RNA–Protein interactions for RNA: ENST00000546164.5

YBX3-217, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 805 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-217ENST00000546164 AMBNQ9NP70 447 aa9.87□□□□□ -0.83
YBX3-217ENST00000546164 MYRFQ9Y2G1 1151 aa9.87□□□□□ -0.83
YBX3-217ENST00000546164 RPL36Q9Y3U8 105 aaKnown RBP9.87□□□□□ -0.83
YBX3-217ENST00000546164 IGHV3OR15-7A0A075B7D8 119 aa9.86□□□□□ -0.83
YBX3-217ENST00000546164 LOC107986453A0A1B0GWG9 222 aa9.86□□□□□ -0.83
YBX3-217ENST00000546164 PQLC2LA1A4F0 135 aa9.86□□□□□ -0.83
YBX3-217ENST00000546164 ANKRD61A6NGH8 418 aa9.86□□□□□ -0.83
YBX3-217ENST00000546164 C22orf46C9J442 243 aa9.86□□□□□ -0.83
YBX3-217ENST00000546164 ANKRD65E5RJM6 399 aa9.86□□□□□ -0.83
YBX3-217ENST00000546164 TCF21O43680 179 aa9.86□□□□□ -0.83
YBX3-217ENST00000546164 ENSAO43768 121 aaKnown RBP9.86□□□□□ -0.83
YBX3-217ENST00000546164 LIPFP07098 398 aa9.86□□□□□ -0.83
YBX3-217ENST00000546164 ADRA2CP18825 462 aa9.86□□□□□ -0.83
YBX3-217ENST00000546164 AMY2BP19961 511 aa9.86□□□□□ -0.83
YBX3-217ENST00000546164 TGM4P49221 684 aa9.86□□□□□ -0.83
YBX3-217ENST00000546164 ADARB1P78563 741 aaKnown RBP9.86□□□□□ -0.83
YBX3-217ENST00000546164 MRPL28Q13084 256 aaKnown RBP9.86□□□□□ -0.83
YBX3-217ENST00000546164 IL18R1Q13478 541 aa9.86□□□□□ -0.83
YBX3-217ENST00000546164 KLHL22Q53GT1 634 aa9.86□□□□□ -0.83
YBX3-217ENST00000546164 TMEM244Q5VVB8 128 aa9.86□□□□□ -0.83
YBX3-217ENST00000546164 USP43Q70EL4 1123 aa9.86□□□□□ -0.83
YBX3-217ENST00000546164 SLC36A1Q7Z2H8 476 aa9.86□□□□□ -0.83
YBX3-217ENST00000546164 ZNF573Q86YE8 665 aa9.86□□□□□ -0.83
YBX3-217ENST00000546164 OR52I1Q8NGK6 324 aa9.86□□□□□ -0.83
YBX3-217ENST00000546164 ZNF671Q8TAW3 534 aa9.86□□□□□ -0.83
YBX3-217ENST00000546164 TMEM158Q8WZ71 300 aa9.86□□□□□ -0.83
YBX3-217ENST00000546164 AQP3Q92482 292 aa9.86□□□□□ -0.83
YBX3-217ENST00000546164 UPRTQ96BW1 309 aa9.86□□□□□ -0.83
YBX3-217ENST00000546164 PELI1Q96FA3 418 aa9.86□□□□□ -0.83
YBX3-217ENST00000546164 C4orf36Q96KX1 117 aa9.86□□□□□ -0.83
YBX3-217ENST00000546164 TECTBQ96PL2 329 aa9.86□□□□□ -0.83
YBX3-217ENST00000546164 NUDT16L1Q9BRJ7 211 aaKnown RBP9.86□□□□□ -0.83
YBX3-217ENST00000546164 ADI1Q9BV57 179 aa9.86□□□□□ -0.83
YBX3-217ENST00000546164 CHST5Q9GZS9 411 aa9.86□□□□□ -0.83
YBX3-217ENST00000546164 WDR13Q9H1Z4 485 aa9.86□□□□□ -0.83
YBX3-217ENST00000546164 SMURF1Q9HCE7 757 aa9.86□□□□□ -0.83
YBX3-217ENST00000546164 FGF20Q9NP95 211 aaPredicted RBP9.86□□□□□ -0.83
YBX3-217ENST00000546164 GPR173Q9NS66 373 aa9.86□□□□□ -0.83
YBX3-217ENST00000546164 ERVK13-1Q9NX77 482 aa9.86□□□□□ -0.83
YBX3-217ENST00000546164 FRRS1LQ9P0K9 344 aa9.86□□□□□ -0.83
YBX3-217ENST00000546164 HSPE1-MOB4S4R3N1 261 aa9.86□□□□□ -0.83
YBX3-217ENST00000546164 ANK2Q01484 3957 aa9.85□□□□□ -0.83
YBX3-217ENST00000546164 OR4C45A6NMZ5 311 aa9.85□□□□□ -0.83
YBX3-217ENST00000546164 J3QT63 122 aa9.85□□□□□ -0.83
YBX3-217ENST00000546164 DVL1O14640 695 aa9.85□□□□□ -0.83
YBX3-217ENST00000546164 GPR37O15354 613 aa9.85□□□□□ -0.83
YBX3-217ENST00000546164 TMPRSS2O15393 492 aa9.85□□□□□ -0.83
YBX3-217ENST00000546164 AKR7A2O43488 359 aa9.85□□□□□ -0.83
YBX3-217ENST00000546164 NOS1APO75052 506 aaPredicted RBP9.85□□□□□ -0.83
YBX3-217ENST00000546164 FCN3O75636 299 aa9.85□□□□□ -0.83
YBX3-217ENST00000546164 RHBDL1O75783 438 aa9.85□□□□□ -0.83
YBX3-217ENST00000546164 ECDO95905 644 aaPredicted RBP9.85□□□□□ -0.83
YBX3-217ENST00000546164 HTR1AP08908 422 aa9.85□□□□□ -0.83
YBX3-217ENST00000546164 ACAA1P09110 424 aaPredicted RBP9.85□□□□□ -0.83
YBX3-217ENST00000546164 MPZP25189 248 aa9.85□□□□□ -0.83
YBX3-217ENST00000546164 NANOS3P60323 173 aaKnown RBP9.85□□□□□ -0.83
YBX3-217ENST00000546164 ODF4Q2M2E3 257 aa9.85□□□□□ -0.83
YBX3-217ENST00000546164 KLF17Q5JT82 389 aaPredicted RBP9.85□□□□□ -0.83
YBX3-217ENST00000546164 HAGHLQ6PII5 290 aaPredicted RBP9.85□□□□□ -0.83
YBX3-217ENST00000546164 LHFPL3Q86UP9 236 aa9.85□□□□□ -0.83
YBX3-217ENST00000546164 DHRSXQ8N5I4 330 aa9.85□□□□□ -0.83
YBX3-217ENST00000546164 SETD9Q8NE22 299 aa9.85□□□□□ -0.83
YBX3-217ENST00000546164 ANGPTL6Q8NI99 470 aa9.85□□□□□ -0.83
YBX3-217ENST00000546164 HAVCR2Q8TDQ0 301 aa9.85□□□□□ -0.83
YBX3-217ENST00000546164 SEH1LQ96EE3 360 aa9.85□□□□□ -0.83
YBX3-217ENST00000546164 DMRTB1Q96MA1 342 aa9.85□□□□□ -0.83
YBX3-217ENST00000546164 CCL13Q99616 98 aa9.85□□□□□ -0.83
YBX3-217ENST00000546164 ALG8Q9BVK2 526 aa9.85□□□□□ -0.83
YBX3-217ENST00000546164 DCLRE1BQ9H816 532 aa9.85□□□□□ -0.83
YBX3-217ENST00000546164 PLEKHA1Q9HB21 404 aa9.85□□□□□ -0.83
YBX3-217ENST00000546164 RASL12Q9NYN1 266 aa9.85□□□□□ -0.83
YBX3-217ENST00000546164 IRGMA1A4Y4 181 aa9.84□□□□□ -0.83
YBX3-217ENST00000546164 RNF212BA8MTL3 300 aa9.84□□□□□ -0.83
YBX3-217ENST00000546164 H0YAE9 185 aa9.84□□□□□ -0.83
YBX3-217ENST00000546164 J3QLW9 94 aa9.84□□□□□ -0.83
YBX3-217ENST00000546164 GATBO75879 557 aaKnown RBP9.84□□□□□ -0.83
YBX3-217ENST00000546164 CLIC3O95833 236 aa9.84□□□□□ -0.83
YBX3-217ENST00000546164 RPSAP08865 295 aaKnown RBP9.84□□□□□ -0.83
YBX3-217ENST00000546164 PGA5P0DJD9 388 aa9.84□□□□□ -0.83
YBX3-217ENST00000546164 ZNF19P17023 458 aa9.84□□□□□ -0.83
YBX3-217ENST00000546164 GLRA1P23415 457 aa9.84□□□□□ -0.83
YBX3-217ENST00000546164 DCKP27707 260 aa9.84□□□□□ -0.83
YBX3-217ENST00000546164 HAAOP46952 286 aa9.84□□□□□ -0.83
YBX3-217ENST00000546164 ELF3P78545 371 aaPredicted RBP9.84□□□□□ -0.83
YBX3-217ENST00000546164 ALKBH1Q13686 389 aaKnown RBP9.84□□□□□ -0.83
YBX3-217ENST00000546164 UBE2V2Q15819 145 aa9.84□□□□□ -0.83
YBX3-217ENST00000546164 SMN1Q16637 294 aaKnown RBP9.84□□□□□ -0.83
YBX3-217ENST00000546164 KRTAP24-1Q3LI83 254 aa9.84□□□□□ -0.83
YBX3-217ENST00000546164 ARMCX4Q5H9R4 360 aa9.84□□□□□ -0.83
YBX3-217ENST00000546164 DMRTC1Q5HYR2 192 aa9.84□□□□□ -0.83
YBX3-217ENST00000546164 ZNF788Q6ZQV5 615 aa9.84□□□□□ -0.83
YBX3-217ENST00000546164 UTS2BQ765I0 119 aa9.84□□□□□ -0.83
YBX3-217ENST00000546164 RDH10Q8IZV5 341 aa9.84□□□□□ -0.83
YBX3-217ENST00000546164 POC1AQ8NBT0 407 aa9.84□□□□□ -0.83
YBX3-217ENST00000546164 SPATA3Q8NHX4 192 aa9.84□□□□□ -0.83
YBX3-217ENST00000546164 ZNF418Q8TF45 676 aaPredicted RBP9.84□□□□□ -0.83
YBX3-217ENST00000546164 CYGBQ8WWM9 190 aa9.84□□□□□ -0.83
YBX3-217ENST00000546164 PP6455Q8WZ26 134 aa9.84□□□□□ -0.83
YBX3-217ENST00000546164 PKIBQ9C010 78 aa9.84□□□□□ -0.83
YBX3-217ENST00000546164 NLKQ9UBE8 527 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms