RNA–Protein interactions for RNA: ENST00000548658.1

BEST3-209, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-209ENST00000548658 A0A1B0GUS0 222 aa9.4□□□□□ -0.9
BEST3-209ENST00000548658 OR2AT4A6NND4 320 aa9.4□□□□□ -0.9
BEST3-209ENST00000548658 HOXA3O43365 443 aaPredicted RBP9.4□□□□□ -0.9
BEST3-209ENST00000548658 SULT1C4O75897 302 aa9.4□□□□□ -0.9
BEST3-209ENST00000548658 TTRP02766 147 aa9.4□□□□□ -0.9
BEST3-209ENST00000548658 ACAA1P09110 424 aaPredicted RBP9.4□□□□□ -0.9
BEST3-209ENST00000548658 EEF1B2P24534 225 aaKnown RBP9.4□□□□□ -0.9
BEST3-209ENST00000548658 HTR1FP30939 366 aa9.4□□□□□ -0.9
BEST3-209ENST00000548658 CAV3P56539 151 aa9.4□□□□□ -0.9
BEST3-209ENST00000548658 RPL15P61313 204 aaKnown RBP9.4□□□□□ -0.9
BEST3-209ENST00000548658 IKZF1Q13422 519 aa9.4□□□□□ -0.9
BEST3-209ENST00000548658 BLMHQ13867 455 aa9.4□□□□□ -0.9
BEST3-209ENST00000548658 CEP78Q5JTW2 689 aa9.4□□□□□ -0.9
BEST3-209ENST00000548658 CLVS2Q5SYC1 327 aa9.4□□□□□ -0.9
BEST3-209ENST00000548658 PLCXD3Q63HM9 321 aa9.4□□□□□ -0.9
BEST3-209ENST00000548658 HAGHLQ6PII5 290 aaPredicted RBP9.4□□□□□ -0.9
BEST3-209ENST00000548658 BCDIN3DQ7Z5W3 292 aaKnown RBP9.4□□□□□ -0.9
BEST3-209ENST00000548658 FAM216BQ8N7L0 139 aa9.4□□□□□ -0.9
BEST3-209ENST00000548658 CCDC54Q8NEL0 328 aa9.4□□□□□ -0.9
BEST3-209ENST00000548658 OR51G2Q8NGK0 314 aa9.4□□□□□ -0.9
BEST3-209ENST00000548658 C8orf46Q8TAG6 207 aa9.4□□□□□ -0.9
BEST3-209ENST00000548658 SSMEM1Q8WWF3 244 aa9.4□□□□□ -0.9
BEST3-209ENST00000548658 LHX4Q969G2 390 aa9.4□□□□□ -0.9
BEST3-209ENST00000548658 APOL4Q9BPW4 351 aa9.4□□□□□ -0.9
BEST3-209ENST00000548658 DCTN5Q9BTE1 182 aa9.4□□□□□ -0.9
BEST3-209ENST00000548658 SEMA6AQ9H2E6 1030 aa9.4□□□□□ -0.9
BEST3-209ENST00000548658 SNTG1Q9NSN8 517 aa9.4□□□□□ -0.9
BEST3-209ENST00000548658 SLC25A10Q9UBX3 287 aaPredicted RBP9.4□□□□□ -0.9
BEST3-209ENST00000548658 POLDIP2Q9Y2S7 368 aa9.4□□□□□ -0.9
BEST3-209ENST00000548658 SNTNA6NMZ2 147 aa9.39□□□□□ -0.91
BEST3-209ENST00000548658 PRR32B1ATL7 298 aa9.39□□□□□ -0.91
BEST3-209ENST00000548658 SIGLEC5O15389 551 aa9.39□□□□□ -0.91
BEST3-209ENST00000548658 SRSF10O75494 262 aaKnown RBP9.39□□□□□ -0.91
BEST3-209ENST00000548658 RHBDL1O75783 438 aa9.39□□□□□ -0.91
BEST3-209ENST00000548658 FAHP16930 419 aa9.39□□□□□ -0.91
BEST3-209ENST00000548658 AMY2BP19961 511 aa9.39□□□□□ -0.91
BEST3-209ENST00000548658 GABRA2P47869 451 aa9.39□□□□□ -0.91
BEST3-209ENST00000548658 GMFBP60983 142 aa9.39□□□□□ -0.91
BEST3-209ENST00000548658 MFGE8Q08431 387 aaPredicted RBP9.39□□□□□ -0.91
BEST3-209ENST00000548658 SMIM21Q3B7S5 101 aa9.39□□□□□ -0.91
BEST3-209ENST00000548658 TMEM42Q69YG0 159 aa9.39□□□□□ -0.91
BEST3-209ENST00000548658 ZFP1Q6P2D0 407 aa9.39□□□□□ -0.91
BEST3-209ENST00000548658 PLEKHG7Q6ZR37 379 aa9.39□□□□□ -0.91
BEST3-209ENST00000548658 ASRGL1Q7L266 308 aa9.39□□□□□ -0.91
BEST3-209ENST00000548658 VMO1Q7Z5L0 202 aa9.39□□□□□ -0.91
BEST3-209ENST00000548658 YIPF7Q8N8F6 280 aa9.39□□□□□ -0.91
BEST3-209ENST00000548658 AQP3Q92482 292 aa9.39□□□□□ -0.91
BEST3-209ENST00000548658 H1FXQ92522 213 aaKnown RBP9.39□□□□□ -0.91
BEST3-209ENST00000548658 SEH1LQ96EE3 360 aa9.39□□□□□ -0.91
BEST3-209ENST00000548658 MYCBPQ99417 103 aaPredicted RBP9.39□□□□□ -0.91
BEST3-209ENST00000548658 ADI1Q9BV57 179 aa9.39□□□□□ -0.91
BEST3-209ENST00000548658 TTTY10Q9BZA0 68 aa9.39□□□□□ -0.91
BEST3-209ENST00000548658 DPAGT1Q9H3H5 408 aa9.39□□□□□ -0.91
BEST3-209ENST00000548658 RIBC2Q9H4K1 309 aa9.39□□□□□ -0.91
BEST3-209ENST00000548658 ONECUT1Q9UBC0 465 aa9.39□□□□□ -0.91
BEST3-209ENST00000548658 MRM2Q9UI43 246 aaKnown RBP9.39□□□□□ -0.91
BEST3-209ENST00000548658 FAM96BQ9Y3D0 163 aa9.39□□□□□ -0.91
BEST3-209ENST00000548658 V9GYS6 101 aa9.39□□□□□ -0.91
BEST3-209ENST00000548658 ANK2Q01484 3957 aa9.38□□□□□ -0.91
BEST3-209ENST00000548658 TRBV23-1A0A0A0MS06 115 aa9.38□□□□□ -0.91
BEST3-209ENST00000548658 MDFIC2A0A1B0GVS7 189 aa9.38□□□□□ -0.91
BEST3-209ENST00000548658 A0A1W2PPH5 198 aa9.38□□□□□ -0.91
BEST3-209ENST00000548658 A0A1W2PQL4 384 aaPredicted RBP9.38□□□□□ -0.91
BEST3-209ENST00000548658 METTL15A6NJ78 407 aa9.38□□□□□ -0.91
BEST3-209ENST00000548658 M0R129 80 aa9.38□□□□□ -0.91
BEST3-209ENST00000548658 M0R1W7 72 aa9.38□□□□□ -0.91
BEST3-209ENST00000548658 NOS1APO75052 506 aaPredicted RBP9.38□□□□□ -0.91
BEST3-209ENST00000548658 FCN3O75636 299 aa9.38□□□□□ -0.91
BEST3-209ENST00000548658 RPP14O95059 124 aaKnown RBP9.38□□□□□ -0.91
BEST3-209ENST00000548658 SERPINA3P01011 423 aa9.38□□□□□ -0.91
BEST3-209ENST00000548658 PSG2P11465 335 aa9.38□□□□□ -0.91
BEST3-209ENST00000548658 NDUFB7P17568 137 aa9.38□□□□□ -0.91
BEST3-209ENST00000548658 CCL1P22362 96 aa9.38□□□□□ -0.91
BEST3-209ENST00000548658 POLR2IP36954 125 aaKnown RBP9.38□□□□□ -0.91
BEST3-209ENST00000548658 HAAOP46952 286 aa9.38□□□□□ -0.91
BEST3-209ENST00000548658 MEDAGQ5VYS4 303 aa9.38□□□□□ -0.91
BEST3-209ENST00000548658 RUSC1-AS1Q66K80 236 aa9.38□□□□□ -0.91
BEST3-209ENST00000548658 NCR3LG1Q68D85 454 aa9.38□□□□□ -0.91
BEST3-209ENST00000548658 Q6ZSR3 168 aa9.38□□□□□ -0.91
BEST3-209ENST00000548658 CCDC121Q6ZUS5 278 aa9.38□□□□□ -0.91
BEST3-209ENST00000548658 KCTD20Q7Z5Y7 419 aa9.38□□□□□ -0.91
BEST3-209ENST00000548658 OR10H4Q8NGA5 316 aa9.38□□□□□ -0.91
BEST3-209ENST00000548658 OR14K1Q8NGZ2 314 aa9.38□□□□□ -0.91
BEST3-209ENST00000548658 DYRK2Q92630 601 aa9.38□□□□□ -0.91
BEST3-209ENST00000548658 PPP1R14AQ96A00 147 aa9.38□□□□□ -0.91
BEST3-209ENST00000548658 C10orf35Q96D05 121 aa9.38□□□□□ -0.91
BEST3-209ENST00000548658 SDSLQ96GA7 329 aa9.38□□□□□ -0.91
BEST3-209ENST00000548658 GAFA1Q96PS6 74 aa9.38□□□□□ -0.91
BEST3-209ENST00000548658 FGF23Q9GZV9 251 aaPredicted RBP9.38□□□□□ -0.91
BEST3-209ENST00000548658 SLITRK2Q9H156 845 aa9.38□□□□□ -0.91
BEST3-209ENST00000548658 METTL8Q9H825 291 aaKnown RBP9.38□□□□□ -0.91
BEST3-209ENST00000548658 PLEKHA1Q9HB21 404 aa9.38□□□□□ -0.91
BEST3-209ENST00000548658 IMPAD1Q9NX62 359 aa9.38□□□□□ -0.91
BEST3-209ENST00000548658 SLC7A11Q9UPY5 501 aa9.38□□□□□ -0.91
BEST3-209ENST00000548658 PCDHGB1Q9Y5G3 927 aa9.38□□□□□ -0.91
BEST3-209ENST00000548658 MMP24Q9Y5R2 645 aa9.38□□□□□ -0.91
BEST3-209ENST00000548658 SOX21Q9Y651 276 aaPredicted RBP9.38□□□□□ -0.91
BEST3-209ENST00000548658 IGKV1D-17A0A075B6S4 117 aa9.37□□□□□ -0.91
BEST3-209ENST00000548658 A0A1B0GTI1 187 aa9.37□□□□□ -0.91
BEST3-209ENST00000548658 A0A1B0GW55 424 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms