RNA–Protein interactions for RNA: ENST00000548570.1

APP-217, Transcript of amyloid beta precursor protein, human

TSL 2

Gene APP, Length 361 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APP-217	ENST00000548570		M0R233	179 aa		4.21	□□□□□ -1.74
APP-217	ENST00000548570	CDIPT	O14735	213 aa		4.21	□□□□□ -1.74
APP-217	ENST00000548570	TNFRSF13B	O14836	293 aa	Predicted RBP	4.21	□□□□□ -1.74
APP-217	ENST00000548570	MTRF1	O75570	445 aa	Known RBP	4.21	□□□□□ -1.74
APP-217	ENST00000548570	GABARAP	O95166	117 aa		4.21	□□□□□ -1.74
APP-217	ENST00000548570	NRAS	P01111	189 aa		4.21	□□□□□ -1.74
APP-217	ENST00000548570	LHB	P01229	141 aa		4.21	□□□□□ -1.74
APP-217	ENST00000548570	TFF1	P04155	84 aa		4.21	□□□□□ -1.74
APP-217	ENST00000548570	HNRNPC	P07910	306 aa	Known RBP eCLIP	4.21	□□□□□ -1.74
APP-217	ENST00000548570	ATF1	P18846	271 aa		4.21	□□□□□ -1.74
APP-217	ENST00000548570	AMY2B	P19961	511 aa		4.21	□□□□□ -1.74
APP-217	ENST00000548570	MPZ	P25189	248 aa		4.21	□□□□□ -1.74
APP-217	ENST00000548570	AZGP1	P25311	298 aa	Known RBP	4.21	□□□□□ -1.74
APP-217	ENST00000548570	RPL5	P46777	297 aa	Known RBP	4.21	□□□□□ -1.74
APP-217	ENST00000548570	GPM6A	P51674	278 aa		4.21	□□□□□ -1.74
APP-217	ENST00000548570	CAV3	P56539	151 aa		4.21	□□□□□ -1.74
APP-217	ENST00000548570	OR10A3	P58181	314 aa		4.21	□□□□□ -1.74
APP-217	ENST00000548570	ERVK11-1	P61568	191 aa		4.21	□□□□□ -1.74
APP-217	ENST00000548570	NCS1	P62166	190 aa		4.21	□□□□□ -1.74
APP-217	ENST00000548570	SNRPD2	P62316	118 aa	Known RBP	4.21	□□□□□ -1.74
APP-217	ENST00000548570	PLA2G7	Q13093	441 aa		4.21	□□□□□ -1.74
APP-217	ENST00000548570	ZNF154	Q13106	437 aa		4.21	□□□□□ -1.74
APP-217	ENST00000548570	BLMH	Q13867	455 aa		4.21	□□□□□ -1.74
APP-217	ENST00000548570	FAM201A	Q5SY85	155 aa		4.21	□□□□□ -1.74
APP-217	ENST00000548570	C22orf42	Q6IC83	251 aa		4.21	□□□□□ -1.74
APP-217	ENST00000548570	MZT2A	Q6P582	158 aa		4.21	□□□□□ -1.74
APP-217	ENST00000548570	WDR82	Q6UXN9	313 aa		4.21	□□□□□ -1.74
APP-217	ENST00000548570	MOB3C	Q70IA8	216 aa		4.21	□□□□□ -1.74
APP-217	ENST00000548570	BIVM	Q86UB2	503 aa		4.21	□□□□□ -1.74
APP-217	ENST00000548570	COMMD2	Q86X83	199 aa		4.21	□□□□□ -1.74
APP-217	ENST00000548570	ANGPTL5	Q86XS5	388 aa		4.21	□□□□□ -1.74
APP-217	ENST00000548570	ZDHHC23	Q8IYP9	409 aa		4.21	□□□□□ -1.74
APP-217	ENST00000548570	MS4A15	Q8N5U1	240 aa		4.21	□□□□□ -1.74
APP-217	ENST00000548570	GCSAM	Q8N6F7	178 aa		4.21	□□□□□ -1.74
APP-217	ENST00000548570	CCDC54	Q8NEL0	328 aa		4.21	□□□□□ -1.74
APP-217	ENST00000548570	DNAAF1	Q8NEP3	725 aa		4.21	□□□□□ -1.74
APP-217	ENST00000548570	OR5A2	Q8NGI9	324 aa		4.21	□□□□□ -1.74
APP-217	ENST00000548570	OR13G1	Q8NGZ3	307 aa		4.21	□□□□□ -1.74
APP-217	ENST00000548570	ZNF420	Q8TAQ5	688 aa	Predicted RBP	4.21	□□□□□ -1.74
APP-217	ENST00000548570		Q8TCH9	128 aa		4.21	□□□□□ -1.74
APP-217	ENST00000548570	NPRL2	Q8WTW4	380 aa		4.21	□□□□□ -1.74
APP-217	ENST00000548570	TSEN15	Q8WW01	171 aa	Known RBP	4.21	□□□□□ -1.74
APP-217	ENST00000548570	PP6455	Q8WZ26	134 aa		4.21	□□□□□ -1.74
APP-217	ENST00000548570	SLC25A28	Q96A46	364 aa		4.21	□□□□□ -1.74
APP-217	ENST00000548570	C10orf35	Q96D05	121 aa		4.21	□□□□□ -1.74
APP-217	ENST00000548570	ELMOD3	Q96FG2	381 aa		4.21	□□□□□ -1.74
APP-217	ENST00000548570	RHOV	Q96L33	236 aa		4.21	□□□□□ -1.74
APP-217	ENST00000548570	ZNF488	Q96MN9	340 aa		4.21	□□□□□ -1.74
APP-217	ENST00000548570	OR2V2	Q96R30	315 aa		4.21	□□□□□ -1.74
APP-217	ENST00000548570	MYCBP	Q99417	103 aa	Predicted RBP	4.21	□□□□□ -1.74
APP-217	ENST00000548570	COMMD4	Q9H0A8	199 aa		4.21	□□□□□ -1.74
APP-217	ENST00000548570	MS4A5	Q9H3V2	200 aa		4.21	□□□□□ -1.74
APP-217	ENST00000548570	ZCCHC4	Q9H5U6	513 aa		4.21	□□□□□ -1.74
APP-217	ENST00000548570	GCM1	Q9NP62	436 aa		4.21	□□□□□ -1.74
APP-217	ENST00000548570	TREM2	Q9NZC2	230 aa		4.21	□□□□□ -1.74
APP-217	ENST00000548570	MTCH1	Q9NZJ7	389 aa		4.21	□□□□□ -1.74
APP-217	ENST00000548570	IL36RN	Q9UBH0	155 aa		4.21	□□□□□ -1.74
APP-217	ENST00000548570	CGGBP1	Q9UFW8	167 aa	Predicted RBP	4.21	□□□□□ -1.74
APP-217	ENST00000548570	IL19	Q9UHD0	177 aa		4.21	□□□□□ -1.74
APP-217	ENST00000548570	STUB1	Q9UNE7	303 aa		4.21	□□□□□ -1.74
APP-217	ENST00000548570	MPC1	Q9Y5U8	109 aa		4.21	□□□□□ -1.74
APP-217	ENST00000548570	PRR14L	Q5THK1	2151 aa		4.21	□□□□□ -1.74
APP-217	ENST00000548570	OTOG	Q6ZRI0	2925 aa		4.21	□□□□□ -1.74
APP-217	ENST00000548570		A0A0B4J203	849 aa		4.2	□□□□□ -1.74
APP-217	ENST00000548570	TRAV1-2	A0A0B4J238	106 aa		4.2	□□□□□ -1.74
APP-217	ENST00000548570	SMIM30	A4D0T7	59 aa		4.2	□□□□□ -1.74
APP-217	ENST00000548570	DPPA5	A6NC42	116 aa		4.2	□□□□□ -1.74
APP-217	ENST00000548570	TRIM64B	A6NI03	449 aa		4.2	□□□□□ -1.74
APP-217	ENST00000548570	ANKRD30BL	A7E2S9	258 aa		4.2	□□□□□ -1.74
APP-217	ENST00000548570	VWC2L	B2RUY7	222 aa		4.2	□□□□□ -1.74
APP-217	ENST00000548570	ZNF732	B4DXR9	585 aa		4.2	□□□□□ -1.74
APP-217	ENST00000548570	SPRY1	O43609	319 aa	Predicted RBP	4.2	□□□□□ -1.74
APP-217	ENST00000548570	SULT1B1	O43704	296 aa		4.2	□□□□□ -1.74
APP-217	ENST00000548570	ANGPTL7	O43827	346 aa		4.2	□□□□□ -1.74
APP-217	ENST00000548570	CDC14B	O60729	498 aa		4.2	□□□□□ -1.74
APP-217	ENST00000548570	NOS1AP	O75052	506 aa	Predicted RBP	4.2	□□□□□ -1.74
APP-217	ENST00000548570	GATB	O75879	557 aa	Known RBP	4.2	□□□□□ -1.74
APP-217	ENST00000548570	ZNF205	O95201	554 aa		4.2	□□□□□ -1.74
APP-217	ENST00000548570	CYB5R3	P00387	301 aa	Predicted RBP	4.2	□□□□□ -1.74
APP-217	ENST00000548570	RAF1	P04049	648 aa		4.2	□□□□□ -1.74
APP-217	ENST00000548570	MAS1	P04201	325 aa		4.2	□□□□□ -1.74
APP-217	ENST00000548570	ALDOB	P05062	364 aa		4.2	□□□□□ -1.74
APP-217	ENST00000548570	ZNF12	P17014	697 aa		4.2	□□□□□ -1.74
APP-217	ENST00000548570	ZNF20	P17024	532 aa		4.2	□□□□□ -1.74
APP-217	ENST00000548570	SRM	P19623	302 aa		4.2	□□□□□ -1.74
APP-217	ENST00000548570	GAL	P22466	123 aa		4.2	□□□□□ -1.74
APP-217	ENST00000548570	PSMA1	P25786	263 aa	Known RBP	4.2	□□□□□ -1.74
APP-217	ENST00000548570	NPBWR2	P48146	333 aa		4.2	□□□□□ -1.74
APP-217	ENST00000548570	PTH2R	P49190	550 aa		4.2	□□□□□ -1.74
APP-217	ENST00000548570	FUT6	P51993	359 aa		4.2	□□□□□ -1.74
APP-217	ENST00000548570	EFNA4	P52798	201 aa		4.2	□□□□□ -1.74
APP-217	ENST00000548570	VBP1	P61758	197 aa		4.2	□□□□□ -1.74
APP-217	ENST00000548570	LSM3	P62310	102 aa	Known RBP	4.2	□□□□□ -1.74
APP-217	ENST00000548570	QRFP	P83859	136 aa		4.2	□□□□□ -1.74
APP-217	ENST00000548570	TNFAIP6	P98066	277 aa	Predicted RBP	4.2	□□□□□ -1.74
APP-217	ENST00000548570	RIN1	Q13671	783 aa		4.2	□□□□□ -1.74
APP-217	ENST00000548570	SPCS2	Q15005	226 aa		4.2	□□□□□ -1.74
APP-217	ENST00000548570	TESK1	Q15569	626 aa		4.2	□□□□□ -1.74
APP-217	ENST00000548570	OR8G1	Q15617	311 aa		4.2	□□□□□ -1.74
APP-217	ENST00000548570	KISS1	Q15726	138 aa		4.2	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms