RNA–Protein interactions for RNA: ENST00000548877.1

CDX2-202, Transcript of caudal type homeobox 2, humanhuman

TSL 3

Gene CDX2, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-202ENST00000548877 FAM234AQ9H0X4 552 aa11.04□□□□□ -0.64
CDX2-202ENST00000548877 RBM38Q9H0Z9 239 aaKnown RBP11.04□□□□□ -0.64
CDX2-202ENST00000548877 MEGF9Q9H1U4 602 aa11.04□□□□□ -0.64
CDX2-202ENST00000548877 RAB18Q9NP72 206 aa11.04□□□□□ -0.64
CDX2-202ENST00000548877 PNRC2Q9NPJ4 139 aaKnown RBP11.04□□□□□ -0.64
CDX2-202ENST00000548877 TBC1D23Q9NUY8 699 aa11.04□□□□□ -0.64
CDX2-202ENST00000548877 ONECUT1Q9UBC0 465 aa11.04□□□□□ -0.64
CDX2-202ENST00000548877 BAIAP2Q9UQB8 552 aa11.04□□□□□ -0.64
CDX2-202ENST00000548877 SIGLEC7Q9Y286 467 aa11.04□□□□□ -0.64
CDX2-202ENST00000548877 MEIOCA2RUB1 952 aa11.03□□□□□ -0.64
CDX2-202ENST00000548877 ADARB2-AS1A8MUL3 147 aa11.03□□□□□ -0.64
CDX2-202ENST00000548877 F5H5K5 113 aa11.03□□□□□ -0.64
CDX2-202ENST00000548877 H3BUX3 64 aa11.03□□□□□ -0.64
CDX2-202ENST00000548877 DCTN6O00399 190 aa11.03□□□□□ -0.64
CDX2-202ENST00000548877 NDUFB2O95178 105 aa11.03□□□□□ -0.64
CDX2-202ENST00000548877 LCATP04180 440 aa11.03□□□□□ -0.64
CDX2-202ENST00000548877 CDKN2AP42771 156 aaKnown RBP11.03□□□□□ -0.64
CDX2-202ENST00000548877 GPR4P46093 362 aa11.03□□□□□ -0.64
CDX2-202ENST00000548877 NEDD8Q15843 81 aa11.03□□□□□ -0.64
CDX2-202ENST00000548877 SNAPC1Q16533 368 aa11.03□□□□□ -0.64
CDX2-202ENST00000548877 MEP1BQ16820 701 aa11.03□□□□□ -0.64
CDX2-202ENST00000548877 NCR3LG1Q68D85 454 aa11.03□□□□□ -0.64
CDX2-202ENST00000548877 SLC36A1Q7Z2H8 476 aa11.03□□□□□ -0.64
CDX2-202ENST00000548877 MRPL21Q7Z2W9 205 aaKnown RBP11.03□□□□□ -0.64
CDX2-202ENST00000548877 NDUFA11Q86Y39 141 aa11.03□□□□□ -0.64
CDX2-202ENST00000548877 C11orf53Q8IXP5 236 aa11.03□□□□□ -0.64
CDX2-202ENST00000548877 OR2T33Q8NG76 320 aa11.03□□□□□ -0.64
CDX2-202ENST00000548877 OR13F1Q8NGS4 319 aa11.03□□□□□ -0.64
CDX2-202ENST00000548877 RFKQ969G6 155 aa11.03□□□□□ -0.64
CDX2-202ENST00000548877 MUL1Q969V5 352 aa11.03□□□□□ -0.64
CDX2-202ENST00000548877 C12orf43Q96C57 262 aaKnown RBP11.03□□□□□ -0.64
CDX2-202ENST00000548877 AJUBAQ96IF1 538 aa11.03□□□□□ -0.64
CDX2-202ENST00000548877 TSC22D3Q99576 134 aa11.03□□□□□ -0.64
CDX2-202ENST00000548877 RERGLQ9H628 205 aa11.03□□□□□ -0.64
CDX2-202ENST00000548877 FKBP14Q9NWM8 211 aa11.03□□□□□ -0.64
CDX2-202ENST00000548877 TVP23BQ9NYZ1 205 aa11.03□□□□□ -0.64
CDX2-202ENST00000548877 CYB5R1Q9UHQ9 305 aa11.03□□□□□ -0.64
CDX2-202ENST00000548877 A0A1B0GW55 424 aa11.02□□□□□ -0.65
CDX2-202ENST00000548877 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.02□□□□□ -0.65
CDX2-202ENST00000548877 M0R1W7 72 aa11.02□□□□□ -0.65
CDX2-202ENST00000548877 CDK1P06493 297 aa11.02□□□□□ -0.65
CDX2-202ENST00000548877 DUX4L2P0CJ85 424 aa11.02□□□□□ -0.65
CDX2-202ENST00000548877 DUX4L3P0CJ86 424 aa11.02□□□□□ -0.65
CDX2-202ENST00000548877 DUX4L4P0CJ87 422 aa11.02□□□□□ -0.65
CDX2-202ENST00000548877 DUX4L5P0CJ88 424 aa11.02□□□□□ -0.65
CDX2-202ENST00000548877 DUX4L6P0CJ89 424 aa11.02□□□□□ -0.65
CDX2-202ENST00000548877 DUX4L7P0CJ90 424 aa11.02□□□□□ -0.65
CDX2-202ENST00000548877 AMY2BP19961 511 aa11.02□□□□□ -0.65
CDX2-202ENST00000548877 OTX1P32242 354 aaPredicted RBP11.02□□□□□ -0.65
CDX2-202ENST00000548877 GRK5P34947 590 aa11.02□□□□□ -0.65
CDX2-202ENST00000548877 TMBIM6P55061 237 aa11.02□□□□□ -0.65
CDX2-202ENST00000548877 TPTEP56180 551 aa11.02□□□□□ -0.65
CDX2-202ENST00000548877 ZNF92Q03936 586 aa11.02□□□□□ -0.65
CDX2-202ENST00000548877 KLRD1Q13241 179 aa11.02□□□□□ -0.65
CDX2-202ENST00000548877 TBCEQ15813 527 aaPredicted RBP11.02□□□□□ -0.65
CDX2-202ENST00000548877 PCK2Q16822 640 aa11.02□□□□□ -0.65
CDX2-202ENST00000548877 MICBQ29980 383 aa11.02□□□□□ -0.65
CDX2-202ENST00000548877 CNPY1Q3B7I2 92 aa11.02□□□□□ -0.65
CDX2-202ENST00000548877 WDR38Q5JTN6 314 aa11.02□□□□□ -0.65
CDX2-202ENST00000548877 TMEM236Q5W0B7 351 aa11.02□□□□□ -0.65
CDX2-202ENST00000548877 C11orf87Q6NUJ2 197 aa11.02□□□□□ -0.65
CDX2-202ENST00000548877 DNM1P34Q6PK57 102 aa11.02□□□□□ -0.65
CDX2-202ENST00000548877 DUX4L9Q6RFH8 374 aaPredicted RBP11.02□□□□□ -0.65
CDX2-202ENST00000548877 DPY19L2P2Q6ZN68 376 aa11.02□□□□□ -0.65
CDX2-202ENST00000548877 LIAT1Q6ZQX7 453 aa11.02□□□□□ -0.65
CDX2-202ENST00000548877 AHSA2Q719I0 299 aa11.02□□□□□ -0.65
CDX2-202ENST00000548877 Q8N2B8 174 aa11.02□□□□□ -0.65
CDX2-202ENST00000548877 OR4F17Q8NGA8 305 aa11.02□□□□□ -0.65
CDX2-202ENST00000548877 TMEM163Q8TC26 289 aa11.02□□□□□ -0.65
CDX2-202ENST00000548877 FANK1Q8TC84 345 aa11.02□□□□□ -0.65
CDX2-202ENST00000548877 ITPKCQ96DU7 683 aa11.02□□□□□ -0.65
CDX2-202ENST00000548877 TSSK2Q96PF2 358 aa11.02□□□□□ -0.65
CDX2-202ENST00000548877 OR4F4Q96R69 305 aa11.02□□□□□ -0.65
CDX2-202ENST00000548877 CCL13Q99616 98 aa11.02□□□□□ -0.65
CDX2-202ENST00000548877 SSX3Q99909 188 aa11.02□□□□□ -0.65
CDX2-202ENST00000548877 TSSK6Q9BXA6 273 aa11.02□□□□□ -0.65
CDX2-202ENST00000548877 DNTTIP1Q9H147 329 aa11.02□□□□□ -0.65
CDX2-202ENST00000548877 MMP28Q9H239 520 aa11.02□□□□□ -0.65
CDX2-202ENST00000548877 C14orf119Q9NWQ9 140 aa11.02□□□□□ -0.65
CDX2-202ENST00000548877 PTTG2Q9NZH5 202 aa11.02□□□□□ -0.65
CDX2-202ENST00000548877 DUX4Q9UBX2 424 aa11.02□□□□□ -0.65
CDX2-202ENST00000548877 B9D1Q9UPM9 204 aa11.02□□□□□ -0.65
CDX2-202ENST00000548877 CEPT1Q9Y6K0 416 aa11.02□□□□□ -0.65
CDX2-202ENST00000548877 IGHV3OR15-7A0A075B7D8 119 aa11.01□□□□□ -0.65
CDX2-202ENST00000548877 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.01□□□□□ -0.65
CDX2-202ENST00000548877 K7EIL1 84 aa11.01□□□□□ -0.65
CDX2-202ENST00000548877 FBXO24O75426 580 aa11.01□□□□□ -0.65
CDX2-202ENST00000548877 GRPP07492 148 aa11.01□□□□□ -0.65
CDX2-202ENST00000548877 HTR1AP08908 422 aa11.01□□□□□ -0.65
CDX2-202ENST00000548877 DCKP27707 260 aa11.01□□□□□ -0.65
CDX2-202ENST00000548877 DLX1P56177 255 aa11.01□□□□□ -0.65
CDX2-202ENST00000548877 FXYD6P3P58550 94 aa11.01□□□□□ -0.65
CDX2-202ENST00000548877 POU4F2Q12837 409 aa11.01□□□□□ -0.65
CDX2-202ENST00000548877 SMN1Q16637 294 aaKnown RBP11.01□□□□□ -0.65
CDX2-202ENST00000548877 KLHL22Q53GT1 634 aa11.01□□□□□ -0.65
CDX2-202ENST00000548877 RNLSQ5VYX0 342 aa11.01□□□□□ -0.65
CDX2-202ENST00000548877 XAF1Q6GPH4 301 aa11.01□□□□□ -0.65
CDX2-202ENST00000548877 HCP5Q6MZN7 132 aa11.01□□□□□ -0.65
CDX2-202ENST00000548877 SMARCD3Q6STE5 483 aa11.01□□□□□ -0.65
CDX2-202ENST00000548877 CLVS1Q8IUQ0 354 aaPredicted RBP11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms