RNA–Protein interactions for RNA: ENST00000545889.5

CLIP1-218, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 4,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-218ENST00000545889 KCNMB2Q9Y691 235 aa7.68□□□□□ -1.18
CLIP1-218ENST00000545889 NAP1L6A6NFF2 107 aa7.68□□□□□ -1.18
CLIP1-218ENST00000545889 ACTL6AO96019 429 aa7.68□□□□□ -1.18
CLIP1-218ENST00000545889 SNRNP70P08621 437 aaKnown RBP7.68□□□□□ -1.18
CLIP1-218ENST00000545889 PPP3CBP16298 524 aa7.68□□□□□ -1.18
CLIP1-218ENST00000545889 MAGEA5P43359 124 aa7.68□□□□□ -1.18
CLIP1-218ENST00000545889 CSN1S1P47710 185 aa7.68□□□□□ -1.18
CLIP1-218ENST00000545889 RAB5CP51148 216 aa7.68□□□□□ -1.18
CLIP1-218ENST00000545889 SRPXP78539 464 aa7.68□□□□□ -1.18
CLIP1-218ENST00000545889 KLRB1Q12918 225 aa7.68□□□□□ -1.18
CLIP1-218ENST00000545889 NCMAPQ5T1S8 102 aa7.68□□□□□ -1.18
CLIP1-218ENST00000545889 LIPNQ5VXI9 398 aa7.68□□□□□ -1.18
CLIP1-218ENST00000545889 ZNF574Q6ZN55 896 aaPredicted RBP7.68□□□□□ -1.18
CLIP1-218ENST00000545889 MSRB3Q8IXL7 192 aa7.68□□□□□ -1.18
CLIP1-218ENST00000545889 M1APQ8TC57 530 aa7.68□□□□□ -1.18
CLIP1-218ENST00000545889 SLAMF9Q96A28 289 aa7.68□□□□□ -1.18
CLIP1-218ENST00000545889 RBMXL1Q96E39 390 aaKnown RBP7.68□□□□□ -1.18
CLIP1-218ENST00000545889 REEP6Q96HR9 211 aa7.68□□□□□ -1.18
CLIP1-218ENST00000545889 MARVELD1Q9BSK0 173 aa7.68□□□□□ -1.18
CLIP1-218ENST00000545889 MOB1AQ9H8S9 216 aa7.68□□□□□ -1.18
CLIP1-218ENST00000545889 COA4Q9NYJ1 87 aa7.68□□□□□ -1.18
CLIP1-218ENST00000545889 GPR55Q9Y2T6 319 aaPredicted RBP7.68□□□□□ -1.18
CLIP1-218ENST00000545889 LNP1A1A4G5 178 aa7.68□□□□□ -1.18
CLIP1-218ENST00000545889 F6UZH7 168 aa7.68□□□□□ -1.18
CLIP1-218ENST00000545889 AQP7O14520 342 aa7.68□□□□□ -1.18
CLIP1-218ENST00000545889 PRSS23O95084 383 aa7.68□□□□□ -1.18
CLIP1-218ENST00000545889 TSPAN15O95858 294 aa7.68□□□□□ -1.18
CLIP1-218ENST00000545889 C1QCP02747 245 aa7.68□□□□□ -1.18
CLIP1-218ENST00000545889 HBG1P69891 147 aa7.68□□□□□ -1.18
CLIP1-218ENST00000545889 HBG2P69892 147 aa7.68□□□□□ -1.18
CLIP1-218ENST00000545889 PCK2Q16822 640 aa7.68□□□□□ -1.18
CLIP1-218ENST00000545889 OR2T2Q6IF00 324 aa7.68□□□□□ -1.18
CLIP1-218ENST00000545889 MOB3AQ96BX8 217 aa7.68□□□□□ -1.18
CLIP1-218ENST00000545889 OR5H14A6NHG9 310 aa7.67□□□□□ -1.18
CLIP1-218ENST00000545889 OR5H1A6NKK0 313 aa7.67□□□□□ -1.18
CLIP1-218ENST00000545889 F12P00748 615 aaPredicted RBP7.67□□□□□ -1.18
CLIP1-218ENST00000545889 HLA-HP01893 362 aa7.67□□□□□ -1.18
CLIP1-218ENST00000545889 GP1BAP07359 652 aa7.67□□□□□ -1.18
CLIP1-218ENST00000545889 ACHEP22303 614 aa7.67□□□□□ -1.18
CLIP1-218ENST00000545889 OMGP23515 440 aa7.67□□□□□ -1.18
CLIP1-218ENST00000545889 GPR6P46095 362 aaPredicted RBP7.67□□□□□ -1.18
CLIP1-218ENST00000545889 NDUFA6P56556 154 aa7.67□□□□□ -1.18
CLIP1-218ENST00000545889 ERHP84090 104 aaKnown RBP7.67□□□□□ -1.18
CLIP1-218ENST00000545889 ELFN2Q5R3F8 820 aa7.67□□□□□ -1.18
CLIP1-218ENST00000545889 CHCHD2P9Q5T1J5 151 aaPredicted RBP7.67□□□□□ -1.18
CLIP1-218ENST00000545889 CST9LP1Q5W188 147 aa7.67□□□□□ -1.18
CLIP1-218ENST00000545889 RBM45Q8IUH3 476 aaKnown RBP7.67□□□□□ -1.18
CLIP1-218ENST00000545889 D2HGDHQ8N465 521 aa7.67□□□□□ -1.18
CLIP1-218ENST00000545889 PLPP7Q8NBV4 271 aa7.67□□□□□ -1.18
CLIP1-218ENST00000545889 SLC30A7Q8NEW0 376 aa7.67□□□□□ -1.18
CLIP1-218ENST00000545889 TOLLIPQ9H0E2 274 aa7.67□□□□□ -1.18
CLIP1-218ENST00000545889 BANF2Q9H503 90 aa7.67□□□□□ -1.18
CLIP1-218ENST00000545889 SLC39A9Q9NUM3 307 aa7.67□□□□□ -1.18
CLIP1-218ENST00000545889 MYLKQ15746 1914 aa7.67□□□□□ -1.18
CLIP1-218ENST00000545889 A0A087X0M5 115 aa7.67□□□□□ -1.18
CLIP1-218ENST00000545889 A0A1B0GTH9 108 aa7.67□□□□□ -1.18
CLIP1-218ENST00000545889 LOC107986453A0A1B0GWG9 222 aa7.67□□□□□ -1.18
CLIP1-218ENST00000545889 A0A1B0GX30 115 aa7.67□□□□□ -1.18
CLIP1-218ENST00000545889 F2RL2O00254 374 aa7.67□□□□□ -1.18
CLIP1-218ENST00000545889 GPR37O15354 613 aa7.67□□□□□ -1.18
CLIP1-218ENST00000545889 SELENOFO60613 162 aa7.67□□□□□ -1.18
CLIP1-218ENST00000545889 CHRM2P08172 466 aa7.67□□□□□ -1.18
CLIP1-218ENST00000545889 EMC4Q5J8M3 183 aa7.67□□□□□ -1.18
CLIP1-218ENST00000545889 Q6ZRG5 221 aa7.67□□□□□ -1.18
CLIP1-218ENST00000545889 TMUB2Q71RG4 321 aa7.67□□□□□ -1.18
CLIP1-218ENST00000545889 OR2AE1Q8NHA4 323 aa7.67□□□□□ -1.18
CLIP1-218ENST00000545889 SLC25A46Q96AG3 418 aa7.67□□□□□ -1.18
CLIP1-218ENST00000545889 RASL10BQ96S79 203 aa7.67□□□□□ -1.18
CLIP1-218ENST00000545889 SAP30LQ9HAJ7 183 aa7.67□□□□□ -1.18
CLIP1-218ENST00000545889 HINT3Q9NQE9 182 aaKnown RBP7.67□□□□□ -1.18
CLIP1-218ENST00000545889 KCNG2Q9UJ96 466 aa7.67□□□□□ -1.18
CLIP1-218ENST00000545889 KCNE3Q9Y6H6 103 aa7.67□□□□□ -1.18
CLIP1-218ENST00000545889 PIEZO1Q92508 2521 aa7.67□□□□□ -1.18
CLIP1-218ENST00000545889 A0A1B0GUH1 482 aa7.67□□□□□ -1.18
CLIP1-218ENST00000545889 RPS10-NUDT3A0A1W2PQS6 291 aa7.67□□□□□ -1.18
CLIP1-218ENST00000545889 PRSS37A4D1T9 235 aa7.67□□□□□ -1.18
CLIP1-218ENST00000545889 DNASE2O00115 360 aaPredicted RBP7.67□□□□□ -1.18
CLIP1-218ENST00000545889 HMGN4O00479 90 aa7.67□□□□□ -1.18
CLIP1-218ENST00000545889 GNG10P50151 68 aa7.67□□□□□ -1.18
CLIP1-218ENST00000545889 SNRPGP62308 76 aaKnown RBP7.67□□□□□ -1.18
CLIP1-218ENST00000545889 BTG1P62324 171 aa7.67□□□□□ -1.18
CLIP1-218ENST00000545889 ACSM1Q08AH1 577 aa7.67□□□□□ -1.18
CLIP1-218ENST00000545889 FAHD2BQ6P2I3 314 aaPredicted RBP7.67□□□□□ -1.18
CLIP1-218ENST00000545889 OGFOD3Q6PK18 319 aa7.67□□□□□ -1.18
CLIP1-218ENST00000545889 IL34Q6ZMJ4 242 aa7.67□□□□□ -1.18
CLIP1-218ENST00000545889 BHLHA15Q7RTS1 189 aaPredicted RBP7.67□□□□□ -1.18
CLIP1-218ENST00000545889 OVCH2Q7RTZ1 564 aa7.67□□□□□ -1.18
CLIP1-218ENST00000545889 CDC20BQ86Y33 519 aa7.67□□□□□ -1.18
CLIP1-218ENST00000545889 FAHD2AQ96GK7 314 aa7.67□□□□□ -1.18
CLIP1-218ENST00000545889 MS4A3Q96HJ5 214 aa7.67□□□□□ -1.18
CLIP1-218ENST00000545889 SMIM3Q9BZL3 60 aa7.67□□□□□ -1.18
CLIP1-218ENST00000545889 SLC38A1Q9H2H9 487 aa7.67□□□□□ -1.18
CLIP1-218ENST00000545889 ZMAT3Q9HA38 289 aaKnown RBP7.67□□□□□ -1.18
CLIP1-218ENST00000545889 PPP1R3CQ9UQK1 317 aa7.67□□□□□ -1.18
CLIP1-218ENST00000545889 PQLC2LA1A4F0 135 aa7.67□□□□□ -1.18
CLIP1-218ENST00000545889 LRP5LA4QPB2 252 aa7.67□□□□□ -1.18
CLIP1-218ENST00000545889 C19orf67A6NJJ6 358 aa7.67□□□□□ -1.18
CLIP1-218ENST00000545889 PCNX2A6NKB5 2137 aa7.67□□□□□ -1.18
CLIP1-218ENST00000545889 C3orf80F5H4A9 247 aa7.67□□□□□ -1.18
CLIP1-218ENST00000545889 PHF1O43189 567 aaPredicted RBP7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms