RNA–Protein interactions for RNA: ENST00000546898.1

DDX54-204, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-204ENST00000546898 C10orf35Q96D05 121 aa13.19□□□□□ -0.3
DDX54-204ENST00000546898 LGALS12Q96DT0 336 aa13.19□□□□□ -0.3
DDX54-204ENST00000546898 CCL13Q99616 98 aa13.19□□□□□ -0.3
DDX54-204ENST00000546898 SLC6A7Q99884 636 aa13.19□□□□□ -0.3
DDX54-204ENST00000546898 ADI1Q9BV57 179 aa13.19□□□□□ -0.3
DDX54-204ENST00000546898 C19orf24Q9BVV8 132 aa13.19□□□□□ -0.3
DDX54-204ENST00000546898 WDR13Q9H1Z4 485 aa13.19□□□□□ -0.3
DDX54-204ENST00000546898 LOC107986453A0A1B0GWG9 222 aa13.18□□□□□ -0.3
DDX54-204ENST00000546898 ANKRD61A6NGH8 418 aa13.18□□□□□ -0.3
DDX54-204ENST00000546898 RHBDL1O75783 438 aa13.18□□□□□ -0.3
DDX54-204ENST00000546898 GATBO75879 557 aaKnown RBP13.18□□□□□ -0.3
DDX54-204ENST00000546898 RAB40BQ12829 278 aa13.18□□□□□ -0.3
DDX54-204ENST00000546898 ODF4Q2M2E3 257 aa13.18□□□□□ -0.3
DDX54-204ENST00000546898 FDX2Q6P4F2 183 aa13.18□□□□□ -0.3
DDX54-204ENST00000546898 HAGHLQ6PII5 290 aaPredicted RBP13.18□□□□□ -0.3
DDX54-204ENST00000546898 PACRGLQ8N7B6 248 aa13.18□□□□□ -0.3
DDX54-204ENST00000546898 ST8SIA4Q92187 359 aa13.18□□□□□ -0.3
DDX54-204ENST00000546898 SEH1LQ96EE3 360 aa13.18□□□□□ -0.3
DDX54-204ENST00000546898 DMRTB1Q96MA1 342 aa13.18□□□□□ -0.3
DDX54-204ENST00000546898 INPP5EQ9NRR6 644 aa13.18□□□□□ -0.3
DDX54-204ENST00000546898 GPR173Q9NS66 373 aa13.18□□□□□ -0.3
DDX54-204ENST00000546898 RASL12Q9NYN1 266 aa13.18□□□□□ -0.3
DDX54-204ENST00000546898 NLKQ9UBE8 527 aa13.18□□□□□ -0.3
DDX54-204ENST00000546898 TRAV40A0A0B4J280 105 aa13.17□□□□□ -0.3
DDX54-204ENST00000546898 PQLC2LA1A4F0 135 aa13.17□□□□□ -0.3
DDX54-204ENST00000546898 ZNF879B4DU55 563 aa13.17□□□□□ -0.3
DDX54-204ENST00000546898 J3QT63 122 aa13.17□□□□□ -0.3
DDX54-204ENST00000546898 NDUFB3O43676 98 aa13.17□□□□□ -0.3
DDX54-204ENST00000546898 FCN3O75636 299 aa13.17□□□□□ -0.3
DDX54-204ENST00000546898 FADS2O95864 444 aaKnown RBP13.17□□□□□ -0.3
DDX54-204ENST00000546898 PLATP00750 562 aa13.17□□□□□ -0.3
DDX54-204ENST00000546898 IGHA1P01876 353 aa13.17□□□□□ -0.3
DDX54-204ENST00000546898 HTR1AP08908 422 aa13.17□□□□□ -0.3
DDX54-204ENST00000546898 KIR3DL2P43630 455 aa13.17□□□□□ -0.3
DDX54-204ENST00000546898 HAAOP46952 286 aa13.17□□□□□ -0.3
DDX54-204ENST00000546898 TGM4P49221 684 aa13.17□□□□□ -0.3
DDX54-204ENST00000546898 CCR9P51686 369 aa13.17□□□□□ -0.3
DDX54-204ENST00000546898 GMFBP60983 142 aa13.17□□□□□ -0.3
DDX54-204ENST00000546898 FGF12P61328 243 aa13.17□□□□□ -0.3
DDX54-204ENST00000546898 RCN1Q15293 331 aa13.17□□□□□ -0.3
DDX54-204ENST00000546898 LRRC10Q5BKY1 277 aa13.17□□□□□ -0.3
DDX54-204ENST00000546898 TMEM244Q5VVB8 128 aa13.17□□□□□ -0.3
DDX54-204ENST00000546898 LPCAT4Q643R3 524 aa13.17□□□□□ -0.3
DDX54-204ENST00000546898 ZNF788Q6ZQV5 615 aa13.17□□□□□ -0.3
DDX54-204ENST00000546898 C9orf139Q6ZV77 190 aa13.17□□□□□ -0.3
DDX54-204ENST00000546898 BTN2A1Q7KYR7 527 aa13.17□□□□□ -0.3
DDX54-204ENST00000546898 SYS1Q8N2H4 156 aa13.17□□□□□ -0.3
DDX54-204ENST00000546898 FAM216BQ8N7L0 139 aa13.17□□□□□ -0.3
DDX54-204ENST00000546898 POC1AQ8NBT0 407 aa13.17□□□□□ -0.3
DDX54-204ENST00000546898 OR2G2Q8NGZ5 317 aa13.17□□□□□ -0.3
DDX54-204ENST00000546898 ANGPTL6Q8NI99 470 aa13.17□□□□□ -0.3
DDX54-204ENST00000546898 TMIGD2Q96BF3 282 aa13.17□□□□□ -0.3
DDX54-204ENST00000546898 MED30Q96HR3 178 aa13.17□□□□□ -0.3
DDX54-204ENST00000546898 CHST5Q9GZS9 411 aa13.17□□□□□ -0.3
DDX54-204ENST00000546898 RASSF4Q9H2L5 321 aa13.17□□□□□ -0.3
DDX54-204ENST00000546898 ZNF69Q9UC07 566 aa13.17□□□□□ -0.3
DDX54-204ENST00000546898 AASSQ9UDR5 926 aa13.17□□□□□ -0.3
DDX54-204ENST00000546898 SLC7A11Q9UPY5 501 aa13.17□□□□□ -0.3
DDX54-204ENST00000546898 POLDIP2Q9Y2S7 368 aa13.17□□□□□ -0.3
DDX54-204ENST00000546898 RPL36Q9Y3U8 105 aaKnown RBP13.17□□□□□ -0.3
DDX54-204ENST00000546898 A0A1B0GW55 424 aa13.16□□□□□ -0.3
DDX54-204ENST00000546898 OR2AT4A6NND4 320 aa13.16□□□□□ -0.3
DDX54-204ENST00000546898 TRIM77I1YAP6 450 aa13.16□□□□□ -0.3
DDX54-204ENST00000546898 ISG15P05161 165 aa13.16□□□□□ -0.3
DDX54-204ENST00000546898 DUX4L2P0CJ85 424 aa13.16□□□□□ -0.3
DDX54-204ENST00000546898 DUX4L3P0CJ86 424 aa13.16□□□□□ -0.3
DDX54-204ENST00000546898 DUX4L4P0CJ87 422 aa13.16□□□□□ -0.3
DDX54-204ENST00000546898 DUX4L5P0CJ88 424 aa13.16□□□□□ -0.3
DDX54-204ENST00000546898 DUX4L6P0CJ89 424 aa13.16□□□□□ -0.3
DDX54-204ENST00000546898 DUX4L7P0CJ90 424 aa13.16□□□□□ -0.3
DDX54-204ENST00000546898 PGA5P0DJD9 388 aa13.16□□□□□ -0.3
DDX54-204ENST00000546898 IGHV4-38-2P0DP08 117 aa13.16□□□□□ -0.3
DDX54-204ENST00000546898 AMY2BP19961 511 aa13.16□□□□□ -0.3
DDX54-204ENST00000546898 MPZP25189 248 aa13.16□□□□□ -0.3
DDX54-204ENST00000546898 OR12D2P58182 307 aa13.16□□□□□ -0.3
DDX54-204ENST00000546898 BPIFB3P59826 476 aa13.16□□□□□ -0.3
DDX54-204ENST00000546898 IL13RA1P78552 427 aa13.16□□□□□ -0.3
DDX54-204ENST00000546898 MRPL28Q13084 256 aaKnown RBP13.16□□□□□ -0.3
DDX54-204ENST00000546898 GALEQ14376 348 aa13.16□□□□□ -0.3
DDX54-204ENST00000546898 SMIM21Q3B7S5 101 aa13.16□□□□□ -0.3
DDX54-204ENST00000546898 KLHL22Q53GT1 634 aa13.16□□□□□ -0.3
DDX54-204ENST00000546898 DMRTC1Q5HYR2 192 aa13.16□□□□□ -0.3
DDX54-204ENST00000546898 DUX4L9Q6RFH8 374 aaPredicted RBP13.16□□□□□ -0.3
DDX54-204ENST00000546898 RBMS3Q6XE24 437 aaKnown RBP13.16□□□□□ -0.3
DDX54-204ENST00000546898 APH1BQ8WW43 257 aa13.16□□□□□ -0.3
DDX54-204ENST00000546898 C22orf15Q8WYQ4 148 aa13.16□□□□□ -0.3
DDX54-204ENST00000546898 PP6455Q8WZ26 134 aa13.16□□□□□ -0.3
DDX54-204ENST00000546898 RNF166Q96A37 237 aaPredicted RBP13.16□□□□□ -0.3
DDX54-204ENST00000546898 GAFA1Q96PS6 74 aa13.16□□□□□ -0.3
DDX54-204ENST00000546898 ALG8Q9BVK2 526 aa13.16□□□□□ -0.3
DDX54-204ENST00000546898 MS4A7Q9GZW8 240 aaPredicted RBP13.16□□□□□ -0.3
DDX54-204ENST00000546898 SNTG1Q9NSN8 517 aa13.16□□□□□ -0.3
DDX54-204ENST00000546898 MRPS18AQ9NVS2 196 aaKnown RBP13.16□□□□□ -0.3
DDX54-204ENST00000546898 DUX4Q9UBX2 424 aa13.16□□□□□ -0.3
DDX54-204ENST00000546898 RPUSD1Q9UJJ7 312 aaKnown RBP13.16□□□□□ -0.3
DDX54-204ENST00000546898 SIGLEC5O15389 551 aa13.15□□□□□ -0.3
DDX54-204ENST00000546898 NOS1APO75052 506 aaPredicted RBP13.15□□□□□ -0.3
DDX54-204ENST00000546898 RGS9O75916 674 aaPredicted RBP13.15□□□□□ -0.3
DDX54-204ENST00000546898 SERPINA3P01011 423 aa13.15□□□□□ -0.3
DDX54-204ENST00000546898 MMP9P14780 707 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms