RNA–Protein interactions for RNA: ENST00000542002.5

YBX3-212, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-212ENST00000542002 ZNF488Q96MN9 340 aa8.09□□□□□ -1.11
YBX3-212ENST00000542002 HIST1H2AAQ96QV6 131 aa8.09□□□□□ -1.11
YBX3-212ENST00000542002 CCL13Q99616 98 aa8.09□□□□□ -1.11
YBX3-212ENST00000542002 ADI1Q9BV57 179 aa8.09□□□□□ -1.11
YBX3-212ENST00000542002 SSBP3Q9BWW4 388 aaPredicted RBP8.09□□□□□ -1.11
YBX3-212ENST00000542002 C7orf69Q9H7B7 122 aa8.09□□□□□ -1.11
YBX3-212ENST00000542002 FGF20Q9NP95 211 aaPredicted RBP8.09□□□□□ -1.11
YBX3-212ENST00000542002 C8orf4Q9NR00 106 aa8.09□□□□□ -1.11
YBX3-212ENST00000542002 SNTG1Q9NSN8 517 aa8.09□□□□□ -1.11
YBX3-212ENST00000542002 CLEC2DQ9UHP7 191 aa8.09□□□□□ -1.11
YBX3-212ENST00000542002 INSIG2Q9Y5U4 225 aa8.09□□□□□ -1.11
YBX3-212ENST00000542002 SIRT4Q9Y6E7 314 aaPredicted RBP8.09□□□□□ -1.11
YBX3-212ENST00000542002 JMJD1CQ15652 2540 aa8.09□□□□□ -1.11
YBX3-212ENST00000542002 TRAV38-1A0A0B4J264 116 aa8.08□□□□□ -1.12
YBX3-212ENST00000542002 IGKV1-9A0A0C4DH69 117 aa8.08□□□□□ -1.12
YBX3-212ENST00000542002 KIR2DS1A0A191URI9 304 aa8.08□□□□□ -1.12
YBX3-212ENST00000542002 LOC107986453A0A1B0GWG9 222 aa8.08□□□□□ -1.12
YBX3-212ENST00000542002 DHRS7CA6NNS2 312 aa8.08□□□□□ -1.12
YBX3-212ENST00000542002 H0YAE9 185 aa8.08□□□□□ -1.12
YBX3-212ENST00000542002 ADAM20O43506 726 aa8.08□□□□□ -1.12
YBX3-212ENST00000542002 SYNGR1O43759 233 aa8.08□□□□□ -1.12
YBX3-212ENST00000542002 FSHBP01225 129 aa8.08□□□□□ -1.12
YBX3-212ENST00000542002 ISG15P05161 165 aa8.08□□□□□ -1.12
YBX3-212ENST00000542002 SELLP14151 372 aa8.08□□□□□ -1.12
YBX3-212ENST00000542002 CPT2P23786 658 aa8.08□□□□□ -1.12
YBX3-212ENST00000542002 CAPGP40121 348 aa8.08□□□□□ -1.12
YBX3-212ENST00000542002 CCR9P51686 369 aa8.08□□□□□ -1.12
YBX3-212ENST00000542002 GNB2P62879 340 aa8.08□□□□□ -1.12
YBX3-212ENST00000542002 DOC2BQ14184 412 aa8.08□□□□□ -1.12
YBX3-212ENST00000542002 KLHL22Q53GT1 634 aa8.08□□□□□ -1.12
YBX3-212ENST00000542002 KLF17Q5JT82 389 aaPredicted RBP8.08□□□□□ -1.12
YBX3-212ENST00000542002 ATPAF1Q5TC12 328 aaPredicted RBP8.08□□□□□ -1.12
YBX3-212ENST00000542002 STUMQ69YW2 141 aa8.08□□□□□ -1.12
YBX3-212ENST00000542002 XAF1Q6GPH4 301 aa8.08□□□□□ -1.12
YBX3-212ENST00000542002 HAGHLQ6PII5 290 aaPredicted RBP8.08□□□□□ -1.12
YBX3-212ENST00000542002 FAM220AQ7Z4H9 259 aa8.08□□□□□ -1.12
YBX3-212ENST00000542002 CALHM1Q8IU99 346 aa8.08□□□□□ -1.12
YBX3-212ENST00000542002 BATF2Q8N1L9 274 aa8.08□□□□□ -1.12
YBX3-212ENST00000542002 OR8B3Q8NGG8 313 aa8.08□□□□□ -1.12
YBX3-212ENST00000542002 OR10Z1Q8NGY1 313 aa8.08□□□□□ -1.12
YBX3-212ENST00000542002 RAB40AQ8WXH6 277 aa8.08□□□□□ -1.12
YBX3-212ENST00000542002 OR8B2Q96RD0 313 aa8.08□□□□□ -1.12
YBX3-212ENST00000542002 JAM3Q9BX67 310 aa8.08□□□□□ -1.12
YBX3-212ENST00000542002 ABCB9Q9NP78 766 aa8.08□□□□□ -1.12
YBX3-212ENST00000542002 ERVK-18Q9QC07 812 aa8.08□□□□□ -1.12
YBX3-212ENST00000542002 LRCH1Q9Y2L9 728 aa8.08□□□□□ -1.12
YBX3-212ENST00000542002 SOX21Q9Y651 276 aaPredicted RBP8.08□□□□□ -1.12
YBX3-212ENST00000542002 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.08□□□□□ -1.124e-10■■■■■ 37.9
YBX3-212ENST00000542002 IGKV1D-17A0A075B6S4 117 aa8.07□□□□□ -1.12
YBX3-212ENST00000542002 IGHV2-70DA0A0C4DH43 119 aa8.07□□□□□ -1.12
YBX3-212ENST00000542002 A0A1B0GVI7 797 aa8.07□□□□□ -1.12
YBX3-212ENST00000542002 ANKRD61A6NGH8 418 aa8.07□□□□□ -1.12
YBX3-212ENST00000542002 OR5B21A6NL26 309 aa8.07□□□□□ -1.12
YBX3-212ENST00000542002 F8VVB4 439 aa8.07□□□□□ -1.12
YBX3-212ENST00000542002 F8VWA3 439 aa8.07□□□□□ -1.12
YBX3-212ENST00000542002 J3QLI3 93 aa8.07□□□□□ -1.12
YBX3-212ENST00000542002 DVL1O14640 695 aa8.07□□□□□ -1.12
YBX3-212ENST00000542002 TMPRSS2O15393 492 aa8.07□□□□□ -1.12
YBX3-212ENST00000542002 NDUFA2O43678 99 aa8.07□□□□□ -1.12
YBX3-212ENST00000542002 XPNPEP2O43895 674 aa8.07□□□□□ -1.12
YBX3-212ENST00000542002 ZFPL1O95159 310 aa8.07□□□□□ -1.12
YBX3-212ENST00000542002 LALBAP00709 142 aa8.07□□□□□ -1.12
YBX3-212ENST00000542002 HTR1AP08908 422 aa8.07□□□□□ -1.12
YBX3-212ENST00000542002 MUC1P15941 1255 aaPredicted RBP8.07□□□□□ -1.12
YBX3-212ENST00000542002 HNF1AP20823 631 aa8.07□□□□□ -1.12
YBX3-212ENST00000542002 GATA3P23771 443 aa8.07□□□□□ -1.12
YBX3-212ENST00000542002 SRP14P37108 136 aaKnown RBP8.07□□□□□ -1.12
YBX3-212ENST00000542002 HAAOP46952 286 aa8.07□□□□□ -1.12
YBX3-212ENST00000542002 TGM4P49221 684 aa8.07□□□□□ -1.12
YBX3-212ENST00000542002 AQP4P55087 323 aa8.07□□□□□ -1.12
YBX3-212ENST00000542002 ACTA2P62736 377 aa8.07□□□□□ -1.12
YBX3-212ENST00000542002 ACTG2P63267 376 aa8.07□□□□□ -1.12
YBX3-212ENST00000542002 IL18R1Q13478 541 aa8.07□□□□□ -1.12
YBX3-212ENST00000542002 ALKBH1Q13686 389 aaKnown RBP8.07□□□□□ -1.12
YBX3-212ENST00000542002 MICBQ29980 383 aa8.07□□□□□ -1.12
YBX3-212ENST00000542002 OR2G6Q5TZ20 316 aa8.07□□□□□ -1.12
YBX3-212ENST00000542002 CRIP3Q6Q6R5 217 aa8.07□□□□□ -1.12
YBX3-212ENST00000542002 SYS1Q8N2H4 156 aa8.07□□□□□ -1.12
YBX3-212ENST00000542002 FAM216BQ8N7L0 139 aa8.07□□□□□ -1.12
YBX3-212ENST00000542002 ZNF485Q8NCK3 441 aa8.07□□□□□ -1.12
YBX3-212ENST00000542002 ANGPTL6Q8NI99 470 aa8.07□□□□□ -1.12
YBX3-212ENST00000542002 TRMT10AQ8TBZ6 339 aaKnown RBP8.07□□□□□ -1.12
YBX3-212ENST00000542002 NPRL2Q8WTW4 380 aa8.07□□□□□ -1.12
YBX3-212ENST00000542002 RGP1Q92546 391 aaPredicted RBP8.07□□□□□ -1.12
YBX3-212ENST00000542002 FGGYQ96C11 551 aa8.07□□□□□ -1.12
YBX3-212ENST00000542002 PDCD1LG2Q9BQ51 273 aa8.07□□□□□ -1.12
YBX3-212ENST00000542002 INPP5EQ9NRR6 644 aa8.07□□□□□ -1.12
YBX3-212ENST00000542002 KAAG1Q9UBP8 84 aa8.07□□□□□ -1.12
YBX3-212ENST00000542002 CLN8Q9UBY8 286 aa8.07□□□□□ -1.12
YBX3-212ENST00000542002 FAM230AA0A1W2PPH8 454 aa8.06□□□□□ -1.12
YBX3-212ENST00000542002 RGS9O75916 674 aaPredicted RBP8.06□□□□□ -1.12
YBX3-212ENST00000542002 IFNA2P01563 188 aa8.06□□□□□ -1.12
YBX3-212ENST00000542002 UBCP0CG48 685 aaKnown RBP8.06□□□□□ -1.12
YBX3-212ENST00000542002 PSG2P11465 335 aa8.06□□□□□ -1.12
YBX3-212ENST00000542002 PCMT1P22061 227 aa8.06□□□□□ -1.12
YBX3-212ENST00000542002 MPZP25189 248 aa8.06□□□□□ -1.12
YBX3-212ENST00000542002 DCKP27707 260 aa8.06□□□□□ -1.12
YBX3-212ENST00000542002 C21orf33P30042 268 aaPredicted RBP8.06□□□□□ -1.12
YBX3-212ENST00000542002 ST3GAL4Q11206 333 aa8.06□□□□□ -1.12
YBX3-212ENST00000542002 KCNJ8Q15842 424 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms