RNA–Protein interactions for RNA: ENST00000543916.5

CD9-210, Transcript of CD9 molecule, humanhuman

TSL 1 (best)

Gene CD9, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-210ENST00000543916 ACSM1Q08AH1 577 aa12.65□□□□□ -0.38
CD9-210ENST00000543916 SPHARQ15513 63 aa12.65□□□□□ -0.38
CD9-210ENST00000543916 MED22Q15528 200 aa12.65□□□□□ -0.38
CD9-210ENST00000543916 TMEM155Q4W5P6 130 aa12.65□□□□□ -0.38
CD9-210ENST00000543916 CLEC9AQ6UXN8 241 aa12.65□□□□□ -0.38
CD9-210ENST00000543916 UTS2BQ765I0 119 aa12.65□□□□□ -0.38
CD9-210ENST00000543916 OR13C9Q8NGT0 318 aa12.65□□□□□ -0.38
CD9-210ENST00000543916 GPR148Q8TDV2 347 aa12.65□□□□□ -0.38
CD9-210ENST00000543916 TMEM165Q9HC07 324 aa12.65□□□□□ -0.38
CD9-210ENST00000543916 ZNF281Q9Y2X9 895 aa12.65□□□□□ -0.38
CD9-210ENST00000543916 PPIAL4AQ9Y536 164 aa12.65□□□□□ -0.38
CD9-210ENST00000543916 SRRM5B3KS81 715 aa12.64□□□□□ -0.39
CD9-210ENST00000543916 FAM157AC9JC47 383 aa12.64□□□□□ -0.39
CD9-210ENST00000543916 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.64□□□□□ -0.39
CD9-210ENST00000543916 PLPP2O43688 288 aa12.64□□□□□ -0.39
CD9-210ENST00000543916 FSTL3O95633 263 aa12.64□□□□□ -0.39
CD9-210ENST00000543916 SERPINA3P01011 423 aa12.64□□□□□ -0.39
CD9-210ENST00000543916 ZNF16P17020 682 aaPredicted RBP12.64□□□□□ -0.39
CD9-210ENST00000543916 ATF1P18846 271 aa12.64□□□□□ -0.39
CD9-210ENST00000543916 HAAOP46952 286 aa12.64□□□□□ -0.39
CD9-210ENST00000543916 CNN3Q15417 329 aaKnown RBP12.64□□□□□ -0.39
CD9-210ENST00000543916 ZNF404Q494X3 552 aa12.64□□□□□ -0.39
CD9-210ENST00000543916 SFRP4Q6FHJ7 346 aaPredicted RBP12.64□□□□□ -0.39
CD9-210ENST00000543916 ASPHD2Q6ICH7 369 aa12.64□□□□□ -0.39
CD9-210ENST00000543916 HAGHLQ6PII5 290 aaPredicted RBP12.64□□□□□ -0.39
CD9-210ENST00000543916 CALHM1Q8IU99 346 aa12.64□□□□□ -0.39
CD9-210ENST00000543916 PARP16Q8N5Y8 322 aa12.64□□□□□ -0.39
CD9-210ENST00000543916 DEFB108BQ8NET1 73 aa12.64□□□□□ -0.39
CD9-210ENST00000543916 AQP3Q92482 292 aa12.64□□□□□ -0.39
CD9-210ENST00000543916 MSI2Q96DH6 328 aaKnown RBP12.64□□□□□ -0.39
CD9-210ENST00000543916 SEH1LQ96EE3 360 aa12.64□□□□□ -0.39
CD9-210ENST00000543916 C1orf159Q96HA4 380 aa12.64□□□□□ -0.39
CD9-210ENST00000543916 TECTBQ96PL2 329 aa12.64□□□□□ -0.39
CD9-210ENST00000543916 TMEM246Q9BRR3 403 aa12.64□□□□□ -0.39
CD9-210ENST00000543916 SLC7A11Q9UPY5 501 aa12.64□□□□□ -0.39
CD9-210ENST00000543916 IGHV3OR15-7A0A075B7D8 119 aa12.63□□□□□ -0.39
CD9-210ENST00000543916 TRBV5-5A0A0J9YX44 114 aa12.63□□□□□ -0.39
CD9-210ENST00000543916 CEACAM18A8MTB9 384 aa12.63□□□□□ -0.39
CD9-210ENST00000543916 J3QT63 122 aa12.63□□□□□ -0.39
CD9-210ENST00000543916 LGALS8O00214 317 aa12.63□□□□□ -0.39
CD9-210ENST00000543916 AKR7A2O43488 359 aa12.63□□□□□ -0.39
CD9-210ENST00000543916 SYNGR1O43759 233 aa12.63□□□□□ -0.39
CD9-210ENST00000543916 CD5LO43866 347 aa12.63□□□□□ -0.39
CD9-210ENST00000543916 CD1AP06126 327 aa12.63□□□□□ -0.39
CD9-210ENST00000543916 HEXAP06865 529 aa12.63□□□□□ -0.39
CD9-210ENST00000543916 AZGP1P25311 298 aaKnown RBP12.63□□□□□ -0.39
CD9-210ENST00000543916 GZMKP49863 264 aa12.63□□□□□ -0.39
CD9-210ENST00000543916 FUT6P51993 359 aa12.63□□□□□ -0.39
CD9-210ENST00000543916 GMFBP60983 142 aa12.63□□□□□ -0.39
CD9-210ENST00000543916 TBCEQ15813 527 aaPredicted RBP12.63□□□□□ -0.39
CD9-210ENST00000543916 YIF1BQ5BJH7 314 aa12.63□□□□□ -0.39
CD9-210ENST00000543916 Q71RC1 249 aaPredicted RBP12.63□□□□□ -0.39
CD9-210ENST00000543916 RNF144BQ7Z419 303 aa12.63□□□□□ -0.39
CD9-210ENST00000543916 ANGPTL5Q86XS5 388 aa12.63□□□□□ -0.39
CD9-210ENST00000543916 ZNF573Q86YE8 665 aa12.63□□□□□ -0.39
CD9-210ENST00000543916 SERPINA12Q8IW75 414 aa12.63□□□□□ -0.39
CD9-210ENST00000543916 MUC20Q8N307 709 aaPredicted RBP12.63□□□□□ -0.39
CD9-210ENST00000543916 SPICQ8N5J4 248 aa12.63□□□□□ -0.39
CD9-210ENST00000543916 OR10Z1Q8NGY1 313 aa12.63□□□□□ -0.39
CD9-210ENST00000543916 TMEM106AQ96A25 262 aa12.63□□□□□ -0.39
CD9-210ENST00000543916 RAB39BQ96DA2 213 aa12.63□□□□□ -0.39
CD9-210ENST00000543916 YTHDF1Q9BYJ9 559 aaKnown RBP12.63□□□□□ -0.39
CD9-210ENST00000543916 WDR13Q9H1Z4 485 aa12.63□□□□□ -0.39
CD9-210ENST00000543916 ZCCHC4Q9H5U6 513 aa12.63□□□□□ -0.39
CD9-210ENST00000543916 PATZ1Q9HBE1 687 aaKnown RBP12.63□□□□□ -0.39
CD9-210ENST00000543916 OOEPA6NGQ2 149 aa12.62□□□□□ -0.39
CD9-210ENST00000543916 F5H0A9 414 aaPredicted RBP12.62□□□□□ -0.39
CD9-210ENST00000543916 OCM2P0CE71 109 aa12.62□□□□□ -0.39
CD9-210ENST00000543916 MPZP25189 248 aa12.62□□□□□ -0.39
CD9-210ENST00000543916 SEC61A1P61619 476 aaKnown RBP12.62□□□□□ -0.39
CD9-210ENST00000543916 TEX36Q5VZQ5 186 aa12.62□□□□□ -0.39
CD9-210ENST00000543916 CYB5R2Q6BCY4 276 aa12.62□□□□□ -0.39
CD9-210ENST00000543916 ZNF529Q6P280 563 aa12.62□□□□□ -0.39
CD9-210ENST00000543916 LYPD2Q6UXB3 125 aa12.62□□□□□ -0.39
CD9-210ENST00000543916 FAM90A1Q86YD7 464 aa12.62□□□□□ -0.39
CD9-210ENST00000543916 DNAAF1Q8NEP3 725 aa12.62□□□□□ -0.39
CD9-210ENST00000543916 ORAI1Q96D31 301 aa12.62□□□□□ -0.39
CD9-210ENST00000543916 BORCS8Q96FH0 119 aa12.62□□□□□ -0.39
CD9-210ENST00000543916 ZNF488Q96MN9 340 aa12.62□□□□□ -0.39
CD9-210ENST00000543916 OPALINQ96PE5 141 aa12.62□□□□□ -0.39
CD9-210ENST00000543916 SPACA5Q96QH8 159 aa12.62□□□□□ -0.39
CD9-210ENST00000543916 OR14A2Q96R54 314 aa12.62□□□□□ -0.39
CD9-210ENST00000543916 ACOT13Q9NPJ3 140 aa12.62□□□□□ -0.39
CD9-210ENST00000543916 TAS2R4Q9NYW5 299 aa12.62□□□□□ -0.39
CD9-210ENST00000543916 PCDHB10Q9UN67 800 aa12.62□□□□□ -0.39
CD9-210ENST00000543916 LRRC42Q9Y546 428 aa12.62□□□□□ -0.39
CD9-210ENST00000543916 TRAV38-1A0A0B4J264 116 aa12.61□□□□□ -0.39
CD9-210ENST00000543916 TNFRSF13BO14836 293 aaPredicted RBP12.61□□□□□ -0.39
CD9-210ENST00000543916 SULT1B1O43704 296 aa12.61□□□□□ -0.39
CD9-210ENST00000543916 PLATP00750 562 aa12.61□□□□□ -0.39
CD9-210ENST00000543916 GYPAP02724 150 aa12.61□□□□□ -0.39
CD9-210ENST00000543916 CD2P06729 351 aa12.61□□□□□ -0.39
CD9-210ENST00000543916 HSMCR30P0CW71 290 aa12.61□□□□□ -0.39
CD9-210ENST00000543916 PRKACBP22694 351 aa12.61□□□□□ -0.39
CD9-210ENST00000543916 RBP2P50120 134 aa12.61□□□□□ -0.39
CD9-210ENST00000543916 EMX1Q04741 257 aaPredicted RBP12.61□□□□□ -0.39
CD9-210ENST00000543916 Q499Y3 187 aa12.61□□□□□ -0.39
CD9-210ENST00000543916 CRIP3Q6Q6R5 217 aa12.61□□□□□ -0.39
CD9-210ENST00000543916 DCDC5Q6ZRR9 648 aa12.61□□□□□ -0.39
CD9-210ENST00000543916 BATF2Q8N1L9 274 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms