RNA–Protein interactions for RNA: ENST00000546534.1

SCAF11-208, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 705 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-208ENST00000546534 DNAJC27Q9NZQ0 273 aa10.21□□□□□ -0.77
SCAF11-208ENST00000546534 TBL2Q9Y4P3 447 aaKnown RBP10.21□□□□□ -0.77
SCAF11-208ENST00000546534 TENM2Q9NT68 2774 aa10.2□□□□□ -0.78
SCAF11-208ENST00000546534 hCG_1809904A0A1W2PP81 198 aa10.2□□□□□ -0.78
SCAF11-208ENST00000546534 A0A1W2PPE2 198 aa10.2□□□□□ -0.78
SCAF11-208ENST00000546534 A0A1W2PR64 198 aa10.2□□□□□ -0.78
SCAF11-208ENST00000546534 A0A1W2PRV1 198 aa10.2□□□□□ -0.78
SCAF11-208ENST00000546534 ODF3BA8MYP8 253 aa10.2□□□□□ -0.78
SCAF11-208ENST00000546534 CLIC3O95833 236 aa10.2□□□□□ -0.78
SCAF11-208ENST00000546534 ARG1P05089 322 aa10.2□□□□□ -0.78
SCAF11-208ENST00000546534 CHRM2P08172 466 aa10.2□□□□□ -0.78
SCAF11-208ENST00000546534 CCDC159P0C7I6 412 aa10.2□□□□□ -0.78
SCAF11-208ENST00000546534 NCK1P16333 377 aa10.2□□□□□ -0.78
SCAF11-208ENST00000546534 HSD11B1P28845 292 aa10.2□□□□□ -0.78
SCAF11-208ENST00000546534 FMO3P31513 532 aa10.2□□□□□ -0.78
SCAF11-208ENST00000546534 GPM6AP51674 278 aa10.2□□□□□ -0.78
SCAF11-208ENST00000546534 DYNLT3P51808 116 aa10.2□□□□□ -0.78
SCAF11-208ENST00000546534 ZNF121P58317 390 aaPredicted RBP10.2□□□□□ -0.78
SCAF11-208ENST00000546534 ZNF273Q14593 569 aa10.2□□□□□ -0.78
SCAF11-208ENST00000546534 MAPRE2Q15555 327 aa10.2□□□□□ -0.78
SCAF11-208ENST00000546534 SNCBQ16143 134 aa10.2□□□□□ -0.78
SCAF11-208ENST00000546534 TEX30Q5JUR7 227 aa10.2□□□□□ -0.78
SCAF11-208ENST00000546534 C10orf99Q6UWK7 81 aa10.2□□□□□ -0.78
SCAF11-208ENST00000546534 THAP5Q7Z6K1 395 aa10.2□□□□□ -0.78
SCAF11-208ENST00000546534 TIGD4Q8IY51 512 aa10.2□□□□□ -0.78
SCAF11-208ENST00000546534 FTMTQ8N4E7 242 aa10.2□□□□□ -0.78
SCAF11-208ENST00000546534 CD177Q8N6Q3 437 aa10.2□□□□□ -0.78
SCAF11-208ENST00000546534 OR52H1Q8NGJ2 320 aa10.2□□□□□ -0.78
SCAF11-208ENST00000546534 OR2T27Q8NH04 317 aa10.2□□□□□ -0.78
SCAF11-208ENST00000546534 PIGCQ92535 297 aa10.2□□□□□ -0.78
SCAF11-208ENST00000546534 FAM162AQ96A26 154 aa10.2□□□□□ -0.78
SCAF11-208ENST00000546534 RCN3Q96D15 328 aa10.2□□□□□ -0.78
SCAF11-208ENST00000546534 SIKE1Q9BRV8 207 aa10.2□□□□□ -0.78
SCAF11-208ENST00000546534 GPR61Q9BZJ8 451 aa10.2□□□□□ -0.78
SCAF11-208ENST00000546534 SAR1AQ9NR31 198 aa10.2□□□□□ -0.78
SCAF11-208ENST00000546534 CD300AQ9UGN4 299 aa10.2□□□□□ -0.78
SCAF11-208ENST00000546534 AP3M1Q9Y2T2 418 aa10.2□□□□□ -0.78
SCAF11-208ENST00000546534 NME4O00746 187 aa10.19□□□□□ -0.78
SCAF11-208ENST00000546534 CST4P01036 141 aa10.19□□□□□ -0.78
SCAF11-208ENST00000546534 GYPBP06028 91 aa10.19□□□□□ -0.78
SCAF11-208ENST00000546534 GSSP48637 474 aa10.19□□□□□ -0.78
SCAF11-208ENST00000546534 EIF2B1Q14232 305 aaKnown RBP10.19□□□□□ -0.78
SCAF11-208ENST00000546534 KRT72Q14CN4 511 aa10.19□□□□□ -0.78
SCAF11-208ENST00000546534 KHDC1LQ5JSQ8 128 aa10.19□□□□□ -0.78
SCAF11-208ENST00000546534 NKAPLQ5M9Q1 402 aa10.19□□□□□ -0.78
SCAF11-208ENST00000546534 ARPINQ7Z6K5 226 aa10.19□□□□□ -0.78
SCAF11-208ENST00000546534 MRPL41Q8IXM3 137 aaKnown RBP10.19□□□□□ -0.78
SCAF11-208ENST00000546534 LINC00471Q8N535 108 aa10.19□□□□□ -0.78
SCAF11-208ENST00000546534 FAM86B1Q8N7N1 296 aa10.19□□□□□ -0.78
SCAF11-208ENST00000546534 PGAM5Q96HS1 289 aa10.19□□□□□ -0.78
SCAF11-208ENST00000546534 OR10A2Q9H208 303 aa10.19□□□□□ -0.78
SCAF11-208ENST00000546534 RGCCQ9H4X1 137 aa10.19□□□□□ -0.78
SCAF11-208ENST00000546534 LIN7BQ9HAP6 207 aa10.19□□□□□ -0.78
SCAF11-208ENST00000546534 ABCB9Q9NP78 766 aa10.19□□□□□ -0.78
SCAF11-208ENST00000546534 RFPL4AA6NLU0 287 aa10.18□□□□□ -0.78
SCAF11-208ENST00000546534 RFPL4AL1F8VTS6 287 aa10.18□□□□□ -0.78
SCAF11-208ENST00000546534 MTRF1O75570 445 aaKnown RBP10.18□□□□□ -0.78
SCAF11-208ENST00000546534 GADD45GO95257 159 aa10.18□□□□□ -0.78
SCAF11-208ENST00000546534 LMO1P25800 156 aa10.18□□□□□ -0.78
SCAF11-208ENST00000546534 DLX6P56179 175 aa10.18□□□□□ -0.78
SCAF11-208ENST00000546534 OR12D2P58182 307 aa10.18□□□□□ -0.78
SCAF11-208ENST00000546534 ZNF626Q68DY1 528 aa10.18□□□□□ -0.78
SCAF11-208ENST00000546534 ETV3LQ6ZN32 361 aa10.18□□□□□ -0.78
SCAF11-208ENST00000546534 CALHM1Q8IU99 346 aa10.18□□□□□ -0.78
SCAF11-208ENST00000546534 SLC37A3Q8NCC5 494 aa10.18□□□□□ -0.78
SCAF11-208ENST00000546534 OR4X2Q8NGF9 303 aa10.18□□□□□ -0.78
SCAF11-208ENST00000546534 OR13D1Q8NGV5 346 aa10.18□□□□□ -0.78
SCAF11-208ENST00000546534 RNF133Q8WVZ7 376 aa10.18□□□□□ -0.78
SCAF11-208ENST00000546534 ATP6V1G3Q96LB4 118 aa10.18□□□□□ -0.78
SCAF11-208ENST00000546534 HIST1H2AAQ96QV6 131 aa10.18□□□□□ -0.78
SCAF11-208ENST00000546534 ABHD6Q9BV23 337 aa10.18□□□□□ -0.78
SCAF11-208ENST00000546534 C1orf21Q9H246 121 aa10.18□□□□□ -0.78
SCAF11-208ENST00000546534 OR51I2Q9H344 312 aa10.18□□□□□ -0.78
SCAF11-208ENST00000546534 EGLN3Q9H6Z9 239 aa10.18□□□□□ -0.78
SCAF11-208ENST00000546534 MRGBPQ9NV56 204 aa10.18□□□□□ -0.78
SCAF11-208ENST00000546534 GAR1Q9NY12 217 aaKnown RBP10.18□□□□□ -0.78
SCAF11-208ENST00000546534 HILPDAQ9Y5L2 63 aa10.18□□□□□ -0.78
SCAF11-208ENST00000546534 STAB2Q8WWQ8 2551 aa10.18□□□□□ -0.78
SCAF11-208ENST00000546534 C17orf98A8MV24 154 aa10.17□□□□□ -0.78
SCAF11-208ENST00000546534 FAM90A22PA8MWA6 464 aa10.17□□□□□ -0.78
SCAF11-208ENST00000546534 ZNF732B4DXR9 585 aa10.17□□□□□ -0.78
SCAF11-208ENST00000546534 SLC1A7O00341 560 aa10.17□□□□□ -0.78
SCAF11-208ENST00000546534 APOC1P02654 83 aa10.17□□□□□ -0.78
SCAF11-208ENST00000546534 PIPP12273 146 aaPredicted RBP10.17□□□□□ -0.78
SCAF11-208ENST00000546534 PRDX2P32119 198 aa10.17□□□□□ -0.78
SCAF11-208ENST00000546534 CEBPDP49716 269 aaPredicted RBP10.17□□□□□ -0.78
SCAF11-208ENST00000546534 SMIM11AP58511 58 aa10.17□□□□□ -0.78
SCAF11-208ENST00000546534 SF3A3Q12874 501 aaKnown RBP eCLIP10.17□□□□□ -0.78
SCAF11-208ENST00000546534 DYNC1I2Q13409 638 aaKnown RBP10.17□□□□□ -0.78
SCAF11-208ENST00000546534 KLHL22Q53GT1 634 aa10.17□□□□□ -0.78
SCAF11-208ENST00000546534 DMRTC1Q5HYR2 192 aa10.17□□□□□ -0.78
SCAF11-208ENST00000546534 CASC10Q5T4H9 136 aa10.17□□□□□ -0.78
SCAF11-208ENST00000546534 ACP7Q6ZNF0 438 aa10.17□□□□□ -0.78
SCAF11-208ENST00000546534 ZDHHC23Q8IYP9 409 aa10.17□□□□□ -0.78
SCAF11-208ENST00000546534 ZNF561Q8N587 486 aa10.17□□□□□ -0.78
SCAF11-208ENST00000546534 OR11H6Q8NGC7 330 aa10.17□□□□□ -0.78
SCAF11-208ENST00000546534 ZNF671Q8TAW3 534 aa10.17□□□□□ -0.78
SCAF11-208ENST00000546534 AQP3Q92482 292 aa10.17□□□□□ -0.78
SCAF11-208ENST00000546534 LYZL4Q96KX0 146 aa10.17□□□□□ -0.78
SCAF11-208ENST00000546534 AMELYQ99218 206 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms