RNA–Protein interactions for RNA: ENST00000548771.1

CCDC38-206, Transcript of coiled-coil domain containing 38, humanhuman

TSL 3

Gene CCDC38, Length 470 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-206ENST00000548771 THOC7Q6I9Y2 204 aaKnown RBP1.22□□□□□ -2.21
CCDC38-206ENST00000548771 NDUFAF7Q7L592 441 aa1.22□□□□□ -2.21
CCDC38-206ENST00000548771 MICU2Q8IYU8 434 aa1.22□□□□□ -2.21
CCDC38-206ENST00000548771 INO80EQ8NBZ0 244 aaPredicted RBP1.22□□□□□ -2.21
CCDC38-206ENST00000548771 LY6G5BQ8NDX9 201 aa1.22□□□□□ -2.21
CCDC38-206ENST00000548771 OR8K3Q8NH51 312 aa1.22□□□□□ -2.21
CCDC38-206ENST00000548771 ING5Q8WYH8 240 aa1.22□□□□□ -2.21
CCDC38-206ENST00000548771 FAM19A4Q96LR4 140 aa1.22□□□□□ -2.21
CCDC38-206ENST00000548771 OPALINQ96PE5 141 aa1.22□□□□□ -2.21
CCDC38-206ENST00000548771 DERL3Q96Q80 235 aa1.22□□□□□ -2.21
CCDC38-206ENST00000548771 STACQ99469 402 aa1.22□□□□□ -2.21
CCDC38-206ENST00000548771 NAPGQ99747 312 aaPredicted RBP1.22□□□□□ -2.21
CCDC38-206ENST00000548771 AGMATQ9BSE5 352 aa1.22□□□□□ -2.21
CCDC38-206ENST00000548771 VSIRQ9H7M9 311 aa1.22□□□□□ -2.21
CCDC38-206ENST00000548771 AUNIPQ9H7T9 357 aa1.22□□□□□ -2.21
CCDC38-206ENST00000548771 PXMP2Q9NR77 195 aa1.22□□□□□ -2.21
CCDC38-206ENST00000548771 DDX19BQ9UMR2 479 aa1.22□□□□□ -2.21
CCDC38-206ENST00000548771 PPIL1Q9Y3C6 166 aa1.22□□□□□ -2.21
CCDC38-206ENST00000548771 PRRC2BQ5JSZ5 2229 aaKnown RBP1.21□□□□□ -2.21
CCDC38-206ENST00000548771 HACD1B0YJ81 288 aa1.21□□□□□ -2.22
CCDC38-206ENST00000548771 LINC01619G3V211 115 aa1.21□□□□□ -2.22
CCDC38-206ENST00000548771 AQP9O43315 295 aa1.21□□□□□ -2.22
CCDC38-206ENST00000548771 LCA5LO95447 670 aa1.21□□□□□ -2.22
CCDC38-206ENST00000548771 TTC4O95801 387 aa1.21□□□□□ -2.22
CCDC38-206ENST00000548771 CXorf1O96002 111 aa1.21□□□□□ -2.22
CCDC38-206ENST00000548771 CDK1P06493 297 aa1.21□□□□□ -2.22
CCDC38-206ENST00000548771 OR8G3PP0DMU2 310 aa1.21□□□□□ -2.22
CCDC38-206ENST00000548771 IL18Q14116 193 aa1.21□□□□□ -2.22
CCDC38-206ENST00000548771 PDZD11Q5EBL8 140 aa1.21□□□□□ -2.22
CCDC38-206ENST00000548771 ZNF470Q6ECI4 717 aa1.21□□□□□ -2.22
CCDC38-206ENST00000548771 WDR59Q6PJI9 974 aa1.21□□□□□ -2.22
CCDC38-206ENST00000548771 ANGPTL8Q6UXH0 198 aa1.21□□□□□ -2.22
CCDC38-206ENST00000548771 FAM43BQ6ZT52 329 aaPredicted RBP1.21□□□□□ -2.22
CCDC38-206ENST00000548771 FA2HQ7L5A8 372 aa1.21□□□□□ -2.22
CCDC38-206ENST00000548771 ITPRIPQ8IWB1 547 aa1.21□□□□□ -2.22
CCDC38-206ENST00000548771 KIF2BQ8N4N8 673 aa1.21□□□□□ -2.22
CCDC38-206ENST00000548771 ISG20Q96AZ6 181 aaKnown RBP1.21□□□□□ -2.22
CCDC38-206ENST00000548771 PEBP4Q96S96 227 aa1.21□□□□□ -2.22
CCDC38-206ENST00000548771 DEFB129Q9H1M3 183 aa1.21□□□□□ -2.22
CCDC38-206ENST00000548771 EXO5Q9H790 373 aa1.21□□□□□ -2.22
CCDC38-206ENST00000548771 SND1-IT1Q9HBX3 110 aa1.21□□□□□ -2.22
CCDC38-206ENST00000548771 LYRM4Q9HD34 91 aa1.21□□□□□ -2.22
CCDC38-206ENST00000548771 OR51B2Q9Y5P1 312 aa1.21□□□□□ -2.22
CCDC38-206ENST00000548771 LOXHD1Q8IVV2 1947 aa1.21□□□□□ -2.22
CCDC38-206ENST00000548771 TRAV8-6A0A0B4J262 113 aa1.2□□□□□ -2.22
CCDC38-206ENST00000548771 SIVA1O15304 175 aa1.2□□□□□ -2.22
CCDC38-206ENST00000548771 SYNGR2O43760 224 aa1.2□□□□□ -2.22
CCDC38-206ENST00000548771 FARS2O95363 451 aaKnown RBP1.2□□□□□ -2.22
CCDC38-206ENST00000548771 SLC35G6P0C7Q6 338 aa1.2□□□□□ -2.22
CCDC38-206ENST00000548771 SEC11BP0C7V7 166 aa1.2□□□□□ -2.22
CCDC38-206ENST00000548771 HLA-GP17693 338 aa1.2□□□□□ -2.22
CCDC38-206ENST00000548771 PRPS1L1P21108 318 aa1.2□□□□□ -2.22
CCDC38-206ENST00000548771 CD82P27701 267 aa1.2□□□□□ -2.22
CCDC38-206ENST00000548771 ARL2P36404 184 aa1.2□□□□□ -2.22
CCDC38-206ENST00000548771 MAGEA1P43355 309 aa1.2□□□□□ -2.22
CCDC38-206ENST00000548771 RPS5P46782 204 aaKnown RBP1.2□□□□□ -2.22
CCDC38-206ENST00000548771 TUFMP49411 452 aaKnown RBP1.2□□□□□ -2.22
CCDC38-206ENST00000548771 PSMB2P49721 201 aa1.2□□□□□ -2.22
CCDC38-206ENST00000548771 NUDT2P50583 147 aa1.2□□□□□ -2.22
CCDC38-206ENST00000548771 MTPNP58546 118 aa1.2□□□□□ -2.22
CCDC38-206ENST00000548771 ATP6V0D1P61421 351 aa1.2□□□□□ -2.22
CCDC38-206ENST00000548771 YWHAEP62258 255 aaKnown RBP1.2□□□□□ -2.22
CCDC38-206ENST00000548771 SLC35A1P78382 337 aa1.2□□□□□ -2.22
CCDC38-206ENST00000548771 IL5RAQ01344 420 aa1.2□□□□□ -2.22
CCDC38-206ENST00000548771 IRF8Q02556 426 aa1.2□□□□□ -2.22
CCDC38-206ENST00000548771 C5orf64Q2M2E5 130 aa1.2□□□□□ -2.22
CCDC38-206ENST00000548771 LGALSLQ3ZCW2 172 aaPredicted RBP1.2□□□□□ -2.22
CCDC38-206ENST00000548771 MRPL2Q5T653 305 aaKnown RBP1.2□□□□□ -2.22
CCDC38-206ENST00000548771 TTC19Q6DKK2 380 aaPredicted RBP1.2□□□□□ -2.22
CCDC38-206ENST00000548771 FAM122BQ7Z309 247 aa1.2□□□□□ -2.22
CCDC38-206ENST00000548771 TRAM1L1Q8N609 369 aa1.2□□□□□ -2.22
CCDC38-206ENST00000548771 ZFP62Q8NB50 900 aaPredicted RBP1.2□□□□□ -2.22
CCDC38-206ENST00000548771 CYB561A3Q8NBI2 242 aa1.2□□□□□ -2.22
CCDC38-206ENST00000548771 OR2M7Q8NG81 312 aa1.2□□□□□ -2.22
CCDC38-206ENST00000548771 ITLN2Q8WWU7 325 aaPredicted RBP1.2□□□□□ -2.22
CCDC38-206ENST00000548771 ISOC2Q96AB3 205 aa1.2□□□□□ -2.22
CCDC38-206ENST00000548771 UBE2E2Q96LR5 201 aa1.2□□□□□ -2.22
CCDC38-206ENST00000548771 CSPG4P5Q96PW8 444 aa1.2□□□□□ -2.22
CCDC38-206ENST00000548771 NAA50Q9GZZ1 169 aaKnown RBP1.2□□□□□ -2.22
CCDC38-206ENST00000548771 STMN4Q9H169 189 aaPredicted RBP1.2□□□□□ -2.22
CCDC38-206ENST00000548771 ARV1Q9H2C2 271 aa1.2□□□□□ -2.22
CCDC38-206ENST00000548771 CLSTN2Q9H4D0 955 aa1.2□□□□□ -2.22
CCDC38-206ENST00000548771 CYP3A43Q9HB55 503 aa1.2□□□□□ -2.22
CCDC38-206ENST00000548771 CD209Q9NNX6 404 aa1.2□□□□□ -2.22
CCDC38-206ENST00000548771 FAM60AQ9NP50 221 aa1.2□□□□□ -2.22
CCDC38-206ENST00000548771 NLE1Q9NVX2 485 aaPredicted RBP1.2□□□□□ -2.22
CCDC38-206ENST00000548771 AHSPQ9NZD4 102 aa1.2□□□□□ -2.22
CCDC38-206ENST00000548771 JCADQ9P266 1359 aa1.2□□□□□ -2.22
CCDC38-206ENST00000548771 ZNF608Q9ULD9 1512 aaPredicted RBP1.2□□□□□ -2.22
CCDC38-206ENST00000548771 ELP1O95163 1332 aa1.19□□□□□ -2.22
CCDC38-206ENST00000548771 IGLV10-54A0A075B6I4 117 aa1.19□□□□□ -2.22
CCDC38-206ENST00000548771 TRAV8-4A0A0B4J246 113 aa1.19□□□□□ -2.22
CCDC38-206ENST00000548771 A0A0B4J2E0 115 aa1.19□□□□□ -2.22
CCDC38-206ENST00000548771 SDHAF1A6NFY7 115 aa1.19□□□□□ -2.22
CCDC38-206ENST00000548771 GOLGA8TH3BQL2 631 aa1.19□□□□□ -2.22
CCDC38-206ENST00000548771 CASQ2O14958 399 aaPredicted RBP1.19□□□□□ -2.22
CCDC38-206ENST00000548771 NPHP4O75161 1426 aaPredicted RBP1.19□□□□□ -2.22
CCDC38-206ENST00000548771 CPSF4O95639 269 aaKnown RBP1.19□□□□□ -2.22
CCDC38-206ENST00000548771 P01737 135 aa1.19□□□□□ -2.22
CCDC38-206ENST00000548771 IGHMP01871 453 aa1.19□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 103.3 ms