RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 FBXW12Q6X9E4 464 aa11.24□□□□□ -0.61
NUP188-211ENST00000550219 LRRC28Q86X40 367 aaPredicted RBP11.24□□□□□ -0.61
NUP188-211ENST00000550219 ZFP41Q8N8Y5 198 aa11.24□□□□□ -0.61
NUP188-211ENST00000550219 PLPP7Q8NBV4 271 aa11.24□□□□□ -0.61
NUP188-211ENST00000550219 MEGF10Q96KG7 1140 aa11.24□□□□□ -0.61
NUP188-211ENST00000550219 LYZL4Q96KX0 146 aa11.24□□□□□ -0.61
NUP188-211ENST00000550219 OPA3Q9H6K4 179 aa11.24□□□□□ -0.61
NUP188-211ENST00000550219 VCX3AQ9NNX9 186 aa11.24□□□□□ -0.61
NUP188-211ENST00000550219 ZNF69Q9UC07 566 aa11.24□□□□□ -0.61
NUP188-211ENST00000550219 NUP50Q9UKX7 468 aa11.24□□□□□ -0.61
NUP188-211ENST00000550219 N6AMT1Q9Y5N5 214 aa11.24□□□□□ -0.61
NUP188-211ENST00000550219 INSIG2Q9Y5U4 225 aa11.24□□□□□ -0.61
NUP188-211ENST00000550219 PPIAL4EA0A075B759 164 aa11.23□□□□□ -0.61
NUP188-211ENST00000550219 PPIAL4CA0A0B4J2A2 164 aa11.23□□□□□ -0.61
NUP188-211ENST00000550219 DNAJC9-AS1A6NH13 148 aa11.23□□□□□ -0.61
NUP188-211ENST00000550219 F5H0A9 414 aaPredicted RBP11.23□□□□□ -0.61
NUP188-211ENST00000550219 PPIAL4DF5H284 164 aa11.23□□□□□ -0.61
NUP188-211ENST00000550219 H0YL77 283 aa11.23□□□□□ -0.61
NUP188-211ENST00000550219 TMEM178BH3BS89 294 aa11.23□□□□□ -0.61
NUP188-211ENST00000550219 TBX1O43435 398 aa11.23□□□□□ -0.61
NUP188-211ENST00000550219 HSMCR30P0CW71 290 aa11.23□□□□□ -0.61
NUP188-211ENST00000550219 PPIAL4FP0DN26 164 aa11.23□□□□□ -0.61
NUP188-211ENST00000550219 ZNF12P17014 697 aa11.23□□□□□ -0.61
NUP188-211ENST00000550219 CELP19835 753 aa11.23□□□□□ -0.61
NUP188-211ENST00000550219 CFL1P23528 166 aaKnown RBP11.23□□□□□ -0.61
NUP188-211ENST00000550219 PSMB9P28065 219 aa11.23□□□□□ -0.61
NUP188-211ENST00000550219 ALDH3B2P48448 385 aa11.23□□□□□ -0.61
NUP188-211ENST00000550219 MALLQ13021 153 aa11.23□□□□□ -0.61
NUP188-211ENST00000550219 GK2Q14410 553 aaPredicted RBP11.23□□□□□ -0.61
NUP188-211ENST00000550219 SSX1Q16384 188 aa11.23□□□□□ -0.61
NUP188-211ENST00000550219 TMEM244Q5VVB8 128 aa11.23□□□□□ -0.61
NUP188-211ENST00000550219 KRT74Q7RTS7 529 aa11.23□□□□□ -0.61
NUP188-211ENST00000550219 MOGAT3Q86VF5 341 aa11.23□□□□□ -0.61
NUP188-211ENST00000550219 BCL6BQ8N143 479 aaPredicted RBP11.23□□□□□ -0.61
NUP188-211ENST00000550219 MUC20Q8N307 709 aaPredicted RBP11.23□□□□□ -0.61
NUP188-211ENST00000550219 CCDC54Q8NEL0 328 aa11.23□□□□□ -0.61
NUP188-211ENST00000550219 OR5AK2Q8NH90 309 aa11.23□□□□□ -0.61
NUP188-211ENST00000550219 OR2AE1Q8NHA4 323 aa11.23□□□□□ -0.61
NUP188-211ENST00000550219 OR51E1Q8TCB6 317 aa11.23□□□□□ -0.61
NUP188-211ENST00000550219 GHSRQ92847 366 aa11.23□□□□□ -0.61
NUP188-211ENST00000550219 UFD1Q92890 307 aa11.23□□□□□ -0.61
NUP188-211ENST00000550219 DVL3Q92997 716 aaPredicted RBP11.23□□□□□ -0.61
NUP188-211ENST00000550219 REEP6Q96HR9 211 aa11.23□□□□□ -0.61
NUP188-211ENST00000550219 PDCD1LG2Q9BQ51 273 aa11.23□□□□□ -0.61
NUP188-211ENST00000550219 GCM1Q9NP62 436 aa11.23□□□□□ -0.61
NUP188-211ENST00000550219 GPR84Q9NQS5 396 aa11.23□□□□□ -0.61
NUP188-211ENST00000550219 GTF2A1LQ9UNN4 478 aa11.23□□□□□ -0.61
NUP188-211ENST00000550219 ZNF281Q9Y2X9 895 aa11.23□□□□□ -0.61
NUP188-211ENST00000550219 SF3B6Q9Y3B4 125 aaKnown RBP11.23□□□□□ -0.61
NUP188-211ENST00000550219 DYSFO75923 2080 aa11.23□□□□□ -0.61
NUP188-211ENST00000550219 hCG_38984A0A1B0GV85 526 aa11.22□□□□□ -0.61
NUP188-211ENST00000550219 A8MXK9 166 aa11.22□□□□□ -0.61
NUP188-211ENST00000550219 F5H5P2 479 aa11.22□□□□□ -0.61
NUP188-211ENST00000550219 P2RY10O00398 339 aa11.22□□□□□ -0.61
NUP188-211ENST00000550219 MLNRO43193 412 aa11.22□□□□□ -0.61
NUP188-211ENST00000550219 SELEP16581 610 aa11.22□□□□□ -0.61
NUP188-211ENST00000550219 SRP9P49458 86 aaKnown RBP11.22□□□□□ -0.61
NUP188-211ENST00000550219 RPS11P62280 158 aaKnown RBP eCLIP11.22□□□□□ -0.61
NUP188-211ENST00000550219 GNB2P62879 340 aa11.22□□□□□ -0.61
NUP188-211ENST00000550219 FAM3AP98173 230 aa11.22□□□□□ -0.61
NUP188-211ENST00000550219 OR8B8Q15620 311 aa11.22□□□□□ -0.61
NUP188-211ENST00000550219 KLF17Q5JT82 389 aaPredicted RBP11.22□□□□□ -0.61
NUP188-211ENST00000550219 LIPKQ5VXJ0 399 aa11.22□□□□□ -0.61
NUP188-211ENST00000550219 RDH10Q8IZV5 341 aa11.22□□□□□ -0.61
NUP188-211ENST00000550219 ZNF676Q8N7Q3 588 aa11.22□□□□□ -0.61
NUP188-211ENST00000550219 OR8G5Q8NG78 346 aa11.22□□□□□ -0.61
NUP188-211ENST00000550219 OR13G1Q8NGZ3 307 aa11.22□□□□□ -0.61
NUP188-211ENST00000550219 RGP1Q92546 391 aaPredicted RBP11.22□□□□□ -0.61
NUP188-211ENST00000550219 SSBP3Q9BWW4 388 aaPredicted RBP11.22□□□□□ -0.61
NUP188-211ENST00000550219 MS4A7Q9GZW8 240 aaPredicted RBP11.22□□□□□ -0.61
NUP188-211ENST00000550219 COMMD4Q9H0A8 199 aa11.22□□□□□ -0.61
NUP188-211ENST00000550219 SCOCQ9UIL1 159 aa11.22□□□□□ -0.61
NUP188-211ENST00000550219 V9GYS6 101 aa11.22□□□□□ -0.61
NUP188-211ENST00000550219 TRAV40A0A0B4J280 105 aa11.21□□□□□ -0.61
NUP188-211ENST00000550219 TRBV5-5A0A0J9YX44 114 aa11.21□□□□□ -0.61
NUP188-211ENST00000550219 PNMA8CA0A1B0GUJ8 204 aa11.21□□□□□ -0.61
NUP188-211ENST00000550219 LOC107986453A0A1B0GWG9 222 aa11.21□□□□□ -0.61
NUP188-211ENST00000550219 DHRS7CA6NNS2 312 aa11.21□□□□□ -0.61
NUP188-211ENST00000550219 CCRL2O00421 344 aa11.21□□□□□ -0.61
NUP188-211ENST00000550219 DHRS3O75911 302 aa11.21□□□□□ -0.61
NUP188-211ENST00000550219 HLA-DPB1P04440 258 aa11.21□□□□□ -0.61
NUP188-211ENST00000550219 EGR1P18146 543 aa11.21□□□□□ -0.61
NUP188-211ENST00000550219 GSK3AP49840 483 aa11.21□□□□□ -0.61
NUP188-211ENST00000550219 BAMBIQ13145 260 aa11.21□□□□□ -0.61
NUP188-211ENST00000550219 YIF1BQ5BJH7 314 aa11.21□□□□□ -0.61
NUP188-211ENST00000550219 FAM201AQ5SY85 155 aa11.21□□□□□ -0.61
NUP188-211ENST00000550219 PGAP1Q75T13 922 aa11.21□□□□□ -0.61
NUP188-211ENST00000550219 DOK3Q7L591 496 aa11.21□□□□□ -0.61
NUP188-211ENST00000550219 MS4A15Q8N5U1 240 aa11.21□□□□□ -0.61
NUP188-211ENST00000550219 OR14K1Q8NGZ2 314 aa11.21□□□□□ -0.61
NUP188-211ENST00000550219 OR10AC1Q8NH08 325 aa11.21□□□□□ -0.61
NUP188-211ENST00000550219 ZNF48Q96MX3 618 aaPredicted RBP11.21□□□□□ -0.61
NUP188-211ENST00000550219 NDUFB11Q9NX14 153 aa11.21□□□□□ -0.61
NUP188-211ENST00000550219 HHLA2Q9UM44 414 aa11.21□□□□□ -0.61
NUP188-211ENST00000550219 ARHGAP32A7KAX9 2087 aa11.21□□□□□ -0.62
NUP188-211ENST00000550219 A0A1B0GVI7 797 aa11.2□□□□□ -0.62
NUP188-211ENST00000550219 LRRC30A6NM36 301 aa11.2□□□□□ -0.62
NUP188-211ENST00000550219 IQCF6A8MYZ5 107 aa11.2□□□□□ -0.62
NUP188-211ENST00000550219 IFNL4K9M1U5 179 aa11.2□□□□□ -0.62
NUP188-211ENST00000550219 SYT7O43581 403 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms