RNA–Protein interactions for RNA: ENST00000544584.1

CLSTN3-215, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-215ENST00000544584 TGM4P49221 684 aa4.68□□□□□ -1.66
CLSTN3-215ENST00000544584 CCR9P51686 369 aa4.68□□□□□ -1.66
CLSTN3-215ENST00000544584 BMXP51813 675 aa4.68□□□□□ -1.66
CLSTN3-215ENST00000544584 FUT6P51993 359 aa4.68□□□□□ -1.66
CLSTN3-215ENST00000544584 CAPZA1P52907 286 aa4.68□□□□□ -1.66
CLSTN3-215ENST00000544584 GBX2P52951 348 aaPredicted RBP4.68□□□□□ -1.66
CLSTN3-215ENST00000544584 ATP1B3P54709 279 aa4.68□□□□□ -1.66
CLSTN3-215ENST00000544584 CAV3P56539 151 aa4.68□□□□□ -1.66
CLSTN3-215ENST00000544584 PRSS12P56730 875 aa4.68□□□□□ -1.66
CLSTN3-215ENST00000544584 RPL15P61313 204 aaKnown RBP4.68□□□□□ -1.66
CLSTN3-215ENST00000544584 EFNB1P98172 346 aa4.68□□□□□ -1.66
CLSTN3-215ENST00000544584 FOXL1Q12952 345 aa4.68□□□□□ -1.66
CLSTN3-215ENST00000544584 BAMBIQ13145 260 aa4.68□□□□□ -1.66
CLSTN3-215ENST00000544584 MPPED2Q15777 294 aa4.68□□□□□ -1.66
CLSTN3-215ENST00000544584 LPCAT4Q643R3 524 aa4.68□□□□□ -1.66
CLSTN3-215ENST00000544584 C1orf122Q6ZSJ8 110 aa4.68□□□□□ -1.66
CLSTN3-215ENST00000544584 KRT74Q7RTS7 529 aa4.68□□□□□ -1.66
CLSTN3-215ENST00000544584 PRSS45Q7RTY3 260 aa4.68□□□□□ -1.66
CLSTN3-215ENST00000544584 MKXQ8IYA7 352 aa4.68□□□□□ -1.66
CLSTN3-215ENST00000544584 PQLC1Q8N2U9 271 aa4.68□□□□□ -1.66
CLSTN3-215ENST00000544584 CBR4Q8N4T8 237 aa4.68□□□□□ -1.66
CLSTN3-215ENST00000544584 ZNF561Q8N587 486 aa4.68□□□□□ -1.66
CLSTN3-215ENST00000544584 TMEM86BQ8N661 226 aa4.68□□□□□ -1.66
CLSTN3-215ENST00000544584 KIR3DL3Q8N743 410 aa4.68□□□□□ -1.66
CLSTN3-215ENST00000544584 PACRGLQ8N7B6 248 aa4.68□□□□□ -1.66
CLSTN3-215ENST00000544584 C3orf56Q8N813 242 aa4.68□□□□□ -1.66
CLSTN3-215ENST00000544584 SCCPDHQ8NBX0 429 aa4.68□□□□□ -1.66
CLSTN3-215ENST00000544584 OR5D14Q8NGL3 314 aa4.68□□□□□ -1.66
CLSTN3-215ENST00000544584 OR5D13Q8NGL4 314 aa4.68□□□□□ -1.66
CLSTN3-215ENST00000544584 SGMS2Q8NHU3 365 aa4.68□□□□□ -1.66
CLSTN3-215ENST00000544584 THRSPQ92748 146 aa4.68□□□□□ -1.66
CLSTN3-215ENST00000544584 BORCS8Q96FH0 119 aa4.68□□□□□ -1.66
CLSTN3-215ENST00000544584 TMPRSS13Q9BYE2 586 aa4.68□□□□□ -1.66
CLSTN3-215ENST00000544584 PKIBQ9C010 78 aa4.68□□□□□ -1.66
CLSTN3-215ENST00000544584 FAM234AQ9H0X4 552 aa4.68□□□□□ -1.66
CLSTN3-215ENST00000544584 DPAGT1Q9H3H5 408 aa4.68□□□□□ -1.66
CLSTN3-215ENST00000544584 ADGRL4Q9HBW9 690 aa4.68□□□□□ -1.66
CLSTN3-215ENST00000544584 S100A14Q9HCY8 104 aa4.68□□□□□ -1.66
CLSTN3-215ENST00000544584 SMPD3Q9NY59 655 aaPredicted RBP4.68□□□□□ -1.66
CLSTN3-215ENST00000544584 NLKQ9UBE8 527 aa4.68□□□□□ -1.66
CLSTN3-215ENST00000544584 SLC25A10Q9UBX3 287 aaPredicted RBP4.68□□□□□ -1.66
CLSTN3-215ENST00000544584 SLC22A13Q9Y226 551 aa4.68□□□□□ -1.66
CLSTN3-215ENST00000544584 TRRAPQ9Y4A5 3859 aa4.68□□□□□ -1.66
CLSTN3-215ENST00000544584 LOC100130705A0A1B0GUX0 176 aa4.67□□□□□ -1.66
CLSTN3-215ENST00000544584 TMEM212A6NML5 194 aa4.67□□□□□ -1.66
CLSTN3-215ENST00000544584 OR2AT4A6NND4 320 aa4.67□□□□□ -1.66
CLSTN3-215ENST00000544584 TRAPPC2LH3BP13 241 aa4.67□□□□□ -1.66
CLSTN3-215ENST00000544584 CLDN34H7C241 214 aa4.67□□□□□ -1.66
CLSTN3-215ENST00000544584 M0R1W7 72 aa4.67□□□□□ -1.66
CLSTN3-215ENST00000544584 PSMD9O00233 223 aa4.67□□□□□ -1.66
CLSTN3-215ENST00000544584 DVL1O14640 695 aa4.67□□□□□ -1.66
CLSTN3-215ENST00000544584 SLC16A6O15403 523 aa4.67□□□□□ -1.66
CLSTN3-215ENST00000544584 ZNF205O95201 554 aa4.67□□□□□ -1.66
CLSTN3-215ENST00000544584 ACAA1P09110 424 aaPredicted RBP4.67□□□□□ -1.66
CLSTN3-215ENST00000544584 FAHP16930 419 aa4.67□□□□□ -1.66
CLSTN3-215ENST00000544584 NDUFB7P17568 137 aa4.67□□□□□ -1.66
CLSTN3-215ENST00000544584 PRTN3P24158 256 aa4.67□□□□□ -1.66
CLSTN3-215ENST00000544584 PMELP40967 661 aa4.67□□□□□ -1.66
CLSTN3-215ENST00000544584 GABRA2P47869 451 aa4.67□□□□□ -1.66
CLSTN3-215ENST00000544584 RBP2P50120 134 aa4.67□□□□□ -1.66
CLSTN3-215ENST00000544584 ARHGDIBP52566 201 aa4.67□□□□□ -1.66
CLSTN3-215ENST00000544584 HCCSP53701 268 aa4.67□□□□□ -1.66
CLSTN3-215ENST00000544584 LGALS4P56470 323 aa4.67□□□□□ -1.66
CLSTN3-215ENST00000544584 FGF12P61328 243 aa4.67□□□□□ -1.66
CLSTN3-215ENST00000544584 CSNK2BP67870 215 aa4.67□□□□□ -1.66
CLSTN3-215ENST00000544584 IL24Q13007 206 aa4.67□□□□□ -1.66
CLSTN3-215ENST00000544584 IKZF1Q13422 519 aa4.67□□□□□ -1.66
CLSTN3-215ENST00000544584 IL18R1Q13478 541 aa4.67□□□□□ -1.66
CLSTN3-215ENST00000544584 GALEQ14376 348 aa4.67□□□□□ -1.66
CLSTN3-215ENST00000544584 CDONQ4KMG0 1287 aa4.67□□□□□ -1.66
CLSTN3-215ENST00000544584 CCDC58Q4VC31 144 aa4.67□□□□□ -1.66
CLSTN3-215ENST00000544584 TMEM255AQ5JRV8 349 aa4.67□□□□□ -1.66
CLSTN3-215ENST00000544584 CEP78Q5JTW2 689 aa4.67□□□□□ -1.66
CLSTN3-215ENST00000544584 HAGHLQ6PII5 290 aaPredicted RBP4.67□□□□□ -1.66
CLSTN3-215ENST00000544584 WDR82Q6UXN9 313 aa4.67□□□□□ -1.66
CLSTN3-215ENST00000544584 LHFPL2Q6ZUX7 228 aa4.67□□□□□ -1.66
CLSTN3-215ENST00000544584 C9orf139Q6ZV77 190 aa4.67□□□□□ -1.66
CLSTN3-215ENST00000544584 BTN2A1Q7KYR7 527 aa4.67□□□□□ -1.66
CLSTN3-215ENST00000544584 CATSPERDQ86XM0 798 aa4.67□□□□□ -1.66
CLSTN3-215ENST00000544584 CALHM1Q8IU99 346 aa4.67□□□□□ -1.66
CLSTN3-215ENST00000544584 SYS1Q8N2H4 156 aa4.67□□□□□ -1.66
CLSTN3-215ENST00000544584 GCSAMQ8N6F7 178 aa4.67□□□□□ -1.66
CLSTN3-215ENST00000544584 ZNF676Q8N7Q3 588 aa4.67□□□□□ -1.66
CLSTN3-215ENST00000544584 DNAAF1Q8NEP3 725 aa4.67□□□□□ -1.66
CLSTN3-215ENST00000544584 SSMEM1Q8WWF3 244 aa4.67□□□□□ -1.66
CLSTN3-215ENST00000544584 H1FXQ92522 213 aaKnown RBP4.67□□□□□ -1.66
CLSTN3-215ENST00000544584 SPSB1Q96BD6 273 aa4.67□□□□□ -1.66
CLSTN3-215ENST00000544584 UPRTQ96BW1 309 aa4.67□□□□□ -1.66
CLSTN3-215ENST00000544584 RNFT2Q96EX2 444 aa4.67□□□□□ -1.66
CLSTN3-215ENST00000544584 WDFY2Q96P53 400 aa4.67□□□□□ -1.66
CLSTN3-215ENST00000544584 AMELYQ99218 206 aa4.67□□□□□ -1.66
CLSTN3-215ENST00000544584 S100A13Q99584 98 aa4.67□□□□□ -1.66
CLSTN3-215ENST00000544584 TBX5Q99593 518 aa4.67□□□□□ -1.66
CLSTN3-215ENST00000544584 PCGF1Q9BSM1 259 aa4.67□□□□□ -1.66
CLSTN3-215ENST00000544584 OR51I2Q9H344 312 aa4.67□□□□□ -1.66
CLSTN3-215ENST00000544584 METTL8Q9H825 291 aaKnown RBP4.67□□□□□ -1.66
CLSTN3-215ENST00000544584 HEXA-AS1Q9H8Q6 139 aa4.67□□□□□ -1.66
CLSTN3-215ENST00000544584 RAB18Q9NP72 206 aa4.67□□□□□ -1.66
CLSTN3-215ENST00000544584 PAK1IP1Q9NWT1 392 aaPredicted RBP4.67□□□□□ -1.66
CLSTN3-215ENST00000544584 ONECUT1Q9UBC0 465 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms