RNA–Protein interactions for RNA: ENST00000544223.6

HCFC2-202, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 2,538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-202ENST00000544223 OR2J1Q9GZK6 312 aa11.78□□□□□ -0.52
HCFC2-202ENST00000544223 MSRB2Q9Y3D2 182 aa11.78□□□□□ -0.52
HCFC2-202ENST00000544223 HMX3A6NHT5 357 aa11.78□□□□□ -0.52
HCFC2-202ENST00000544223 PMP2P02689 132 aa11.78□□□□□ -0.52
HCFC2-202ENST00000544223 RLN1P04808 185 aa11.78□□□□□ -0.52
HCFC2-202ENST00000544223 NAT2P11245 290 aa11.78□□□□□ -0.52
HCFC2-202ENST00000544223 ZNF14P17017 642 aaPredicted RBP11.78□□□□□ -0.52
HCFC2-202ENST00000544223 RAB6AP20340 208 aa11.78□□□□□ -0.52
HCFC2-202ENST00000544223 RBP2P50120 134 aa11.78□□□□□ -0.52
HCFC2-202ENST00000544223 PRDX4Q13162 271 aa11.78□□□□□ -0.52
HCFC2-202ENST00000544223 C22orf34Q6ZV56 151 aa11.78□□□□□ -0.52
HCFC2-202ENST00000544223 OR11H7Q8NGC8 314 aa11.78□□□□□ -0.52
HCFC2-202ENST00000544223 HPSE2Q8WWQ2 592 aa11.78□□□□□ -0.52
HCFC2-202ENST00000544223 PPP1R14BQ96C90 147 aa11.78□□□□□ -0.52
HCFC2-202ENST00000544223 GPR137Q96N19 417 aa11.78□□□□□ -0.52
HCFC2-202ENST00000544223 SLC6A7Q99884 636 aa11.78□□□□□ -0.52
HCFC2-202ENST00000544223 ZNF221Q9UK13 617 aa11.78□□□□□ -0.52
HCFC2-202ENST00000544223 CDK2AP1O14519 115 aa11.77□□□□□ -0.53
HCFC2-202ENST00000544223 GEMIN2O14893 280 aaKnown RBP11.77□□□□□ -0.53
HCFC2-202ENST00000544223 TMEM127O75204 238 aa11.77□□□□□ -0.53
HCFC2-202ENST00000544223 ECDO95905 644 aaPredicted RBP11.77□□□□□ -0.53
HCFC2-202ENST00000544223 SERPINA5P05154 406 aa11.77□□□□□ -0.53
HCFC2-202ENST00000544223 CA6P23280 308 aa11.77□□□□□ -0.53
HCFC2-202ENST00000544223 DUSP1P28562 367 aa11.77□□□□□ -0.53
HCFC2-202ENST00000544223 HOXD11P31277 338 aaPredicted RBP11.77□□□□□ -0.53
HCFC2-202ENST00000544223 HRH1P35367 487 aa11.77□□□□□ -0.53
HCFC2-202ENST00000544223 RSU1Q15404 277 aa11.77□□□□□ -0.53
HCFC2-202ENST00000544223 Q6ZSR3 168 aa11.77□□□□□ -0.53
HCFC2-202ENST00000544223 SLC25A26Q70HW3 274 aa11.77□□□□□ -0.53
HCFC2-202ENST00000544223 BTN2A1Q7KYR7 527 aa11.77□□□□□ -0.53
HCFC2-202ENST00000544223 WNT2BQ93097 391 aa11.77□□□□□ -0.53
HCFC2-202ENST00000544223 ST6GALNAC5Q9BVH7 336 aa11.77□□□□□ -0.53
HCFC2-202ENST00000544223 GHITMQ9H3K2 345 aa11.77□□□□□ -0.53
HCFC2-202ENST00000544223 NUBP2Q9Y5Y2 271 aa11.77□□□□□ -0.53
HCFC2-202ENST00000544223 PKD1L2Q7Z442 2459 aa11.77□□□□□ -0.53
HCFC2-202ENST00000544223 ZNF816-ZNF321PA0A0X1KG74 233 aa11.77□□□□□ -0.53
HCFC2-202ENST00000544223 K7ENP7 123 aa11.77□□□□□ -0.53
HCFC2-202ENST00000544223 CYB5AP00167 134 aa11.77□□□□□ -0.53
HCFC2-202ENST00000544223 AMY2AP04746 511 aa11.77□□□□□ -0.53
HCFC2-202ENST00000544223 HAAOP46952 286 aa11.77□□□□□ -0.53
HCFC2-202ENST00000544223 RPS27AP62979 156 aaKnown RBP11.77□□□□□ -0.53
HCFC2-202ENST00000544223 NSUN5P2Q63ZY6 315 aa11.77□□□□□ -0.53
HCFC2-202ENST00000544223 TMEM42Q69YG0 159 aa11.77□□□□□ -0.53
HCFC2-202ENST00000544223 INO80CQ6PI98 192 aaPredicted RBP11.77□□□□□ -0.53
HCFC2-202ENST00000544223 OR51F2Q8NH61 342 aa11.77□□□□□ -0.53
HCFC2-202ENST00000544223 AKAP1Q92667 903 aaKnown RBP eCLIP11.77□□□□□ -0.53
HCFC2-202ENST00000544223 SNAPC3Q92966 411 aa11.77□□□□□ -0.53
HCFC2-202ENST00000544223 SLAMF9Q96A28 289 aa11.77□□□□□ -0.53
HCFC2-202ENST00000544223 SPSB4Q96A44 273 aa11.77□□□□□ -0.53
HCFC2-202ENST00000544223 APOBEC3DQ96AK3 386 aaPredicted RBP11.77□□□□□ -0.53
HCFC2-202ENST00000544223 FAAP24Q9BTP7 215 aa11.77□□□□□ -0.53
HCFC2-202ENST00000544223 PLSCR3Q9NRY6 295 aa11.77□□□□□ -0.53
HCFC2-202ENST00000544223 POLEQ07864 2286 aa11.76□□□□□ -0.53
HCFC2-202ENST00000544223 HSPB6O14558 160 aa11.76□□□□□ -0.53
HCFC2-202ENST00000544223 MSTNO14793 375 aa11.76□□□□□ -0.53
HCFC2-202ENST00000544223 XRCC2O43543 280 aa11.76□□□□□ -0.53
HCFC2-202ENST00000544223 WDR1O75083 606 aa11.76□□□□□ -0.53
HCFC2-202ENST00000544223 RAB3DO95716 219 aa11.76□□□□□ -0.53
HCFC2-202ENST00000544223 GSTT2BP0CG30 244 aa11.76□□□□□ -0.53
HCFC2-202ENST00000544223 VSIG10L2P0DP72 767 aa11.76□□□□□ -0.53
HCFC2-202ENST00000544223 BMP5P22003 454 aa11.76□□□□□ -0.53
HCFC2-202ENST00000544223 AP3S2P59780 193 aa11.76□□□□□ -0.53
HCFC2-202ENST00000544223 RRAS2P62070 204 aaPredicted RBP11.76□□□□□ -0.53
HCFC2-202ENST00000544223 MRPS10P82664 201 aaKnown RBP11.76□□□□□ -0.53
HCFC2-202ENST00000544223 HACD4Q5VWC8 232 aa11.76□□□□□ -0.53
HCFC2-202ENST00000544223 SIGIRRQ6IA17 410 aa11.76□□□□□ -0.53
HCFC2-202ENST00000544223 TMED4Q7Z7H5 227 aa11.76□□□□□ -0.53
HCFC2-202ENST00000544223 ZNF611Q8N823 705 aa11.76□□□□□ -0.53
HCFC2-202ENST00000544223 WDR31Q8NA23 367 aa11.76□□□□□ -0.53
HCFC2-202ENST00000544223 UXS1Q8NBZ7 420 aa11.76□□□□□ -0.53
HCFC2-202ENST00000544223 IGKV1D-8A0A087WSZ0 117 aa11.76□□□□□ -0.53
HCFC2-202ENST00000544223 CD300LBA8K4G0 201 aa11.76□□□□□ -0.53
HCFC2-202ENST00000544223 AHRRA9YTQ3 701 aa11.76□□□□□ -0.53
HCFC2-202ENST00000544223 ZNF736B4DX44 427 aaPredicted RBP11.76□□□□□ -0.53
HCFC2-202ENST00000544223 CSF1P09603 554 aa11.76□□□□□ -0.53
HCFC2-202ENST00000544223 AKAIN1P0CW23 69 aa11.76□□□□□ -0.53
HCFC2-202ENST00000544223 HIST1H1DP16402 221 aaKnown RBP11.76□□□□□ -0.53
HCFC2-202ENST00000544223 MALLQ13021 153 aa11.76□□□□□ -0.53
HCFC2-202ENST00000544223 ZNF474Q6S9Z5 364 aaPredicted RBP11.76□□□□□ -0.53
HCFC2-202ENST00000544223 FAM180AQ6UWF9 173 aa11.76□□□□□ -0.53
HCFC2-202ENST00000544223 IDO2Q6ZQW0 420 aa11.76□□□□□ -0.53
HCFC2-202ENST00000544223 FBXL14Q8N1E6 418 aa11.76□□□□□ -0.53
HCFC2-202ENST00000544223 PTX4Q96A99 478 aa11.76□□□□□ -0.53
HCFC2-202ENST00000544223 ASF1BQ9NVP2 202 aa11.76□□□□□ -0.53
HCFC2-202ENST00000544223 KCNN3Q9UGI6 736 aa11.76□□□□□ -0.53
HCFC2-202ENST00000544223 ZNF222Q9UK12 451 aa11.76□□□□□ -0.53
HCFC2-202ENST00000544223 SSUH2Q9Y2M2 353 aa11.76□□□□□ -0.53
HCFC2-202ENST00000544223 CFAP46Q8IYW2 2715 aa11.75□□□□□ -0.53
HCFC2-202ENST00000544223 SDCBPO00560 298 aaPredicted RBP11.75□□□□□ -0.53
HCFC2-202ENST00000544223 SYNGR1O43759 233 aa11.75□□□□□ -0.53
HCFC2-202ENST00000544223 DHFRP00374 187 aa11.75□□□□□ -0.53
HCFC2-202ENST00000544223 CGAP01215 116 aa11.75□□□□□ -0.53
HCFC2-202ENST00000544223 GNG2P59768 71 aa11.75□□□□□ -0.53
HCFC2-202ENST00000544223 ARFRP1Q13795 201 aa11.75□□□□□ -0.53
HCFC2-202ENST00000544223 KCNJ8Q15842 424 aa11.75□□□□□ -0.53
HCFC2-202ENST00000544223 FBXW5Q969U6 566 aa11.75□□□□□ -0.53
HCFC2-202ENST00000544223 SNRNP40Q96DI7 357 aaKnown RBP11.75□□□□□ -0.53
HCFC2-202ENST00000544223 CST11Q9H112 138 aa11.75□□□□□ -0.53
HCFC2-202ENST00000544223 OR51J1Q9H342 316 aa11.75□□□□□ -0.53
HCFC2-202ENST00000544223 CACNA1AO00555 2505 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms