RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 FAM89BQ8N5H3 189 aa12.06□□□□□ -0.48
HDAC7-228ENST00000548938 SEMA6DQ8NFY4 1073 aa12.06□□□□□ -0.48
HDAC7-228ENST00000548938 TCTEX1D2Q8WW35 142 aa12.06□□□□□ -0.48
HDAC7-228ENST00000548938 TMEM234Q8WY98 164 aa12.06□□□□□ -0.48
HDAC7-228ENST00000548938 PECRQ9BY49 303 aa12.06□□□□□ -0.48
HDAC7-228ENST00000548938 MOB1AQ9H8S9 216 aa12.06□□□□□ -0.48
HDAC7-228ENST00000548938 SERINC1Q9NRX5 453 aa12.06□□□□□ -0.48
HDAC7-228ENST00000548938 PCDH15Q96QU1 1955 aa12.06□□□□□ -0.48
HDAC7-228ENST00000548938 A0A1B0GV50 99 aa12.06□□□□□ -0.48
HDAC7-228ENST00000548938 C5orf63A6NC05 138 aa12.06□□□□□ -0.48
HDAC7-228ENST00000548938 NPIPB13A6NJU9 1138 aa12.06□□□□□ -0.48
HDAC7-228ENST00000548938 FOXI3A8MTJ6 420 aaPredicted RBP12.06□□□□□ -0.48
HDAC7-228ENST00000548938 NPIPB4C9JG80 1138 aa12.06□□□□□ -0.48
HDAC7-228ENST00000548938 AP4M1O00189 453 aa12.06□□□□□ -0.48
HDAC7-228ENST00000548938 RER1O15258 196 aa12.06□□□□□ -0.48
HDAC7-228ENST00000548938 ZNF84P51523 738 aa12.06□□□□□ -0.48
HDAC7-228ENST00000548938 FOXF1Q12946 379 aa12.06□□□□□ -0.48
HDAC7-228ENST00000548938 SURF2Q15527 256 aaPredicted RBP12.06□□□□□ -0.48
HDAC7-228ENST00000548938 FAM57BQ71RH2 274 aa12.06□□□□□ -0.48
HDAC7-228ENST00000548938 ZNF441Q8N8Z8 693 aa12.06□□□□□ -0.48
HDAC7-228ENST00000548938 OR1N1Q8NGS0 311 aa12.06□□□□□ -0.48
HDAC7-228ENST00000548938 CD300LFQ8TDQ1 290 aa12.06□□□□□ -0.48
HDAC7-228ENST00000548938 SHDQ96IW2 340 aa12.06□□□□□ -0.48
HDAC7-228ENST00000548938 ZNF2Q9BSG1 426 aaPredicted RBP12.06□□□□□ -0.48
HDAC7-228ENST00000548938 WFDC1Q9HC57 220 aa12.06□□□□□ -0.48
HDAC7-228ENST00000548938 KLHL13Q9P2N7 655 aa12.06□□□□□ -0.48
HDAC7-228ENST00000548938 B3GAT1Q9P2W7 334 aa12.06□□□□□ -0.48
HDAC7-228ENST00000548938 SUSD2Q9UGT4 822 aa12.06□□□□□ -0.48
HDAC7-228ENST00000548938 FBXO7Q9Y3I1 522 aa12.06□□□□□ -0.48
HDAC7-228ENST00000548938 DHRS7CA6NNS2 312 aa12.05□□□□□ -0.48
HDAC7-228ENST00000548938 PPIHO43447 177 aaKnown RBP12.05□□□□□ -0.48
HDAC7-228ENST00000548938 DANCRP0C864 163 aa12.05□□□□□ -0.48
HDAC7-228ENST00000548938 SERPINA2P20848 420 aa12.05□□□□□ -0.48
HDAC7-228ENST00000548938 CAMLGP49069 296 aa12.05□□□□□ -0.48
HDAC7-228ENST00000548938 STARD6P59095 220 aa12.05□□□□□ -0.48
HDAC7-228ENST00000548938 ZNF239Q16600 458 aaKnown RBP12.05□□□□□ -0.48
HDAC7-228ENST00000548938 NSUN5P2Q63ZY6 315 aa12.05□□□□□ -0.48
HDAC7-228ENST00000548938 CRIP3Q6Q6R5 217 aa12.05□□□□□ -0.48
HDAC7-228ENST00000548938 LANCL3Q6ZV70 420 aa12.05□□□□□ -0.48
HDAC7-228ENST00000548938 SULF2Q8IWU5 870 aa12.05□□□□□ -0.48
HDAC7-228ENST00000548938 TMEM156Q8N614 296 aa12.05□□□□□ -0.48
HDAC7-228ENST00000548938 KDF1Q8NAX2 398 aaPredicted RBP12.05□□□□□ -0.48
HDAC7-228ENST00000548938 OR2AJ1Q8NGZ0 328 aa12.05□□□□□ -0.48
HDAC7-228ENST00000548938 SSC4DQ8WTU2 575 aa12.05□□□□□ -0.48
HDAC7-228ENST00000548938 LIN37Q96GY3 246 aaPredicted RBP12.05□□□□□ -0.48
HDAC7-228ENST00000548938 TPSD1Q9BZJ3 242 aa12.05□□□□□ -0.48
HDAC7-228ENST00000548938 SH3BGRL3Q9H299 93 aa12.05□□□□□ -0.48
HDAC7-228ENST00000548938 E9PLN8 166 aa12.05□□□□□ -0.48
HDAC7-228ENST00000548938 NDUFS6O75380 124 aaKnown RBP12.05□□□□□ -0.48
HDAC7-228ENST00000548938 UCP2P55851 309 aa12.05□□□□□ -0.48
HDAC7-228ENST00000548938 SGPP2Q8IWX5 399 aa12.05□□□□□ -0.48
HDAC7-228ENST00000548938 TSTD1Q8NFU3 115 aa12.05□□□□□ -0.48
HDAC7-228ENST00000548938 HDHD3Q9BSH5 251 aaPredicted RBP12.05□□□□□ -0.48
HDAC7-228ENST00000548938 MRPL13Q9BYD1 178 aaKnown RBP12.05□□□□□ -0.48
HDAC7-228ENST00000548938 ARV1Q9H2C2 271 aa12.05□□□□□ -0.48
HDAC7-228ENST00000548938 MCTS1Q9ULC4 181 aaKnown RBP12.05□□□□□ -0.48
HDAC7-228ENST00000548938 COLQQ9Y215 455 aaPredicted RBP12.05□□□□□ -0.48
HDAC7-228ENST00000548938 LIPT2A6NK58 231 aa12.04□□□□□ -0.48
HDAC7-228ENST00000548938 XRCC2O43543 280 aa12.04□□□□□ -0.48
HDAC7-228ENST00000548938 IFNA21P01568 189 aa12.04□□□□□ -0.48
HDAC7-228ENST00000548938 MBPP02686 304 aaPredicted RBP12.04□□□□□ -0.48
HDAC7-228ENST00000548938 OPN1LWP04000 364 aa12.04□□□□□ -0.48
HDAC7-228ENST00000548938 OR13C7P0DN81 318 aa12.04□□□□□ -0.48
HDAC7-228ENST00000548938 FBXW4P57775 412 aa12.04□□□□□ -0.48
HDAC7-228ENST00000548938 KISS1Q15726 138 aa12.04□□□□□ -0.48
HDAC7-228ENST00000548938 CARD17Q5XLA6 110 aa12.04□□□□□ -0.48
HDAC7-228ENST00000548938 COMMD1Q8N668 190 aa12.04□□□□□ -0.48
HDAC7-228ENST00000548938 ZNF565Q8N9K5 539 aa12.04□□□□□ -0.48
HDAC7-228ENST00000548938 OR1J1Q8NGS3 322 aa12.04□□□□□ -0.48
HDAC7-228ENST00000548938 HLA-CQ95604 372 aa12.04□□□□□ -0.48
HDAC7-228ENST00000548938 GNRHR2Q96P88 292 aa12.04□□□□□ -0.48
HDAC7-228ENST00000548938 C19orf12Q9NSK7 152 aa12.04□□□□□ -0.48
HDAC7-228ENST00000548938 LUZP4Q9P127 313 aa12.04□□□□□ -0.48
HDAC7-228ENST00000548938 COL5A1P20908 1838 aaPredicted RBP12.04□□□□□ -0.48
HDAC7-228ENST00000548938 IGHV3-20A0A0C4DH32 117 aa12.04□□□□□ -0.48
HDAC7-228ENST00000548938 ANKUB1A6NFN9 424 aa12.04□□□□□ -0.48
HDAC7-228ENST00000548938 TLCD2A6NGC4 264 aa12.04□□□□□ -0.48
HDAC7-228ENST00000548938 CRYM-AS1A6NIL9 109 aa12.04□□□□□ -0.48
HDAC7-228ENST00000548938 YKT6O15498 198 aa12.04□□□□□ -0.48
HDAC7-228ENST00000548938 DIRAS3O95661 229 aa12.04□□□□□ -0.48
HDAC7-228ENST00000548938 FBP1P09467 338 aa12.04□□□□□ -0.48
HDAC7-228ENST00000548938 PRF1P14222 555 aa12.04□□□□□ -0.48
HDAC7-228ENST00000548938 CLRN1P58418 232 aa12.04□□□□□ -0.48
HDAC7-228ENST00000548938 RHEBQ15382 184 aa12.04□□□□□ -0.48
HDAC7-228ENST00000548938 RPUSD3Q6P087 351 aaKnown RBP12.04□□□□□ -0.48
HDAC7-228ENST00000548938 SHISA6Q6ZSJ9 500 aa12.04□□□□□ -0.48
HDAC7-228ENST00000548938 C6orf201Q7Z4U5 140 aa12.04□□□□□ -0.48
HDAC7-228ENST00000548938 SLC22A8Q8TCC7 542 aa12.04□□□□□ -0.48
HDAC7-228ENST00000548938 THAP3Q8WTV1 239 aaPredicted RBP12.04□□□□□ -0.48
HDAC7-228ENST00000548938 ST8SIA1Q92185 356 aa12.04□□□□□ -0.48
HDAC7-228ENST00000548938 MALSU1Q96EH3 234 aa12.04□□□□□ -0.48
HDAC7-228ENST00000548938 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.04□□□□□ -0.48
HDAC7-228ENST00000548938 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.03□□□□□ -0.48
HDAC7-228ENST00000548938 STMND1H3BQB6 276 aa12.03□□□□□ -0.48
HDAC7-228ENST00000548938 ZNF205O95201 554 aa12.03□□□□□ -0.48
HDAC7-228ENST00000548938 PRH1P02810 166 aa12.03□□□□□ -0.48
HDAC7-228ENST00000548938 SEC11BP0C7V7 166 aa12.03□□□□□ -0.48
HDAC7-228ENST00000548938 NME1P15531 152 aaKnown RBP12.03□□□□□ -0.48
HDAC7-228ENST00000548938 FASLGP48023 281 aa12.03□□□□□ -0.48
HDAC7-228ENST00000548938 GABREP78334 506 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms