RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 ASCL4Q6XD76 172 aa26.02■■□□□ 1.76
CCM2-219ENST00000544363 TMEM104Q8NE00 496 aa26.02■■□□□ 1.76
CCM2-219ENST00000544363 OR5B21A6NL26 309 aa26.01■■□□□ 1.75
CCM2-219ENST00000544363 TIMM8AO60220 97 aaPredicted RBP26.01■■□□□ 1.75
CCM2-219ENST00000544363 CDC14BO60729 498 aa26.01■■□□□ 1.75
CCM2-219ENST00000544363 PLATP00750 562 aa26.01■■□□□ 1.75
CCM2-219ENST00000544363 HLA-DQB1P01920 261 aa26.01■■□□□ 1.75
CCM2-219ENST00000544363 ZNF250P15622 560 aa26.01■■□□□ 1.75
CCM2-219ENST00000544363 GRNP28799 593 aaKnown RBP26.01■■□□□ 1.75
CCM2-219ENST00000544363 TAS2R20P59543 309 aa26.01■■□□□ 1.75
CCM2-219ENST00000544363 BSPH1Q075Z2 132 aa26.01■■□□□ 1.75
CCM2-219ENST00000544363 PIAS4Q8N2W9 510 aaPredicted RBP26.01■■□□□ 1.75
CCM2-219ENST00000544363 GAL3ST1Q99999 423 aa26.01■■□□□ 1.75
CCM2-219ENST00000544363 METTL9Q9H1A3 318 aa26.01■■□□□ 1.75
CCM2-219ENST00000544363 ELL3Q9HB65 397 aaPredicted RBP26.01■■□□□ 1.75
CCM2-219ENST00000544363 NOP16Q9Y3C1 178 aaKnown RBP26.01■■□□□ 1.75
CCM2-219ENST00000544363 A0A0A6YYH2 397 aa26■■□□□ 1.75
CCM2-219ENST00000544363 A6NJ64 397 aa26■■□□□ 1.75
CCM2-219ENST00000544363 CTDSPLO15194 276 aa26■■□□□ 1.75
CCM2-219ENST00000544363 CRTAPO75718 401 aaPredicted RBP26■■□□□ 1.75
CCM2-219ENST00000544363 MPIG6BO95866 241 aa26■■□□□ 1.75
CCM2-219ENST00000544363 MSMPQ1L6U9 139 aa26■■□□□ 1.75
CCM2-219ENST00000544363 CDH24Q86UP0 819 aa26■■□□□ 1.75
CCM2-219ENST00000544363 CALHM1Q8IU99 346 aa26■■□□□ 1.75
CCM2-219ENST00000544363 NUP37Q8NFH4 326 aa26■■□□□ 1.75
CCM2-219ENST00000544363 PXT1Q8NFP0 134 aa26■■□□□ 1.75
CCM2-219ENST00000544363 OR8S1Q8NH09 359 aa26■■□□□ 1.75
CCM2-219ENST00000544363 C15orf40Q8WUR7 153 aa26■■□□□ 1.75
CCM2-219ENST00000544363 TMEM171Q8WVE6 324 aa26■■□□□ 1.75
CCM2-219ENST00000544363 TMEM59Q9BXS4 323 aa26■■□□□ 1.75
CCM2-219ENST00000544363 TMEM100Q9NV29 134 aa26■■□□□ 1.75
CCM2-219ENST00000544363 CADP27708 2225 aa26■■□□□ 1.75
CCM2-219ENST00000544363 DIDO1Q9BTC0 2240 aaKnown RBP26■■□□□ 1.75
CCM2-219ENST00000544363 A0A1W2PP11 408 aa25.99■■□□□ 1.75
CCM2-219ENST00000544363 ISPDA4D126 451 aa25.99■■□□□ 1.75
CCM2-219ENST00000544363 B8ZZF3 427 aa25.99■■□□□ 1.75
CCM2-219ENST00000544363 ABCD4O14678 606 aa25.99■■□□□ 1.75
CCM2-219ENST00000544363 ANGPTL7O43827 346 aa25.99■■□□□ 1.75
CCM2-219ENST00000544363 GNG3P63215 75 aa25.99■■□□□ 1.75
CCM2-219ENST00000544363 OR10K1Q8NGX5 313 aa25.99■■□□□ 1.75
CCM2-219ENST00000544363 MICU1Q9BPX6 476 aa25.99■■□□□ 1.75
CCM2-219ENST00000544363 BANF2Q9H503 90 aa25.99■■□□□ 1.75
CCM2-219ENST00000544363 SERPINA2P20848 420 aa25.99■■□□□ 1.75
CCM2-219ENST00000544363 HAAOP46952 286 aa25.99■■□□□ 1.75
CCM2-219ENST00000544363 RSU1Q15404 277 aa25.99■■□□□ 1.75
CCM2-219ENST00000544363 ZSCAN4Q8NAM6 433 aaPredicted RBP25.99■■□□□ 1.75
CCM2-219ENST00000544363 ADAT1Q9BUB4 502 aaKnown RBP25.99■■□□□ 1.75
CCM2-219ENST00000544363 RTL8AQ9BWD3 113 aa25.99■■□□□ 1.75
CCM2-219ENST00000544363 SLC22A4Q9H015 551 aa25.99■■□□□ 1.75
CCM2-219ENST00000544363 LPAR5Q9H1C0 372 aa25.99■■□□□ 1.75
CCM2-219ENST00000544363 TFF3Q07654 80 aa25.98■■□□□ 1.75
CCM2-219ENST00000544363 SNTB1Q13884 538 aaKnown RBP25.98■■□□□ 1.75
CCM2-219ENST00000544363 GPR176Q14439 515 aa25.98■■□□□ 1.75
CCM2-219ENST00000544363 FAM189A2Q15884 450 aa25.98■■□□□ 1.75
CCM2-219ENST00000544363 RAB12Q6IQ22 244 aa25.98■■□□□ 1.75
CCM2-219ENST00000544363 VHLLQ6RSH7 139 aa25.98■■□□□ 1.75
CCM2-219ENST00000544363 ZNF611Q8N823 705 aa25.98■■□□□ 1.75
CCM2-219ENST00000544363 LINC01560Q8TB33 94 aa25.98■■□□□ 1.75
CCM2-219ENST00000544363 TRAV18A0A075B6X5 111 aa25.97■■□□□ 1.75
CCM2-219ENST00000544363 IGKV1-12A0A0C4DH73 117 aa25.97■■□□□ 1.75
CCM2-219ENST00000544363 A0A1W2PQ09 198 aa25.97■■□□□ 1.75
CCM2-219ENST00000544363 ZNF780AO75290 641 aaPredicted RBP25.97■■□□□ 1.75
CCM2-219ENST00000544363 SCGNO76038 276 aa25.97■■□□□ 1.75
CCM2-219ENST00000544363 IGKV1D-12P01611 117 aa25.97■■□□□ 1.75
CCM2-219ENST00000544363 IGHV3-13P01766 116 aa25.97■■□□□ 1.75
CCM2-219ENST00000544363 MGMTP16455 207 aa25.97■■□□□ 1.75
CCM2-219ENST00000544363 AGAP20933 346 aa25.97■■□□□ 1.75
CCM2-219ENST00000544363 TRIQKQ629K1 86 aa25.97■■□□□ 1.75
CCM2-219ENST00000544363 ACBD4Q8NC06 268 aa25.97■■□□□ 1.75
CCM2-219ENST00000544363 OR51F2Q8NH61 342 aa25.97■■□□□ 1.75
CCM2-219ENST00000544363 URM1Q9BTM9 101 aaKnown RBP25.97■■□□□ 1.75
CCM2-219ENST00000544363 ESRP2Q9H6T0 727 aaKnown RBP25.97■■□□□ 1.75
CCM2-219ENST00000544363 IL36GQ9NZH8 169 aa25.97■■□□□ 1.75
CCM2-219ENST00000544363 RAB27BO00194 218 aa25.96■■□□□ 1.75
CCM2-219ENST00000544363 PRB1P04280 392 aa25.96■■□□□ 1.75
CCM2-219ENST00000544363 RPS27AP62979 156 aaKnown RBP25.96■■□□□ 1.75
CCM2-219ENST00000544363 SCN1BQ07699 218 aa25.96■■□□□ 1.75
CCM2-219ENST00000544363 OR8G1Q15617 311 aa25.96■■□□□ 1.75
CCM2-219ENST00000544363 MOGAT2Q3SYC2 334 aa25.96■■□□□ 1.75
CCM2-219ENST00000544363 SLC22A25Q6T423 547 aa25.96■■□□□ 1.75
CCM2-219ENST00000544363 SLC25A26Q70HW3 274 aa25.96■■□□□ 1.75
CCM2-219ENST00000544363 LRP11Q86VZ4 500 aa25.96■■□□□ 1.75
CCM2-219ENST00000544363 ZNF573Q86YE8 665 aa25.96■■□□□ 1.75
CCM2-219ENST00000544363 THAP7Q9BT49 309 aaPredicted RBP25.96■■□□□ 1.75
CCM2-219ENST00000544363 DUSP13Q9UII6 198 aa25.96■■□□□ 1.75
CCM2-219ENST00000544363 GSTZ1O43708 216 aaPredicted RBP25.96■■□□□ 1.75
CCM2-219ENST00000544363 ZG16O60844 167 aa25.96■■□□□ 1.75
CCM2-219ENST00000544363 CSTBP04080 98 aaKnown RBP25.96■■□□□ 1.75
CCM2-219ENST00000544363 KLF3P57682 345 aaPredicted RBP25.96■■□□□ 1.75
CCM2-219ENST00000544363 MRPS10P82664 201 aaKnown RBP25.96■■□□□ 1.75
CCM2-219ENST00000544363 DGCR2P98153 550 aa25.96■■□□□ 1.75
CCM2-219ENST00000544363 RGS21Q2M5E4 152 aa25.96■■□□□ 1.75
CCM2-219ENST00000544363 NCMAPQ5T1S8 102 aa25.96■■□□□ 1.75
CCM2-219ENST00000544363 SAXO1Q8IYX7 474 aa25.96■■□□□ 1.75
CCM2-219ENST00000544363 ZNF808Q8N4W9 903 aaPredicted RBP25.96■■□□□ 1.75
CCM2-219ENST00000544363 HIVEP3Q5T1R4 2406 aa25.95■■□□□ 1.75
CCM2-219ENST00000544363 SMG1Q96Q15 3661 aaKnown RBP25.95■■□□□ 1.74
CCM2-219ENST00000544363 IGLV3-9A0A075B6K5 115 aa25.95■■□□□ 1.74
CCM2-219ENST00000544363 HTR3BO95264 441 aa25.95■■□□□ 1.74
CCM2-219ENST00000544363 CHRM2P08172 466 aa25.95■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms