94□□□□□ -0.98
VTI1BP3-201ENST00000550220 CLN6Q9NWW5 311 aa8.94□□□□□ -0.98
VTI1BP3-201ENST00000550220 WARS2Q9UGM6 360 aaKnown RBP8.94□□□□□ -0.98
VTI1BP3-201ENST00000550220 AP4S1Q9Y587 144 aa8.94□□□□□ -0.98
VTI1BP3-201ENST00000550220 R4GMQ9 66 aa8.94□□□□□ -0.98
VTI1BP3-201ENST00000550220 A0A1B0GW55 424 aa8.93□□□□□ -0.98
VTI1BP3-201ENST00000550220 ZAR1LA6NP61 321 aa8.93□□□□□ -0.98
VTI1BP3-201ENST00000550220 H0YAE9 185 aa8.93□□□□□ -0.98
VTI1BP3-201ENST00000550220 M0QZ24 198 aa8.93□□□□□ -0.98
VTI1BP3-201ENST00000550220 PSMD9O00233 223 aa8.93□□□□□ -0.98
VTI1BP3-201ENST00000550220 NOS1APO75052 506 aaPredicted RBP8.93□□□□□ -0.98
VTI1BP3-201ENST00000550220 RHBDL1O75783 438 aa8.93□□□□□ -0.98
VTI1BP3-201ENST00000550220 IGHV4-59P01825 116 aa8.93□□□□□ -0.98
VTI1BP3-201ENST00000550220 KRT8P05787 483 aa8.93□□□□□ -0.98
VTI1BP3-201ENST00000550220 DUX4L2P0CJ85 424 aa8.93□□□□□ -0.98
VTI1BP3-201ENST00000550220 DUX4L3P0CJ86 424 aa8.93□□□□□ -0.98
VTI1BP3-201ENST00000550220 DUX4L4P0CJ87 422 aa8.93□□□□□ -0.98
VTI1BP3-201ENST00000550220 DUX4L5P0CJ88 424 aa8.93□□□□□ -0.98
VTI1BP3-201ENST00000550220 DUX4L6P0CJ89 424 aa8.93□□□□□ -0.98
VTI1BP3-201ENST00000550220 DUX4L7P0CJ90 424 aa8.93□□□□□ -0.98
VTI1BP3-201ENST00000550220 PSG2P11465 335 aa8.93□□□□□ -0.98
VTI1BP3-201ENST00000550220 TMED1Q13445 227 aa8.93□□□□□ -0.98
VTI1BP3-201ENST00000550220 MIDNQ504T8 468 aa8.93□□□□□ -0.98
VTI1BP3-201ENST00000550220 CEP78Q5JTW2 689 aa8.93□□□□□ -0.98
VTI1BP3-201ENST00000550220 TMEM42Q69YG0 159 aa8.93□□□□□ -0.98
VTI1BP3-201ENST00000550220 KDM4DQ6B0I6 523 aa8.93□□□□□ -0.98
VTI1BP3-201ENST00000550220 HAGHLQ6PII5 290 aaPredicted RBP8.93□□□□□ -0.98
VTI1BP3-201ENST00000550220 DUX4L9Q6RFH8 374 aaPredicted RBP8.93□□□□□ -0.98
VTI1BP3-201ENST00000550220 PDZD9Q8IXQ8 264 aa8.93□□□□□ -0.98
VTI1BP3-201ENST00000550220 ZNF561Q8N587 486 aa8.93□□□□□ -0.98
VTI1BP3-201ENST00000550220 Q8N7P7 452 aa8.93□□□□□ -0.98
VTI1BP3-201ENST00000550220 TCEANCQ8N8B7 351 aa8.93□□□□□ -0.98
VTI1BP3-201ENST00000550220 ZSCAN4Q8NAM6 433 aaPredicted RBP8.93□□□□□ -0.98
VTI1BP3-201ENST00000550220 POC1AQ8NBT0 407 aa8.93□□□□□ -0.98
VTI1BP3-201ENST00000550220 TMEM185AQ8NFB2 350 aa8.93□□□□□ -0.98
VTI1BP3-201ENST00000550220 WFDC12Q8WWY7 111 aa8.93□□□□□ -0.98
VTI1BP3-201ENST00000550220 DUS3LQ96G46 650 aaKnown RBP8.93□□□□□ -0.98
VTI1BP3-201ENST00000550220 FGF23Q9GZV9 251 aaPredicted RBP8.93□□□□□ -0.98
VTI1BP3-201ENST00000550220 GABARAPL1Q9H0R8 117 aa8.93□□□□□ -0.98
VTI1BP3-201ENST00000550220 C16orf95Q9H693 158 aa8.93□□□□□ -0.98
VTI1BP3-201ENST00000550220 HEXA-AS1Q9H8Q6 139 aa8.93□□□□□ -0.98
VTI1BP3-201ENST00000550220 ADGRL4Q9HBW9 690 aa8.93□□□□□ -0.98
VTI1BP3-201ENST00000550220 SIRT7Q9NRC8 400 aa8.93□□□□□ -0.98
VTI1BP3-201ENST00000550220 FAM53CQ9NYF3 392 aa8.93□□□□□ -0.98
VTI1BP3-201ENST00000550220 ZNRD1Q9P1U0 126 aa8.93□□□□□ -0.98
VTI1BP3-201ENST00000550220 DUX4Q9UBX2 424 aa8.93□□□□□ -0.98
VTI1BP3-201ENST00000550220 VPREB3Q9UKI3 123 aa8.93□□□□□ -0.98
VTI1BP3-201ENST00000550220 GTF2A1LQ9UNN4 478 aa8.93□□□□□ -0.98
VTI1BP3-201ENST00000550220 COPS3Q9UNS2 423 aa8.93□□□□□ -0.98
VTI1BP3-201ENST00000550220 RNF114Q9Y508 228 aa8.93□□□□□ -0.98
VTI1BP3-201ENST00000550220 TRRAPQ9Y4A5 3859 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms